EWM24072.1, cds6597 (CDS) Nannochloropsis gaditana

Overview
NameEWM24072.1
Unique Namecds6597
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:77637..77641 +
Alignment locationCM002469.1:77840..78056 +
Alignment locationCM002469.1:78189..78778 +
Alignment locationCM002469.1:78984..79485 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24072.1
ProductBeta-glucan synthesis-associated, SKN1
Orig transcript idgnl|cribi|Naga_100063g1.3897.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:77637..77641 +
CM002469.1supercontigCM002469.1:77840..78056 +
CM002469.1supercontigCM002469.1:78189..78778 +
CM002469.1supercontigCM002469.1:78984..79485 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom
IPR005629SKN1
Homology
BLAST of EWM24072.1 vs. NCBI_GenBank
Match: gi|585105364|gb|EWM24072.1| (Beta-glucan synthesis-associated, SKN1 [Nannochloropsis gaditana])

HSP 1 Score: 914.45 bits (2362), Expect = 0.000e+0
Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
Query:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDHEKVPLKPVHRGKGKCANNADCNPGGSCNRRRKCVCHDGWTGPQYGGREGGREGGREGGKGGTGEGNKREKTRGTCVNGEKGDECGRGRKADTGTHVLMIWRAMPPLIFLPCLFLSFILPSLPPPSSLPAANKKTTTTTTCGEGFSSTFNFQVAFLPAWSLPSPL 437
            MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDHEKVPLKPVHRGKGKCANNADCNPGGSCNRRRKCVCHDGWTGPQYGGREGGREGGREGGKGGTGEGNKREKTRGTCVNGEKGDECGRGRKADTGTHVLMIWRAMPPLIFLPCLFLSFILPSLPPPSSLPAANKKTTTTTTCGEGFSSTFNFQVAFLPAWSLPSPL
Sbjct:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDHEKVPLKPVHRGKGKCANNADCNPGGSCNRRRKCVCHDGWTGPQYGGREGGREGGREGGKGGTGEGNKREKTRGTCVNGEKGDECGRGRKADTGTHVLMIWRAMPPLIFLPCLFLSFILPSLPPPSSLPAANKKTTTTTTCGEGFSSTFNFQVAFLPAWSLPSPL 437          
BLAST of EWM24072.1 vs. NCBI_GenBank
Match: gi|553194947|ref|XP_005856060.1| (beta-glucan synthesis-associated [Nannochloropsis gaditana CCMP526] >gi|422293006|gb|EKU20307.1| beta-glucan synthesis-associated [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0
Identity = 270/314 (85.99%), Postives = 270/314 (85.99%), Query Frame = 0
Query:    2 SACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQ--------------------------------------------EEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQR 271
            SACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQ                                            EEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQR
Sbjct:   93 SACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQVSLESPRGVRRPRAPSRTCLPPSPLRTVLPFGVSQDLSNLSTGQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQR 406          
BLAST of EWM24072.1 vs. NCBI_GenBank
Match: gi|299470105|emb|CBN78134.1| (Beta-1,6-glucan active enzyme, family GH16 [Ectocarpus siliculosus])

HSP 1 Score: 300.827 bits (769), Expect = 8.392e-92
Identity = 147/324 (45.37%), Postives = 208/324 (64.20%), Query Frame = 0
Query:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLG-VGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMP--------GPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDHEKVPLKPVHRGKGKCANNADCNPGGSCNRRRKCVCHDGWTGP 315
            +SAC++  H+ +   QGRG+TEIDI+EA  G         +LG V  PY+S+TLQ++PG+  +RP  G+  +    E TWY+G++F + S +N +FYG  +DKT   EP  R   Q Y ADA+S LTSL+ TH+ ++H Y+LEW+P        GP G+L WY+D EM+  + A  +    G QIP EPSYVILNTAVS++WGFP+ CP+GC C C+DC  P C C +P G C+ LP+  ++D+VR+YQ ++D    +GC+ P  P++ FI+AHR+RY R  +K PLK +  G GKC +   C+  G C+   KC C +GW GP
Sbjct:  287 ISACNKINHFGMHGYQGRGSTEIDILEAQPGTSDDPLL--NLGKVNSPYLSTTLQLAPGIPVHRPTNGELLSP---ENTWYEGMQFAQNSSLNYHFYGMHVDKTTPQEPVYRGADQAYIADAISGLTSLTHTHFHEYHNYKLEWVPPPPTRGDAGPRGHLKWYIDDEMVLGIDAETVEK-HGTQIPNEPSYVILNTAVSSSWGFPDPCPSGCDCACYDCKDPACHCAIPNGFCDMLPSYFMIDHVRVYQNKNDSSMSIGCDIPSHPSKLFIEAHRYRYMRTGDKKPLKDLMVGGGKCNDETGCHR-GRCH-WGKCKCEEGWVGP 602          
BLAST of EWM24072.1 vs. NCBI_GenBank
Match: gi|397638563|gb|EJK73120.1| (hypothetical protein THAOC_05273 [Thalassiosira oceanica])

HSP 1 Score: 268.47 bits (685), Expect = 2.919e-80
Identity = 138/325 (42.46%), Postives = 195/325 (60.00%), Query Frame = 0
Query:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFG-EKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPE----GYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDH--EKVPLKPVHRGKGKCANNADCN--PGGSCNRRRKCVCHDGWTGPQ 316
            +SAC +  H+ ++   GRG+ EIDI+EAM G P K+    +  +  PY SS+LQ++PG+E  RP  GK      ++  WY+GL +G   +++N +FYG  L+   K           YQ+DA+SA T +   ++   H YR+EW P  +    GYL WYLD + LY +  S L   T  +IP EP Y+I+NTAV+++WGFP+ CP GC C C++C  PEC CGLP+G C++ PAS  ++YVR YQ +D+ RH LGC+    PT +FIQ H   Y      +KVPL PV RG G C  ++DC     G C+ RR C C + +TGP+
Sbjct:  177 ISACSKVGHYGMRPGVGRGSPEIDILEAMMGSPEKLP---NTNITRPYFSSSLQIAPGLEGVRPVLGK----LPKKGHWYEGLEYGSNNTQLNPFFYGVTLEHKPK--------AMTYQSDAISANTHVGKEYFTSMHKYRVEWEPPSQDSTGGYLKWYLDDKFLYGISGSNL-KFTNTEIPSEPMYLIMNTAVASSWGFPKPCPEGCDCKCYECGNPECACGLPDGYCKNFPASFEIEYVRAYQAKDESRHLLGCSTENRPTAQFIQGHLKDYSNTEVGQKVPLLPVQRGGGLCGKDSDCGGPHSGQCSDRR-CACSEDFTGPR 484          
BLAST of EWM24072.1 vs. NCBI_GenBank
Match: gi|676381457|ref|XP_009034007.1| (hypothetical protein AURANDRAFT_70840 [Aureococcus anophagefferens] >gi|323455795|gb|EGB11663.1| hypothetical protein AURANDRAFT_70840 [Aureococcus anophagefferens])

HSP 1 Score: 259.996 bits (663), Expect = 4.014e-75
Identity = 145/338 (42.90%), Postives = 197/338 (58.28%), Query Frame = 0
Query:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDL--GVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDHE--KVPLKPVHRGKGKCANNADC--NPGGSCNRRRKCVCHDGWTGPQYGGREGGREGGREGGK 332
            ++ C    H+ L  +QGRGA EID++E M G+       G L  G+  PY S++LQ++P     RP  G          TWY+ LR+G  +  N++FYG  LD    +E         Y ADAVS  T + A+ +EDFHTYRLEW P  +G + WY DG+ LY +  +++S++TG Q+P EP Y++LNTA+S+TWGFP  CP GCAC C DCA+ +C CG+  G C SLPAS LVDYVR+YQ   D    LGC+    P++ FI+AH  RY       + PL+ V  G G+CA + DC   P G+C RRR+C C  G  GP+     G  +  R  G+
Sbjct:  465 INGCMPRPHFGLNPDQGRGAPEIDLLEVMPGE-------GWLPWGLKKPYYSTSLQLAPAAPI-RPFNGAK----PAPGTWYEHLRYGPNTSQNVFFYGMRLDHGSDEES--------YWADAVSGNTPIGASEFEDFHTYRLEWKP--KGSIDWYKDGKFLYGIDDASISSLTGGQVPDEPMYLLLNTAMSSTWGFPAPCPPGCACDCQDCAEEKCACGIAPGFCASLPASFLVDYVRVYQDRGDRAASLGCDTASHPSKAFIEAHEHRYVDPDRPGRAPLERVATGGGRCATDDDCGGRPAGAC-RRRRCACGAGRAGPRCLAPAGADDARRGRGR 779          
BLAST of EWM24072.1 vs. NCBI_GenBank
Match: gi|1210515108|dbj|GAX26071.1| (hypothetical protein FisN_4Hh425 [Fistulifera solaris])

HSP 1 Score: 252.677 bits (644), Expect = 9.214e-75
Identity = 133/326 (40.80%), Postives = 183/326 (56.13%), Query Frame = 0
Query:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSK----MNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMP----GPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDHEKVPLKPVHRGKGKCANNADC--NPGGSCNRRRKCVCHDGWTGPQ 316
            + AC +  H+ +Q   GRGA EIDI+EAM G+  K+       +  PY S++LQ++PGVE +RP  GK       E  WY+ L +G  +     +N +FYG  L    K           YQADA+SA   L+ TH+   H YR+EW P    G  GYL WY D + ++ +   +LS +  ++IP EP Y+++NTAVS++WGFP  CP  C C CF+C  P CQC LP   C + PAS  +DYVR+YQ  ++ RH LGC+    PT K+I+ H  RY  + +K PL+P+  G   C  + DC     G C   R C C DG+TGP 
Sbjct:  204 IDACAKVNHYGMQAYTGRGAPEIDIIEAMQGEAGKLPSTY---IQRPYQSTSLQIAPGVEIDRPILGK----RPHEGHWYEDLDYGNSTNVTVDLNPFFYGVTLVHKPK--------QYTYQADAISANLQLNDTHYNSMHLYRVEWEPPAEDGSGGYLRWYTDEKFVFGINGDSLS-IMQSEIPSEPMYLLMNTAVSSSWGFPAPCPDNCECECFECGNPACQCALPTDYCNNFPASFEIDYVRVYQAVNESRHILGCSPESRPTEKWIEGHAQRYMEEGDKAPLRPLQTGGMPCEKDRDCGGKLHGICISGR-CACEDGYTGPN 512          
BLAST of EWM24072.1 vs. NCBI_GenBank
Match: gi|219129906|ref|XP_002185118.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403297|gb|EEC43250.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 254.218 bits (648), Expect = 1.459e-74
Identity = 135/327 (41.28%), Postives = 189/327 (57.80%), Query Frame = 0
Query:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDL---GVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFG--EKSKMNMYFYG-TLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMP----GPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDHEKVPLKPVHRGKGKCANNADCN--PGGSCNRRRKCVCHDGWTGP 315
            ++AC    H+ L    GRG+ EIDI+EAM G+P      GDL    +  PY S++LQVSPG+E +RP  GK       E  WY  L +    KS +N +FYG TL+ K              YQ+DA+SA   L ATH+   H YR+EW P    G  GY+ W+ DGE++Y +   +L ++   +IP EP Y+++NTAVS+ WGFP+ CP GC+C CF+C  PEC C +P G C++ PAS  +DYVR+YQ  ++ +H LGC+    PT  FI+ H  RY  + ++ PL+PV  G G C+++ DC     G C+    C C +   GP
Sbjct:  204 INACSLVNHYGLAPKSGRGSPEIDILEAMQGEP------GDLPNTFIQRPYQSTSLQVSPGIEIDRPILGK----RPHEGHWYPDLEYSSQNKSDLNPFFYGVTLVHKPNS---------YTYQSDALSANLQLKATHYSKQHVYRVEWEPPAEDGTGGYIKWFTDGELIYGIHGKSL-DIMKTEIPSEPMYLLMNTAVSSHWGFPQPCPEGCSCKCFECGNPECACAIPSGYCDNFPASFEIDYVRVYQAINESKHILGCSPEARPTATFIEGHAKRYMTEGQRRPLEPVVTGGGSCSSHKDCGGIERGVCSASGLCECSEYSAGP 510          
BLAST of EWM24072.1 vs. NCBI_GenBank
Match: gi|1210513569|dbj|GAX27441.1| (hypothetical protein FisN_23Hh095 [Fistulifera solaris])

HSP 1 Score: 255.758 bits (652), Expect = 1.749e-74
Identity = 145/378 (38.36%), Postives = 205/378 (54.23%), Query Frame = 0
Query:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAG-----KNFTE---HQEEW--TWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPEGYLAWYL--------DGEML-------------YDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPA---SMLVDYVRIYQLEDDERHF-----LGCNHPKFPTRKFIQAHRWRYQRD-----HEKVPLKPVHRGKGKCANNADCNPGGSCNRRRKCVCHDGWTGPQYGGREGGREGGREGGKGG 334
            +SAC+   H+ +  NQGRGATEIDI+E M+G           GV  PY   TLQV+PGV KNRPQ+G     KN      H E    TWYDGL +   + +N +FYGT + +T+ +EP  R+  Q +QADAV  +  L+  H+E  HT+RLEW PG  G L W++        +G M              + +   +L  +TG+QIP+EPSY I+N AVS+TWGFP   P  C   CFDCA P+C C    G C+ L +   +M +D++R+YQ  DD  H      LGC+ P++PT+++I+ H + Y R+      +  PL+ V RG G C ++ADC  GG+  R+      +  +      R G R    +  +GG
Sbjct:  205 ISACNAQNHYGMHPNQGRGATEIDIVEVMTGSSDGPIPGTKPGVSYPYCDMTLQVAPGVTKNRPQSGALPKRKNVLSKNGHTEFLADTWYDGLMYAGNTSINPFFYGTYMAETKPNEPVSRTKKQAFQADAVGVVHELTPAHFEKPHTFRLEWQPGRGGRLDWFVKSYKIENENGTMYVEGDGKGEEWVHAFGIEDKSLEELTGSQIPIEPSYFIMNVAVSSTWGFPYDRPDWCPKDCFDCANPQCACSFYPGYCQMLESGKTAMYIDHIRLYQSSDDSAHVGQPHTLGCDPPEYPTKEWIEGHYYHYMRNPPFSFEDTRPLRKVPRGGGTCTSDADC--GGNVLRKNFTAAFEKSSISDVSTRAGRRLESVKEVRGG 580          
BLAST of EWM24072.1 vs. NCBI_GenBank
Match: gi|1210516822|dbj|GAX24311.1| (hypothetical protein FisN_4Lh425 [Fistulifera solaris])

HSP 1 Score: 251.906 bits (642), Expect = 2.248e-74
Identity = 133/325 (40.92%), Postives = 183/325 (56.31%), Query Frame = 0
Query:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSK----MNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMP----GPEGYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDHEKVPLKPVHRGKGKCANNADC--NPGGSCNRRRKCVCHDGWTGP 315
            + AC +  H+ +Q   GRGA EIDI+EAM G+  K+       +  PY S++LQ++PGVE +RP  GK       E  WY+ L +G  +     +N +FYG  L    K           YQADA+SA   L+ TH+   H YR+EW P    G  GYL WY D + ++ +   +LS +  ++IP EP Y+++NTAVS++WGFP  CP  C C CF+C  P CQC LP   C + PAS  +DYVR+YQ  ++ RH LGC+    PT K+I+ H  RY  + +K PL+P+  G   C  + DC     G C   R C C DG+TGP
Sbjct:  204 IDACAKVNHYGMQAYTGRGAPEIDIIEAMQGEAGKLPSTY---IQRPYQSTSLQIAPGVEIDRPILGK----RPHEGHWYEDLDYGNSTNVTVDLNPFFYGVTLVHKPK--------QYTYQADAISANLQLNDTHYNSMHLYRVEWEPPAEDGSGGYLRWYTDEKFVFGINGDSLS-IMQSEIPSEPMYLLMNTAVSSSWGFPAPCPDNCECECFECGNPACQCALPTDYCSNFPASFDIDYVRVYQAVNESRHILGCSPESRPTEKWIEGHAQRYMEEGDKAPLRPLQTGGMPCEKDRDCGGKLHGICVSGR-CACEDGYTGP 511          
BLAST of EWM24072.1 vs. NCBI_GenBank
Match: gi|1072229426|gb|OEU14161.1| (beta-glucan synthase-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 251.521 bits (641), Expect = 2.194e-73
Identity = 128/326 (39.26%), Postives = 186/326 (57.06%), Query Frame = 0
Query:    1 MSACDRTTHWDLQQNQGRGATEIDIMEAMSGKPHKVTKKGDLGVGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGE----KSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWEDFHTYRLEWMPGPE----GYLAWYLDGEMLYDVPASALSNVTGAQIPVEPSYVILNTAVSTTWGFPETCPAGCACTCFDCAKPECQCGLPEGLCESLPASMLVDYVRIYQLEDDERHFLGCNHPKFPTRKFIQAHRWRYQRDHEKVPLKPVHRGKGKCANNADCN--PGGSCNRRRKCVCHDGWTGPQ 316
            +S+C +  H+ +Q   GRGA EID++E+M G   K+       V  PY S++ QVSPG+E++RP  G       ++  WY G+ +      KS++N +FYG  L    K           YQADA+SA   L+ +H+ + H YR+EW P  E    GY+ W+ D  ++Y +  S L + TG++IP E  Y+++NTAV+ +WGFP  CP GC C CF+C  P+C C LP G CE+ PA+  +DYVR++Q   +E+H LGC+    PT  FI+ H+ RY    + +P+ PV +G   C  N DC     G C+ R  CVC +  TGP 
Sbjct:  211 VSSCSKVNHYGMQPYHGRGAPEIDVIESMQGDAEKLPSTT---VTRPYQSASFQVSPGIERDRPALGMK----PKQGHWYTGMEYNHENLTKSELNPFFYGVKLVHKLKS--------YTYQADALSANRGLNTSHYTNQHIYRVEWDPPAEDGTGGYIRWFTDDVLMYGITGSNL-HTTGSEIPSEAMYLLMNTAVAASWGFPAPCPEGCKCKCFECGNPDCACALPTGYCENFPATFEIDYVRVFQALGEEKHTLGCSPVNRPTSLFIKGHQKRYMEKGDTMPILPVQKGGATCRENKDCGTIKKGHCSARGFCVCKENSTGPN 520          
The following BLAST results are available for this feature:
BLAST of EWM24072.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105364|gb|EWM24072.1|0.000e+0100.00Beta-glucan synthesis-associated, SKN1 [Nannochlor... [more]
gi|553194947|ref|XP_005856060.1|0.000e+085.99beta-glucan synthesis-associated [Nannochloropsis ... [more]
gi|299470105|emb|CBN78134.1|8.392e-9245.37Beta-1,6-glucan active enzyme, family GH16 [Ectoca... [more]
gi|397638563|gb|EJK73120.1|2.919e-8042.46hypothetical protein THAOC_05273 [Thalassiosira oc... [more]
gi|676381457|ref|XP_009034007.1|4.014e-7542.90hypothetical protein AURANDRAFT_70840 [Aureococcus... [more]
gi|1210515108|dbj|GAX26071.1|9.214e-7540.80hypothetical protein FisN_4Hh425 [Fistulifera sola... [more]
gi|219129906|ref|XP_002185118.1|1.459e-7441.28predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210513569|dbj|GAX27441.1|1.749e-7438.36hypothetical protein FisN_23Hh095 [Fistulifera sol... [more]
gi|1210516822|dbj|GAX24311.1|2.248e-7440.92hypothetical protein FisN_4Lh425 [Fistulifera sola... [more]
gi|1072229426|gb|OEU14161.1|2.194e-7339.26beta-glucan synthase-like protein [Fragilariopsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6613rna6613Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications