EWM24050.1, cds6624 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24050.1 vs. NCBI_GenBank
Match: gi|585105341|gb|EWM24050.1| (hypothetical protein Naga_100280g2 [Nannochloropsis gaditana]) HSP 1 Score: 652.899 bits (1683), Expect = 0.000e+0 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 Query: 1 MQEISRLSFIWRIFYAFEVFCSALPSMPRILSVAFVCCCYHASTSAFFLQPTLSTKMASITSVRQTAALEAGTSASLDDQADFVKAELARKKQEYDASLKARISASVANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVPDSKPSSKKTS 315 MQEISRLSFIWRIFYAFEVFCSALPSMPRILSVAFVCCCYHASTSAFFLQPTLSTKMASITSVRQTAALEAGTSASLDDQADFVKAELARKKQEYDASLKARISASVANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVPDSKPSSKKTS Sbjct: 1 MQEISRLSFIWRIFYAFEVFCSALPSMPRILSVAFVCCCYHASTSAFFLQPTLSTKMASITSVRQTAALEAGTSASLDDQADFVKAELARKKQEYDASLKARISASVANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVPDSKPSSKKTS 315
BLAST of EWM24050.1 vs. NCBI_GenBank
Match: gi|553185609|ref|XP_005854275.1| (protein atypical group [Nannochloropsis gaditana CCMP526] >gi|422294780|gb|EKU22080.1| protein atypical group [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 597.43 bits (1539), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 27 MPRILSVAFVCCCYHASTSAFFLQPTLSTKMASITSVRQTAALEAGTSASLDDQADFVKAELARKKQEYDASLKARISASVANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVPDSKPSSKKTS 315 MPRILSVAFVCCCYHASTSAFFLQPTLSTKMASITSVRQTAALEAGTSASLDDQADFVKAELARKKQEYDASLKARISASVANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVPDSKPSSKKTS Sbjct: 1 MPRILSVAFVCCCYHASTSAFFLQPTLSTKMASITSVRQTAALEAGTSASLDDQADFVKAELARKKQEYDASLKARISASVANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVPDSKPSSKKTS 289
BLAST of EWM24050.1 vs. NCBI_GenBank
Match: gi|298712738|emb|CBJ33337.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 211.46 bits (537), Expect = 2.460e-63 Identity = 123/285 (43.16%), Postives = 180/285 (63.16%), Query Frame = 0 Query: 42 ASTSAFFLQPTLSTKMASITSV----------------RQTAALEAGTSASLDDQADFVKAELARKKQEYDASLKARISA----SVANADVADSIPPLDSLPYVPYLDETGKINDCGADAK-VKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVP 305 +T AF + LS + A+ ++ R++A L T++ LD A++VKAELAR ++EY+A+ KA+I + A D A + PL L + +LD+ GK+ D K VKASVYA+YDES+T+RYIGVSR + QSLRL LAR P+ TY F+V +I++P+R LLEI +++W+++ G P GN + +Q +WE A++V PL E D A + + K + E+ +KK+ RFE + +L RGV ES+RFDPKLKG+GLLD+ + K PDS+VP Sbjct: 13 GNTRAFLVSAPLSGRTAAAAAMGTSSVCRAEDWAGFARRRSAGLCMATNSELDQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAA--VTPLADLEFHSFLDKDGKV--ASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPKDTYYFKVQNITRPSRSLLEIIKESWIEENGSTPDGNADEASQAVWEHAINVVPLFTEEDLAVVAEWKEKGK-EDRGLKKIAGRFENEILEILEERGVKESIRFDPKLKGRGLLDVKMPK-PDSSVP 291
BLAST of EWM24050.1 vs. NCBI_GenBank
Match: gi|873223495|emb|CEM28487.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 190.274 bits (482), Expect = 9.052e-56 Identity = 105/237 (44.30%), Postives = 143/237 (60.34%), Query Frame = 0 Query: 81 ADFVKAELARKKQEYDASLKARISASV----ANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVPDSKPSSKK 313 +++ K +L K+ Y L+ R+ A A+ DV SIP L SLP +PYL GK+ VKASVYA+YDE +T++++GV+RS+ QSL LHLARMP+ T+ +V+HI +P R LLE+ + +W+D+ G P GN P+Q+LWE LD+KPLM + D K + N +V RR+E K VL AR VTE +RFDPKLK +GL DL + K P VP P K Sbjct: 6 SEYTKQQLKEKESRYHHELQQRLKAETDRLRASGDV--SIPSLSSLPLMPYLTPDGKVTSADVTPGVKASVYAIYDEGKTLQHVGVTRSIRQSLLLHLARMPQLTHYVKVHHILRPNRSLLELIKQSWLDESGNIPPGN-RPPDQELWEHPLDIKPLMTDEDRERYAEKEQKGKG-FNVYLEVARRYEAEKKEVLEARHVTEEVRFDPKLKRQGLSDLLIPK-PKDEVPTGAPRQNK 237
BLAST of EWM24050.1 vs. NCBI_GenBank
Match: gi|971509082|dbj|GAQ89125.1| (hypothetical protein KFL_004890080 [Klebsormidium nitens]) HSP 1 Score: 189.504 bits (480), Expect = 1.550e-54 Identity = 96/192 (50.00%), Postives = 127/192 (66.15%), Query Frame = 0 Query: 116 IPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLY-LEKQPDSAVPD 306 + PL LP VP+L E GKI DC + A KASVYA++DE + VR++G+SR++ SLRLH AR+P Q + +V HI P R LE RD W+ +LGY+P GNDNGP Q WE+ LDV+PLM + + AA+E A + + A+K+V RR E + AR TESLRFDPKLK KG+LD+ PD+ VP+ Sbjct: 118 VTPLAELPLVPFLTEEGKIADC-SQADAKASVYAIFDEEKVVRHVGISRAIGPSLRLHFARVPLQCWAVKVQHIKAPRRSALEAIRDAWIAELGYRPTGNDNGPEQNRWENPLDVRPLMTDDEKAAVEEAAPGPPTAK-ALKQVARRVEAELKASYAARQSTESLRFDPKLKEKGMLDVKNPAPPPDTKVPE 307
BLAST of EWM24050.1 vs. NCBI_GenBank
Match: gi|168033848|ref|XP_001769426.1| (predicted protein [Physcomitrella patens] >gi|162679346|gb|EDQ65795.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 174.866 bits (442), Expect = 5.368e-49 Identity = 97/236 (41.10%), Postives = 136/236 (57.63%), Query Frame = 0 Query: 75 ASLDDQADFVKAELARKKQEYDASLKARISASVANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLY-LEKQPDSAVPDSKP 309 A+ D+ + + A+ ++EY A S+ + L SL Y+PYL E G I DC + KAS+YA++DE++T+ +IG+SR V QS+RLH AR P Q Y +V H+SKP+R LLE TRD W+ + G P GNDNG Q LWE+ALD P M + + E A + +K V RR E+ + R T+ LRFDPKLK + LLDL + +PD++VP + P Sbjct: 75 AAADEHQERTRQATAQAQEEYRKRQDALRRQSMQGGEGVS----LSSLEYIPYLTEEGHIADC-TEPGAKASLYAIFDENKTLCFIGISRQVYQSMRLHFARRPLQCYYVKVMHVSKPSRALLEGTRDAWISENGSVPVGNDNGEIQNLWENALDCTPFMTDEEKLLHEEA-APGPPKAKVLKNVARRIEKDLEGIFKQRNCTDVLRFDPKLKDRCLLDLKGVAVKPDTSVPTATP 304
BLAST of EWM24050.1 vs. NCBI_GenBank
Match: gi|1026765888|gb|OAE26517.1| (hypothetical protein AXG93_1406s1090 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 169.474 bits (428), Expect = 1.195e-46 Identity = 88/196 (44.90%), Postives = 122/196 (62.24%), Query Frame = 0 Query: 119 LDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLY-LEKQPDSAVPDSKPSSKK 313 LDS+ Y PYL E G I D +KASVYA++D+++T++Y+GV+R V QS+RLH AR P + + +V H+S+P+R LLE RD W+ G P GNDNG Q WE+ LD K M + + LE A + +K V RR E+ ++ R T+ LRF+PKLK +GLLDL + +PDS+VP S P SK+ Sbjct: 138 LDSMEYTPYLTEEGLIADI-TKPDIKASVYAIFDDAKTLQYVGVTRQVYQSMRLHFARFPSKCFYVKVQHLSRPSRALLEGIRDQWIADNGSPPPGNDNGEMQNRWENPLDCKVFMTDEEMRLLEEA-APGPPKAAVLKNVARRIEKTLMAAFEERKCTDKLRFEPKLKDRGLLDLKGVVIKPDSSVPTSTPKSKE 331
BLAST of EWM24050.1 vs. NCBI_GenBank
Match: gi|938301257|gb|KPQ34798.1| (GIY-YIG catalytic domain [Phormidium sp. OSCR]) HSP 1 Score: 149.058 bits (375), Expect = 1.289e-40 Identity = 81/182 (44.51%), Postives = 110/182 (60.44%), Query Frame = 0 Query: 113 ADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDL 294 A +P L SL PYL E G + D KV +YA++D ET++++G SR+V+ SLR HL R PEQ Y FRV I +P+R LLE R W+ + G P G NG Q W +DVKPLM +A+ +A E A + + + +K+V RR + + L ARGV ES RF+PKLK +GLL+L Sbjct: 4 AAELPSLHSLTLHPYLTENGDVADEFLVGKV--GIYAIFDNEETLQFVGYSRNVSVSLRQHLIRQPEQCYSFRVETIDRPSRTLLEDIRQKWLTENGTIPPG--NGEAQAQWTQPIDVKPLMTDAERSAFEEA-LDEGKKTKCIKQVARRVQATVLERLAARGVMESFRFNPKLKEQGLLEL 180
BLAST of EWM24050.1 vs. NCBI_GenBank
Match: gi|516255936|ref|WP_017659899.1| (hypothetical protein [Geitlerinema sp. PCC 7105]) HSP 1 Score: 147.517 bits (371), Expect = 5.428e-40 Identity = 78/183 (42.62%), Postives = 109/183 (59.56%), Query Frame = 0 Query: 112 VADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDL 294 V +PPL SLP PYLDE GKI D D K K YA++D+ +T++YIG SR + SLR HL R P Q Y F++ I +P R +LE+ R W+ + P GN + + LW + +DVKP ++ + A+ A + + S+ +KK RR E ++ L+ RG TE LRF+PKLK G LDL Sbjct: 3 VQTDLPPLSSLPARPYLDEGGKIPD--GDVKGKIGAYAVFDDRDTLQYIGYSRDIALSLRQHLVRRPHQCYSFKIQTIDRPDRKVLEMLRQAWIAENSTTPPGNSD--EEALWVNPIDVKPRLSPEERDAIANA-VDEISKIKCLKKAARRVESEILAELSDRGATEPLRFNPKLKENGFLDL 180
BLAST of EWM24050.1 vs. NCBI_GenBank
Match: gi|763335916|ref|WP_044194246.1| (Nuclease subunit of the excinuclease complex [Oscillatoria acuminata]) HSP 1 Score: 146.362 bits (368), Expect = 1.677e-39 Identity = 73/179 (40.78%), Postives = 111/179 (62.01%), Query Frame = 0 Query: 116 IPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDL 294 I PL +L ++PYLD+ G +C +D K VYA++D +T++YIG SR + SL+ HL R P Y + I +P+R +LE R W+ + G P G NGP++ W A+DVKPLM + + E + I + ++ +K+V+RR E ++VL +RG+ E++RF+PKLK GLLDL Sbjct: 7 ISPLSTLEFLPYLDDQG---NCNSDFTGKVGVYAIFDGEKTLQYIGYSRDIVLSLKQHLMRKPNSCYWIKAQTIERPSRTILEEIRAAWIAENGQTPLG--NGPDEGQWTQAIDVKPLMTDEEREKYEKS-IDEFTQMKLLKQVSRRVEADLLAVLESRGLKEAIRFNPKLKESGLLDL 179 The following BLAST results are available for this feature:
BLAST of EWM24050.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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