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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100280g2.2299.mrna |
| Orig protein id | gnl|cribi|Naga_100280g2.2299 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:153156..155433 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6640 ID=rna6640|Name=rna6640|organism=Nannochloropsis gaditana|type=mRNA|length=1071bp
TGTCCGCGACTGGAACTGGCGCCAATACATCTCCCCATGATACAACATAC
ATAACAGGTGAAGAGCCTTTTGTGTAGCTTCCCATGCGTTTTTTAAACGC
AGCTCTCCACTATTGCGACCGGCAACTCGCTATCTGAAGCGTAAAAGACG
TAGCCATGATATCCGCCTCTTGATGGGACTTTGGCAGTTTCTTGCACGAT
AAAAGGTGACATAATTGAGCATGGCAACATTGGAGATGGAAAACTCGTCA
GTACACTTTCTAATTCAGGGCCTAAGGAGCAAAGATGCCCAAACTCGGAC
TCGTGCCGCCAAAGAGCTTCGCAGCTCGATGGAGTCCGCTTCCCGGAGTC
TGTCCATTGAGACTTTTGCCCGATTTGAACAAGACCTCTTCCAACGAGTA
TTTTCTCTGGTTCACGCGCCGGATTCGCCACTGTGGGAAAAGCTGGGCGG
GTTGGAGGCAATGGACGAACTCCTCGACGTCCCCTCCGCGGATACTGAGA
CCAAAGTGATCAAATTCGCCAACAAACTGTCCTTCTCACTACGATCCTCC
ATCGAATACGAATTTCTCCTCCAGGCATCCAGGACGCTGGGGCACCTCGC
CCGTTCCTCTGTAGTGCCCAACGCGGACTACGTGGAATTTGAAGTGGACC
GGGGGGTGGAATGGCTGTCGTCGGAGCAGTCCTCGCGTCGCTTGGCGGCT
TGCTTTGTCTTGAAAGAACTGGCCGCAAACGCGCCTACCTTGTTTTATGC
CAAGACGGGGGATTTCCTGGACAGGGTATGGGTGGCCCTACGGGACCAGA
AGCCCATCATCAGGTTGAATGCGGCGCGGGCCCTGAGTGGGTGCCTACGG
ATGCTGTCGACTAGGAGCGCGTTGAACCACGTTAATTGGTATTGCAAGGT
GTATGAACAGGTCCAAGTGGGTCTTCTGACCGGGCCGGGCAAGGGAGGGC
AGACGTCGGCCATGCATGGCTCCCTGCTGGTGGTGGGCGAGATGCTTTCC
TACACCGGTGATTTCATGGTGCCGCGCTTCCAGGTAGGGAGGGAGAGGCG
GGGGGGGGGGGGGGTGGGGGG back to topprotein sequence of rna6640 >rna6640-protein ID=rna6640-protein|Name=rna6640|organism=Nannochloropsis gaditana|type=polypeptide|length=315bp
MQEISRLSFIWRIFYAFEVFCSALPSMPRILSVAFVCCCYHASTSAFFLQ
PTLSTKMASITSVRQTAALEAGTSASLDDQADFVKAELARKKQEYDASLK
ARISASVANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYAL
YDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEIT
RDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQR
SEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQP
DSAVPDSKPSSKKTS back to topmRNA from alignment at CM002469.1:153156..155433- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6640 ID=rna6640|Name=rna6640|organism=Nannochloropsis gaditana|type=mRNA|length=2278bp|location=Sequence derived from alignment at CM002469.1:153156..155433- (Nannochloropsis gaditana)
ATGCAAGAGATCTCTCGTAAAGTGCACGCATGCCATGTCAAGGCTATTGT
GATGCTTGAGTATTGGTGCACGTGTCCTTGATTTTTTGAACAGGGCTTTT
GGGCGGGAAGGGGGGGCAGGGATGGGGCTGGCGGCCAGCGTCAGCTGTCG
CTCCGTCCGTCGCTAATTATGATGGAAAAGATACCCTCGCCCGTCATCTT
CAAGTCGTTCCTTACCGGTGGTTTTGGGGCTCACTCGCATTAAGAGGGCA
AGAAAATGCTTCACGTAAGTCCCTCACGACTTATTCTTTGGATTTTGATA
CAGGATTGTCATTTATTTGGCGGATATTTTACGCTTTTGAGGTCTTCTGT
TCTGCTCTTCCTTCGATGCCGCGCATCCTGTCCGTCGCTTTCGTGTGTTG
CTGCTATCATGCCTCAACAAGCGCATTTTTCTTGCAGCCAACCTTGTCCA
CGAAGATGGCCTCTATTACAAGCGTGCGCCAAACAGCGGCATTGGAAGCA
GGGACATCAGCCTCATTGGATGATCAAGCAGAGTACGTACTTGTTCGGCC
AATATCCACCCCTCCACATTCCTGTTTCTGGCTGAGTCTCGTCTTGTACT
TTTCGTAGATGAAGATCAGATGCATGGTTTGTTTAAGATACAAAACCATT
TGTTTACTTTGTGCTGTGTCTTCTTCAACCTTCGGCATTCTCCACGCGAT
TCTTGCTATTTGCCCTCATCCCTTCGGGCTAAGAAGTCACTTTCTTGCAT
TTAAATTCTTCCCACAATTCTAGCTTCGTGAAGGCAGAACTCGCTCGTAA
GAAGCAAGAATATGATGCCTCCCTAAAAGCGAGAATTTCTGCCTCCGTAG
CTAATGCAGACGTAGCCGACAGTATCCCGCCTCTTGATTCTCTCCCTTAT
GTGCCCTATTTGGATGAGACCGGTAAAATCAACGACTGCGGCGCTGATGC
TAAGGTGAAGGCGAGTGTATACGCACTGTATGATGAGAGCGAAACTGTGC
GATACATTGGTGTTTCCCGCTCCGTGACGCAAAGCCTGCGCTTGCACTTG
GCGCGGATGCCTGAACAGACCTACGGCTTCCGCGTTTATCACATTTCCAA
GCCGACCCGTGTCTTGTTGGAAATCACGCGCGATACGTGGGTCGATCAGC
TGGGCTACCAGCCTCAGGTATGTGCTTGCTTGAGGAGGTTCCTTTCTCTA
CTGTGTGGGTGGTGACGCGTGACGGAGTCGGGTGCACGGTGTCCACGCCA
GACTACTTGGGTATCTCTACGTGAAAGAGGCAAAAAGAGTTTTACATCAG
TACGAGGGAGAGATAAATGAAGGATTGTCTCCGGCGAACGAAGCACTTTG
CAGGTGGCTTCGTCTCAATTACTCCTTTCCTCTTCGTATACGCACTCCCT
CTTCCATGCAGGGCAACGATAACGGGCCAAATCAACAGCTTTGGGAGAGC
GCTTTGGATGTAAAACCTTTGATGAACGAAGCGGATCACGCAGCCCTAGG
TATGTGGGTATCCGTGGTGGGCGTTGCAAGAGCCTGGCCTTCTGTGTTTT
CCCTCTCGACGATGCGATCTCATTCCGTATATATTCCTCCCATGCCCCCT
TGTGATAGTGCTTTTTTTGAGTATAAACAATATCTTCCTATTACTTACCC
GGTCTAAATGAGACCGTCCTTGTTCCATTTCTATATTTTATTTATTTCCT
TTCACGCTGACCTTGACAGAAACTGCCCGCATCAAGCAGCGTTCCGAGGA
AAACGCAATGAAGAAAGTGACGCGCCGCTTCGAAGAGGCCAAAATATCTG
TTTTGAATGCCCGAGGTGTAACTGAGAGTCTTCGATTCGACCCCAAATTG
AAAGGAAAGGGGTTGCTGGATTTGTACTTAGAGAAGCAACCTGATTCAGC
GGTGCCTGATTCCAAGCCTTCATCGAAGAAAACGTCGTGAGAAAGCTGAC
TACAAGAATAATTAGAATACCAGAGCTTCGTGTGAAATGTCGAGAAGCTG
CAAAGAGTAAGGGGAACAAGGAGGAGTGGATTCCTGGAACAAGGGATATT
TTGGTTTTTGATTGGGTCATCAAAGGAATAGGAAAGGAGCGAAATGGCTT
TAAAGCTACCTCTTCAACCGGCAATATTAAATTGACAGCTTGCAAATTTC
AAAGTCCTTTGTCGCGCTGTACTTTTTCCTAATTTAAGAAATTCAAGGTT
GCTCCCCAAATTTCGACGCATTACTTCCTGCACGTCTATTCTACACAACT
GCCATCTCCAACAAAGAGTCAAAGACAT back to topCoding sequence (CDS) from alignment at CM002469.1:153156..155433- >rna6640 ID=rna6640|Name=rna6640|organism=Nannochloropsis gaditana|type=CDS|length=4740bp|location=Sequence derived from alignment at CM002469.1:153156..155433- (Nannochloropsis gaditana)
AAACTGCCCGCATCAAGCAGCGTTCCGAGGAAAACGCAATGAAGAAAGTG
ACGCGCCGCTTCGAAGAGGCCAAAATATCTGTTTTGAATGCCCGAGGTGT
AACTGAGAGTCTTCGATTCGACCCCAAATTGAAAGGAAAGGGGTTGCTGG
ATTTGTACTTAGAGAAGCAACCTGATTCAGCGGTGCCTGATTCCAAGCCT
TCATCGAAGAAAACGTCGTGAGGCAACGATAACGGGCCAAATCAACAGCT
TTGGGAGAGCGCTTTGGATGTAAAACCTTTGATGAACGAAGCGGATCACG
CAGCCCTAGCTTCGTGAAGGCAGAACTCGCTCGTAAGAAGCAAGAATATG
ATGCCTCCCTAAAAGCGAGAATTTCTGCCTCCGTAGCTAATGCAGACGTA
GCCGACAGTATCCCGCCTCTTGATTCTCTCCCTTATGTGCCCTATTTGGA
TGAGACCGGTAAAATCAACGACTGCGGCGCTGATGCTAAGGTGAAGGCGA
GTGTATACGCACTGTATGATGAGAGCGAAACTGTGCGATACATTGGTGTT
TCCCGCTCCGTGACGCAAAGCCTGCGCTTGCACTTGGCGCGGATGCCTGA
ACAGACCTACGGCTTCCGCGTTTATCACATTTCCAAGCCGACCCGTGTCT
TGTTGGAAATCACGCGCGATACGTGGGTCGATCAGCTGGGCTACCAGCCT
CAGGATTGTCATTTATTTGGCGGATATTTTACGCTTTTGAGGTCTTCTGT
TCTGCTCTTCCTTCGATGCCGCGCATCCTGTCCGTCGCTTTCGTGTGTTG
CTGCTATCATGCCTCAACAAGCGCATTTTTCTTGCAGCCAACCTTGTCCA
CGAAGATGGCCTCTATTACAAGCGTGCGCCAAACAGCGGCATTGGAAGCA
GGGACATCAGCCTCATTGGATGATCAAGCAGAATGCAAGAGATCTCTCAA
ACTGCCCGCATCAAGCAGCGTTCCGAGGAAAACGCAATGAAGAAAGTGAC
GCGCCGCTTCGAAGAGGCCAAAATATCTGTTTTGAATGCCCGAGGTGTAA
CTGAGAGTCTTCGATTCGACCCCAAATTGAAAGGAAAGGGGTTGCTGGAT
TTGTACTTAGAGAAGCAACCTGATTCAGCGGTGCCTGATTCCAAGCCTTC
ATCGAAGAAAACGTCGTGAGGCAACGATAACGGGCCAAATCAACAGCTTT
GGGAGAGCGCTTTGGATGTAAAACCTTTGATGAACGAAGCGGATCACGCA
GCCCTAGCTTCGTGAAGGCAGAACTCGCTCGTAAGAAGCAAGAATATGAT
GCCTCCCTAAAAGCGAGAATTTCTGCCTCCGTAGCTAATGCAGACGTAGC
CGACAGTATCCCGCCTCTTGATTCTCTCCCTTATGTGCCCTATTTGGATG
AGACCGGTAAAATCAACGACTGCGGCGCTGATGCTAAGGTGAAGGCGAGT
GTATACGCACTGTATGATGAGAGCGAAACTGTGCGATACATTGGTGTTTC
CCGCTCCGTGACGCAAAGCCTGCGCTTGCACTTGGCGCGGATGCCTGAAC
AGACCTACGGCTTCCGCGTTTATCACATTTCCAAGCCGACCCGTGTCTTG
TTGGAAATCACGCGCGATACGTGGGTCGATCAGCTGGGCTACCAGCCTCA
GGATTGTCATTTATTTGGCGGATATTTTACGCTTTTGAGGTCTTCTGTTC
TGCTCTTCCTTCGATGCCGCGCATCCTGTCCGTCGCTTTCGTGTGTTGCT
GCTATCATGCCTCAACAAGCGCATTTTTCTTGCAGCCAACCTTGTCCACG
AAGATGGCCTCTATTACAAGCGTGCGCCAAACAGCGGCATTGGAAGCAGG
GACATCAGCCTCATTGGATGATCAAGCAGAATGCAAGAGATCTCTCAAAC
TGCCCGCATCAAGCAGCGTTCCGAGGAAAACGCAATGAAGAAAGTGACGC
GCCGCTTCGAAGAGGCCAAAATATCTGTTTTGAATGCCCGAGGTGTAACT
GAGAGTCTTCGATTCGACCCCAAATTGAAAGGAAAGGGGTTGCTGGATTT
GTACTTAGAGAAGCAACCTGATTCAGCGGTGCCTGATTCCAAGCCTTCAT
CGAAGAAAACGTCGTGAGGCAACGATAACGGGCCAAATCAACAGCTTTGG
GAGAGCGCTTTGGATGTAAAACCTTTGATGAACGAAGCGGATCACGCAGC
CCTAGCTTCGTGAAGGCAGAACTCGCTCGTAAGAAGCAAGAATATGATGC
CTCCCTAAAAGCGAGAATTTCTGCCTCCGTAGCTAATGCAGACGTAGCCG
ACAGTATCCCGCCTCTTGATTCTCTCCCTTATGTGCCCTATTTGGATGAG
ACCGGTAAAATCAACGACTGCGGCGCTGATGCTAAGGTGAAGGCGAGTGT
ATACGCACTGTATGATGAGAGCGAAACTGTGCGATACATTGGTGTTTCCC
GCTCCGTGACGCAAAGCCTGCGCTTGCACTTGGCGCGGATGCCTGAACAG
ACCTACGGCTTCCGCGTTTATCACATTTCCAAGCCGACCCGTGTCTTGTT
GGAAATCACGCGCGATACGTGGGTCGATCAGCTGGGCTACCAGCCTCAGG
ATTGTCATTTATTTGGCGGATATTTTACGCTTTTGAGGTCTTCTGTTCTG
CTCTTCCTTCGATGCCGCGCATCCTGTCCGTCGCTTTCGTGTGTTGCTGC
TATCATGCCTCAACAAGCGCATTTTTCTTGCAGCCAACCTTGTCCACGAA
GATGGCCTCTATTACAAGCGTGCGCCAAACAGCGGCATTGGAAGCAGGGA
CATCAGCCTCATTGGATGATCAAGCAGAATGCAAGAGATCTCTCAAACTG
CCCGCATCAAGCAGCGTTCCGAGGAAAACGCAATGAAGAAAGTGACGCGC
CGCTTCGAAGAGGCCAAAATATCTGTTTTGAATGCCCGAGGTGTAACTGA
GAGTCTTCGATTCGACCCCAAATTGAAAGGAAAGGGGTTGCTGGATTTGT
ACTTAGAGAAGCAACCTGATTCAGCGGTGCCTGATTCCAAGCCTTCATCG
AAGAAAACGTCGTGAGGCAACGATAACGGGCCAAATCAACAGCTTTGGGA
GAGCGCTTTGGATGTAAAACCTTTGATGAACGAAGCGGATCACGCAGCCC
TAGCTTCGTGAAGGCAGAACTCGCTCGTAAGAAGCAAGAATATGATGCCT
CCCTAAAAGCGAGAATTTCTGCCTCCGTAGCTAATGCAGACGTAGCCGAC
AGTATCCCGCCTCTTGATTCTCTCCCTTATGTGCCCTATTTGGATGAGAC
CGGTAAAATCAACGACTGCGGCGCTGATGCTAAGGTGAAGGCGAGTGTAT
ACGCACTGTATGATGAGAGCGAAACTGTGCGATACATTGGTGTTTCCCGC
TCCGTGACGCAAAGCCTGCGCTTGCACTTGGCGCGGATGCCTGAACAGAC
CTACGGCTTCCGCGTTTATCACATTTCCAAGCCGACCCGTGTCTTGTTGG
AAATCACGCGCGATACGTGGGTCGATCAGCTGGGCTACCAGCCTCAGGAT
TGTCATTTATTTGGCGGATATTTTACGCTTTTGAGGTCTTCTGTTCTGCT
CTTCCTTCGATGCCGCGCATCCTGTCCGTCGCTTTCGTGTGTTGCTGCTA
TCATGCCTCAACAAGCGCATTTTTCTTGCAGCCAACCTTGTCCACGAAGA
TGGCCTCTATTACAAGCGTGCGCCAAACAGCGGCATTGGAAGCAGGGACA
TCAGCCTCATTGGATGATCAAGCAGAATGCAAGAGATCTCTCAAACTGCC
CGCATCAAGCAGCGTTCCGAGGAAAACGCAATGAAGAAAGTGACGCGCCG
CTTCGAAGAGGCCAAAATATCTGTTTTGAATGCCCGAGGTGTAACTGAGA
GTCTTCGATTCGACCCCAAATTGAAAGGAAAGGGGTTGCTGGATTTGTAC
TTAGAGAAGCAACCTGATTCAGCGGTGCCTGATTCCAAGCCTTCATCGAA
GAAAACGTCGTGAGGCAACGATAACGGGCCAAATCAACAGCTTTGGGAGA
GCGCTTTGGATGTAAAACCTTTGATGAACGAAGCGGATCACGCAGCCCTA
GCTTCGTGAAGGCAGAACTCGCTCGTAAGAAGCAAGAATATGATGCCTCC
CTAAAAGCGAGAATTTCTGCCTCCGTAGCTAATGCAGACGTAGCCGACAG
TATCCCGCCTCTTGATTCTCTCCCTTATGTGCCCTATTTGGATGAGACCG
GTAAAATCAACGACTGCGGCGCTGATGCTAAGGTGAAGGCGAGTGTATAC
GCACTGTATGATGAGAGCGAAACTGTGCGATACATTGGTGTTTCCCGCTC
CGTGACGCAAAGCCTGCGCTTGCACTTGGCGCGGATGCCTGAACAGACCT
ACGGCTTCCGCGTTTATCACATTTCCAAGCCGACCCGTGTCTTGTTGGAA
ATCACGCGCGATACGTGGGTCGATCAGCTGGGCTACCAGCCTCAGGATTG
TCATTTATTTGGCGGATATTTTACGCTTTTGAGGTCTTCTGTTCTGCTCT
TCCTTCGATGCCGCGCATCCTGTCCGTCGCTTTCGTGTGTTGCTGCTATC
ATGCCTCAACAAGCGCATTTTTCTTGCAGCCAACCTTGTCCACGAAGATG
GCCTCTATTACAAGCGTGCGCCAAACAGCGGCATTGGAAGCAGGGACATC
AGCCTCATTGGATGATCAAGCAGAATGCAAGAGATCTCTC back to top
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