EWM24080.1, cds6593 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24080.1 vs. NCBI_GenBank
Match: gi|585105375|gb|EWM24080.1| (aldehyde dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 283.493 bits (724), Expect = 6.734e-97 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query: 1 MLSSARGRALSCAFNRSVHRSRNHKSLLGSCSSFTFPVACAPVRNSSCKTLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFKVCAREEIILG 137
MLSSARGRALSCAFNRSVHRSRNHKSLLGSCSSFTFPVACAPVRNSSCKTLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFKVCAREEIILG
Sbjct: 1 MLSSARGRALSCAFNRSVHRSRNHKSLLGSCSSFTFPVACAPVRNSSCKTLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFKVCAREEIILG 137
BLAST of EWM24080.1 vs. NCBI_GenBank
Match: gi|545354342|ref|XP_005643005.1| (aldehyde dehydrogenase [Coccomyxa subellipsoidea C-169] >gi|384244965|gb|EIE18461.1| aldehyde dehydrogenase [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 115.161 bits (287), Expect = 2.322e-27 Identity = 52/82 (63.41%), Postives = 63/82 (76.83%), Query Frame = 0
Query: 46 SSCKTLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFK 127
S + L S+A+VDP +SG P Q YNLV G W LP S TIPDPLNG+PF++LPDTQ DEI P+V++L+AVPKSGLHNP K
Sbjct: 17 QSQRLLSSWASVDPSAISGSNPGQAYNLVNGEWGLPAKSKTIPDPLNGEPFIKLPDTQLDEIDPFVQSLRAVPKSGLHNPLK 98
BLAST of EWM24080.1 vs. NCBI_GenBank
Match: gi|971510682|dbj|GAQ87509.1| (delta-1-pyrroline-5-carboxylate dehydrogenase 1 protein [Klebsormidium nitens]) HSP 1 Score: 104.375 bits (259), Expect = 1.686e-23 Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 0
Query: 50 TLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFK 127
++ SFAT+DP+ LSG +P YNLV G WT S+V IPDPL G+PFL +P+TQ DE P++ +LK+VPKSGLHNPFK
Sbjct: 26 SVPSFATLDPDALSGSQPGTAYNLVGGEWTSSASAVPIPDPLTGEPFLTIPNTQRDECAPFIASLKSVPKSGLHNPFK 103
BLAST of EWM24080.1 vs. NCBI_GenBank
Match: gi|926776824|ref|XP_013896886.1| (1-pyrroline-5-carboxylate dehydrogenase [Monoraphidium neglectum] >gi|761966025|gb|KIY97866.1| 1-pyrroline-5-carboxylate dehydrogenase [Monoraphidium neglectum]) HSP 1 Score: 98.5969 bits (244), Expect = 1.448e-22 Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 0
Query: 46 SSCKTLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQAD-EIGPYVEALKAVPKSGLHNPFK 127
S+ + + S+ATVD + SG P + NLV G W SS+T+PDPLNG+PF +PDTQ D E+ P++++LKAVPK+GLHNPFK
Sbjct: 27 SAKRGVASWATVDVDRWSGAHPAKAQNLVGGKWVDAASSITVPDPLNGEPFTHVPDTQGDAELRPFIDSLKAVPKTGLHNPFK 109
BLAST of EWM24080.1 vs. NCBI_GenBank
Match: gi|302853211|ref|XP_002958122.1| (aldehyde dehydrogenase [Volvox carteri f. nagariensis] >gi|300256590|gb|EFJ40853.1| aldehyde dehydrogenase [Volvox carteri f. nagariensis]) HSP 1 Score: 99.7525 bits (247), Expect = 9.119e-22 Identity = 47/84 (55.95%), Postives = 60/84 (71.43%), Query Frame = 0
Query: 49 KTLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFKVCARE 132
++L +ATVDPE +SG P NLV G W +S +PDPLNG+ FLQ+P TQ DEIGP+V++L+AVPKSGLHNP K R+
Sbjct: 24 RSLTGWATVDPERMSGSAPAACLNLVGGHWLPSGASRQLPDPLNGEHFLQVPHTQPDEIGPFVQSLRAVPKSGLHNPLKDPQRQ 107
BLAST of EWM24080.1 vs. NCBI_GenBank
Match: gi|159477663|ref|XP_001696928.1| (aldehyde dehydrogenase [Chlamydomonas reinhardtii] >gi|158274840|gb|EDP00620.1| aldehyde dehydrogenase [Chlamydomonas reinhardtii]) HSP 1 Score: 98.5969 bits (244), Expect = 2.132e-21 Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = 0
Query: 48 CKTLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFK 127
+ +ATVDP+ LSG P NLV G WT + S +PDPLNG+PF+ +P TQ DEI P+VE+L+AVPKSGLHNP K
Sbjct: 25 ARQFTEWATVDPKKLSGAAPASCQNLVAGRWTGSRESRQLPDPLNGEPFISVPHTQVDEITPFVESLRAVPKSGLHNPLK 104
BLAST of EWM24080.1 vs. NCBI_GenBank
Match: gi|1004144865|gb|KXZ52844.1| (hypothetical protein GPECTOR_8g227 [Gonium pectorale]) HSP 1 Score: 97.4413 bits (241), Expect = 4.293e-21 Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = 0
Query: 37 PVACAPVRNSSCKTLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFK 127
P+A P+ + L +ATVDP+ LSG P NLV G W + S +PDPLNG+PF+ +P TQ DEI P+VE+L+AVPK+GLHNP K
Sbjct: 13 PLAFGPLMQL-VRNLSEWATVDPQKLSGSAPGTCANLVSGRWQPSRESRLLPDPLNGQPFISVPHTQPDEIAPFVESLRAVPKTGLHNPLK 102
BLAST of EWM24080.1 vs. NCBI_GenBank
Match: gi|552816619|ref|XP_005844734.1| (hypothetical protein CHLNCDRAFT_32475 [Chlorella variabilis] >gi|307104378|gb|EFN52632.1| hypothetical protein CHLNCDRAFT_32475 [Chlorella variabilis]) HSP 1 Score: 97.8265 bits (242), Expect = 4.310e-21 Identity = 43/97 (44.33%), Postives = 64/97 (65.98%), Query Frame = 0
Query: 38 VACAPVRNSS-------CKTLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFK 127
+AC+ +R + C+ + S++ +P +SG P Q NLV G W + ++ IPDPLNG+PF+Q+PDTQ E+ P+V ++KA PKSG+HNPFK
Sbjct: 2 LACSAMRREALGHAAGLCRGVASWSKFNPAAMSGSNPAQASNLVYGEWVQAEKTMAIPDPLNGEPFIQVPDTQLYEVEPFVASMKATPKSGMHNPFK 98
BLAST of EWM24080.1 vs. NCBI_GenBank
Match: gi|698784065|ref|XP_009825076.1| (hypothetical protein H257_02935 [Aphanomyces astaci] >gi|574119579|gb|ETV85058.1| hypothetical protein H257_02935 [Aphanomyces astaci]) HSP 1 Score: 96.6709 bits (239), Expect = 1.161e-20 Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0
Query: 37 PVACAPVRN-SSCKTLESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFKVCAR 131
P+ A RN S+ L S+A V+PETLSG P +++NLV G W K S I DPL G+ FLQ+P TQ DE+ P+++ L++ PK GLHNPFK R
Sbjct: 11 PLTSALRRNASTAYALPSWAKVNPETLSGASPAEIHNLVNGEWVSTKKSEGIKDPLTGEVFLQVPLTQKDELKPFIDNLRSTPKHGLHNPFKNVER 106
BLAST of EWM24080.1 vs. NCBI_GenBank
Match: gi|760443533|ref|XP_011398835.1| (putative aldehyde dehydrogenase [Auxenochlorella protothecoides] >gi|675353499|gb|KFM25939.1| putative aldehyde dehydrogenase [Auxenochlorella protothecoides]) HSP 1 Score: 95.5153 bits (236), Expect = 2.999e-20 Identity = 42/81 (51.85%), Postives = 58/81 (71.60%), Query Frame = 0
Query: 51 LESFATVDPETLSGEKPYQVYNLVKGGWTLPKSSVTIPDPLNGKPFLQLPDTQADEIGPYVEALKAVPKSGLHNPFKVCAR 131
L ++ VDP LSG P + NLV G WT S+++ DP+NG+PFL +PDTQ DEI P++++L++VPKSGLHNP K+ R
Sbjct: 28 LSEWSRVDPAQLSGSSPAALSNLVAGEWTQTAQSLSVVDPMNGEPFLAVPDTQLDEIQPFIDSLRSVPKSGLHNPLKLPER 108 The following BLAST results are available for this feature:
BLAST of EWM24080.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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