|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100306g2.2064.mrna |
| Orig protein id | gnl|cribi|Naga_100306g2.2064 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:767425..769104 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6547 ID=rna6547|Name=rna6547|organism=Nannochloropsis gaditana|type=mRNA|length=604bp
TAATAAAACAGACGCCTCCCGACTCACGCTTCTCCGGCGCACACTTTCGT
GTCAGGCATCACGCTGCGGTAGTGGTCAGGATAAAGAGCAGCATGACATC
CATGGACATGGATGCTTCCAGCAGCACCGAGACAGAGAAAATAGACGCCG
CACCAGACGTTCGTCAAGTCCAACCTGCAGCCGCGCCCGATCAAGCCTTC
AATAGCATGCCCTGGGTCGAAAAATACCGGCCCACGTCCCTACAAGACCT
GGTGGCCCATGAAGAGATTATCTCCATCCTGACGCGTCTCATTGAAAAAA
ACCAGCTGCCCCACCTCCTCTTCTATGGCCCGCCTGGAACAGGCAAAACC
TCCACCATCCTCGCCTGCGCCAAGCAGATGTACGGCGCGAGCAAATACGG
GGCCATGACCTTGGAGCTGAACGCCTCGGACGAGAGAGGCATTGACGTGG
TGCGTCAACAGATCAAAGAGTTCGCGGCTACCAAGCGTTTGTTCAGCAAT
GGCGTCAAGCTCGTGATCCTCGACGAAGCCGACCATCTGACCAACGACGC
TCAATTTGCTCTTCGCCGAGTTATCGAGAAATACACCAAGAACACTCGGT
CCGT back to topprotein sequence of rna6547 >rna6547-protein ID=rna6547-protein|Name=rna6547|organism=Nannochloropsis gaditana|type=polypeptide|length=118bp
MASHFLATVSHSESSLTLCALLLLTIICATLFVLRICFGTFSLSRVLAHF
EERRHLERAYALAYQRREDSIYHRDWAKSRGAFSEAKRLDAEIEETESEL
DSLDDTLGNPQGILTKRQ back to topmRNA from alignment at CM002468.1:767425..769104- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6547 ID=rna6547|Name=rna6547|organism=Nannochloropsis gaditana|type=mRNA|length=1680bp|location=Sequence derived from alignment at CM002468.1:767425..769104- (Nannochloropsis gaditana)
TGGACATGTAATGCGGTACCTGCAAAGAATACGCAGCCTTTTGATTAAAA
ATCTCGATTGAATAAGGCGATTGTTTTTGGGGCCTCCTACAGTTGTTAGA
GATGCGTACTTTCGATTTCATCCCCATCGTTGGTGCTACAACGAAATAAT
CACGGAAGGCCTTGAAGGCGCCGCGGGGGTGTGTCGTGTTCCATTTAGCG
CCTCAGTAATGATTGCGTACGCCCCGAACCTTCTGGGCATTCCCACGACA
GCGACCTCGCTGTGGATGCAGATAGGTAAGCGCGCTGATACAAGACCCTG
TGCGCGTAAGGACGAAGCAAAGGCCCTTTGGACACGCTTCCTCTTAGGTT
TCGGTTGCCTTCGTCCCCATGGCGTCCCATTTTTTGGCCACCGTCAGCCA
CAGTGAATCATCCCTCACGGTAAGTGTCATGAAACTCGGCTCGACCATTG
CATATATATTCTATTGAACCGATGCTATAACTATCATCTGGTCGTCACTA
CATGCATTTTGATCTCTCCCTCCCCCTTCCTACCCCCTCACCCCGACCGT
ACAGCTTTGTGCCCTATTGCTCCTCACAATTATCTGCGCGACCTTGTTCG
TACTACGGATTTGCTTCGGCACATTCTCGCTTTCTCGCGTACTCGCTCAC
TTTGAAGAACGTCGGCACTTGGAAAGAGCATATGCCCTGGCATACCAGCG
CCGGGAAGACAGCATTTATCACAGAGACTGGGCGAAGGTAACGAGAAAAA
GACATTAAGCATGCGCCAATTAATACTAACCCCAACCCTAACAACTGCCA
ATTCATTTCTTTAACCCTTTCTGCACCCCGTTCTTGATAGTCGCGAGGCG
CTTTTTCCGAAGCCAAACGCTTGGACGCTGAGATCGAGGAGACGGAATCG
GTACGTGTGCCCGAAACGAAAAATGGCGACCGCGATTGTCATGGTGCCAA
GAAGGCGAAGCCTAGGAGGAGAGGAGGAGGGAAAGGAGTTATGGCATTGG
AAAAGGGAACGTGATGCCCCGTCTGTCCCTGCAGACATGCTCCGGCGGAG
ACGCCTGAGTATCAGATTGATAGTTTCCACGAAGGCGGATCTGGAAAGGC
ACGGACAGATCGTGACAAGGCACCAAGTTCCATCATTCTCGCATACACCC
CTCTCTCTCTCTCTCTCTCTTCCCCTGTCTCTCCGTGCACAGGAATTGGA
TTCCTTGGACGACACACTCGGGAACCCACAGGGAATTTTGACTAAGCGAC
AGTGACGACGATTGTGTCCACCTTGTTGGGTGCCCTTTAATTCGAAAGAA
CTATTTCCGTCCTGTGTCACGAAAAGATGGCGGGCAGGATGATCCACCAT
GGGCAAAAAGCCGTGTCGAAAACCTTCCACGGGAAACATTTCAAACAAAG
CATACCCTCATTTAAAGAGGGATTCTGTGCCAATTGCTGGGATCCTTTGC
TATCAAAAAGTTTATGTCACTCGCTCTTCACAACGGGTACCAAAACTTAA
CTGCGAAGGTAGACAGATGCAGGAAAGCGCGCTTCTATTGCACATATATC
ATACTTTGACCGGTCGTGGGGGAACTGTAATGCAGAGGACATTTATGTAA
AAGATAAAACATGCGCTACTTACTTCTGATTACATGCCAATGAACGCATC
AAAAATGTTTTGCTAAGTTTTGACCTCAGA back to topCoding sequence (CDS) from alignment at CM002468.1:767425..769104- >rna6547 ID=rna6547|Name=rna6547|organism=Nannochloropsis gaditana|type=CDS|length=1428bp|location=Sequence derived from alignment at CM002468.1:767425..769104- (Nannochloropsis gaditana)
GAATTGGATTCCTTGGACGACACACTCGGGAACCCACAGGGAATTTTGAC
TAAGCGACAGTGATCGCGAGGCGCTTTTTCCGAAGCCAAACGCTTGGACG
CTGAGATCGAGGAGACGGAATCGCTTTGTGCCCTATTGCTCCTCACAATT
ATCTGCGCGACCTTGTTCGTACTACGGATTTGCTTCGGCACATTCTCGCT
TTCTCGCGTACTCGCTCACTTTGAAGAACGTCGGCACTTGGAAAGAGCAT
ATGCCCTGGCATACCAGCGCCGGGAAGACAGCATTTATCACAGAGACTGG
GCGAAGATGGCGTCCCATTTTTTGGCCACCGTCAGCCACAGTGAATCATC
CCTCACGGAATTGGATTCCTTGGACGACACACTCGGGAACCCACAGGGAA
TTTTGACTAAGCGACAGTGATCGCGAGGCGCTTTTTCCGAAGCCAAACGC
TTGGACGCTGAGATCGAGGAGACGGAATCGCTTTGTGCCCTATTGCTCCT
CACAATTATCTGCGCGACCTTGTTCGTACTACGGATTTGCTTCGGCACAT
TCTCGCTTTCTCGCGTACTCGCTCACTTTGAAGAACGTCGGCACTTGGAA
AGAGCATATGCCCTGGCATACCAGCGCCGGGAAGACAGCATTTATCACAG
AGACTGGGCGAAGATGGCGTCCCATTTTTTGGCCACCGTCAGCCACAGTG
AATCATCCCTCACGGAATTGGATTCCTTGGACGACACACTCGGGAACCCA
CAGGGAATTTTGACTAAGCGACAGTGATCGCGAGGCGCTTTTTCCGAAGC
CAAACGCTTGGACGCTGAGATCGAGGAGACGGAATCGCTTTGTGCCCTAT
TGCTCCTCACAATTATCTGCGCGACCTTGTTCGTACTACGGATTTGCTTC
GGCACATTCTCGCTTTCTCGCGTACTCGCTCACTTTGAAGAACGTCGGCA
CTTGGAAAGAGCATATGCCCTGGCATACCAGCGCCGGGAAGACAGCATTT
ATCACAGAGACTGGGCGAAGATGGCGTCCCATTTTTTGGCCACCGTCAGC
CACAGTGAATCATCCCTCACGGAATTGGATTCCTTGGACGACACACTCGG
GAACCCACAGGGAATTTTGACTAAGCGACAGTGATCGCGAGGCGCTTTTT
CCGAAGCCAAACGCTTGGACGCTGAGATCGAGGAGACGGAATCGCTTTGT
GCCCTATTGCTCCTCACAATTATCTGCGCGACCTTGTTCGTACTACGGAT
TTGCTTCGGCACATTCTCGCTTTCTCGCGTACTCGCTCACTTTGAAGAAC
GTCGGCACTTGGAAAGAGCATATGCCCTGGCATACCAGCGCCGGGAAGAC
AGCATTTATCACAGAGACTGGGCGAAGATGGCGTCCCATTTTTTGGCCAC
CGTCAGCCACAGTGAATCATCCCTCACG back to top
|