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Properties
| Property Name | Value |
|---|
| Product | short-chain specific acyl- mitochondrial |
| Orig transcript id | gnl|cribi|Naga_100407g1.7968.mrna |
| Orig protein id | gnl|cribi|Naga_100407g1.7968 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:734522..736371 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6533 ID=rna6533|Name=rna6533|organism=Nannochloropsis gaditana|type=mRNA|length=1069bp
CTATATATTTTAAACATGCATTGCCTTGTGCAAGCTAGTAGTTCGAAGAT
TATACCGAGTGCGCCCGATGTTTTTGTCTTATGTTTCGTTGTTTTTCCCT
AGGGCGGAGGCTGAGACTATCTGACAACACTGTAAGGCCCCTCCACATGA
AAATTTTCTCCCTTCTGTTCCCACCATCCTCCACCTCGAGCGCCTTCTTC
TCTTCTGTATGGCCGTTGGTACTGCTGGTAACGTTTGTCATCGTGCCGTT
TCTAGTCCTGTGCGTGCGCGGTCTGTTATCTTCGCGTCCTTCGCATACAA
GACGCCCTTTGGGTTTCTCCTGCCTCTACGTGGGCCGCGTCTGGCACGTT
CGCTTCTTGCCCACTGTCCATAAATTTGCCTATGGTCTGTTTTATACGTA
CCTGGACCTAGACTGCCTCCCTCAGACCTTCCAGGGTATGTGGCCGTTGG
CTTCTTTCTCCACCCTCGCCTCCCCTGCCTCCCTACCGGCATTCGCCCAC
TTCCACGAGGCGGACCACCTCAAGGACGTGCCCGTGGAATACCATCCCTC
CTCATTTCCCTTGCCATCCCCCCCTCCTCCCCCTACCCCCCTGCCTCTCG
CCGAGCGGGTACGGCGCCTGGTGGCCAGGAAGACGGGGCGACGACCCGAG
GGGAGGATCACGTTGCTCACGCACCTGAGGTACATGGGCTACGTCTTCAA
CCCCGTGAGCTTTTATTACGTGTGGGACAAGGAGGGCAAGGCTGTGGAAA
CCGTGGTGGCCGAGGTCAGCAACACCCCCTGGAACGAGATGCACTGCTAC
GTGCTCGACCCTCGCTCCCCGGGGATCAAGGCGACCCGGATGTTGAAGTT
GCGGTCGGTCGCAGGGACGAGGGCGGGGGGAAAGGAGGAGGTGTGGCGCT
ACGTCTTCGACAAGGACTTCCACGTCTCCCCTTTCATGGACATGGCCCAT
GTGTACGACTGGGAGTTCGTGGCGCCCAGGGAGGGGCGGGCGGAGGAAGG
AGCGGAGCGAGGGATGTGGGTCACCACGCACATGCTCAAGAAAGAAGGGA
AGGAACGGTAGGTGAGGGA back to topprotein sequence of rna6533 >rna6533-protein ID=rna6533-protein|Name=rna6533|organism=Nannochloropsis gaditana|type=polypeptide|length=232bp
MLCSGSALRYNTTALLLRRGAARAAQQNLNGRARAYTSVSTLPEEYRSIR
DMVRSFADTELVPNAAQWDREHVFPADQVKAIGEMGLMGVSVPEEYGGAG
MDYMAYAIAIEELSRGCASTGVIASVNNSLYCGPVAQFGTDEQKDTWLTP
YASGSQIGCFGLSEPGNGSDAGAASTTAVLEGEEFVLNGSKAWITNAHEA
SAAIVFATTDKSLKHKGRLMRVSVIFGLSCRL back to topmRNA from alignment at CM002468.1:734522..736371- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6533 ID=rna6533|Name=rna6533|organism=Nannochloropsis gaditana|type=mRNA|length=1850bp|location=Sequence derived from alignment at CM002468.1:734522..736371- (Nannochloropsis gaditana)
GCAAACGCTACTTTGCTGGCGTGGTGCCGTTCAAGCAACGATTCACGTAA
GAACTCGTACCCATTACTCATTGATCCTCTGACTCGTAAAACGCCTACAA
AGGACTTTAAGCATGCTTTGTAGCGGCTCAGCACTGCGATACAACACCAC
GGCTTTATTGTTGCGGCGCGGCGCGGCGCGTGCAGCTCAGCAAAACTTGA
ATGGAAGAGCGCGCGGTACGTCCTAACCCTAACGCGTTGTTCCACTTATG
GCAACCGACTTCCTTCTTTTTCCTGCCTGCTTTCACGTACTCGATCTTTT
TTCGATACACCACATCATTGCTCGATACCAATATTCGGGCCATCATGGAG
CAACGCTTTTCCGAACTCAATTCCCTTCTCGGTTTGTCTTCTCTCCTTAC
GACCTTGTGAAACCAACTCGTCCCATACATTCACCTCCCCGATAGCCTAC
ACAAGTGTCAGCACGTTGCCCGAGGAATATCGTTCCATTCGCGACATGGT
CCGTTCGTTTGCTGACACAGAGCTGGTTCCTAATGCTGCTCAATGGGACA
GGGAGCATGTCTTTCCCGCCGATCAGGTCCGCCTTCCCTCCCTCCCTCCC
TCCCTCCCCCCCTTTCTCCCCCCTTTCCTTCCCCCCTCTGTCTTCCACTC
GCTTTCCACATGACCTACCTCCACCAGTGGAGCTGTATTGAAATCGGGTA
GAAATTCAGCGTGTCCCCCCTCGTCCTTCAACCATGGGCAGGTGAAAGCG
ATCGGGGAGATGGGCTTGATGGGGGTGTCAGTGCCCGAGGAGTATGGCGG
CGCTGGGATGGACTACATGGCGTACGCAATCGCCATCGAAGAGCTCAGCC
GTGGCTGTGCTTCCACAGGGGTAAGGGCGGGATCAACGTACTGGCTTTAA
ATGAAGTATAATTCAATGAAGCATGTTGCCTCCCCGTAACGCCGTGCTCA
CCGTCGTAGGAAAGAGCCAGACATGGCCCGTGTGGTTCTGTTGCCACAAT
TCTCTCCGTGCCTCACAGATGATCCCTTTACTTCCATTCATGTATCACGT
CCTCCCCCCACGCCAGGTGATCGCCAGTGTGAACAATTCCCTGTACTGCG
GGCCCGTCGCGCAGTTTGGGACGGATGAGCAAAAAGACACATGGTAAAGC
CTCTTCCTCTTTTTTTCCCTCGGCTCAACTTCTTGCCTGTTTGTCTGCTT
TGGGTGTCCTCCACGTCCAATCCCTTACCTCGCCCTCCCTCCCTCCCTCC
CTCCCTCCTTCCCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCC
CGCAGGCTGACGCCATACGCCTCCGGCTCTCAAATTGGATGCTTCGGTCT
GTCGGAACCCGGTAACGGCAGCGACGCCGGCGCCGCGAGCACGACCGCGG
TGTTGGAGGGGGAGGAGTTCGTCTTGAACGGGAGTAAGGCCTGGATCACC
AATGCCCACGAGGCGAGTGCAGCCATCGTCTTTGCCACCACGGACAAAAG
CTTGAAGCATAAAGGTAGGCTCATGCGTGTCTCGGTGATTTTTGGCTTAT
CTTGCCGCCTGTGAGCTCGGCTTTTGGAGTTCCCCCCCCCTTTTTTTTCT
CCCGATTTTTTTCCTTGCCATGTAGTTTTTTCTTTTGCGATACCTTTCAT
CATTCGTTCGCGTTGTAATACGAGGAAGAGTGAGAGGGAAGGAGGGGGGA
GGGAAGGAGGGAGGGGAGGAGGGAGGGAAAGCAGGTGGAAGAGCCTGCTC
ATTCGAGTCCTTATCCTGACTGAGGCCGCTATCGACCAGCACGGCTTTCC
CCTTTTGATCGGCATTCGCGCAATTTTTCTTTTCCCTGCTGGTGTCCTGC
back to topCoding sequence (CDS) from alignment at CM002468.1:734522..736371- >rna6533 ID=rna6533|Name=rna6533|organism=Nannochloropsis gaditana|type=CDS|length=3495bp|location=Sequence derived from alignment at CM002468.1:734522..736371- (Nannochloropsis gaditana)
GCTGACGCCATACGCCTCCGGCTCTCAAATTGGATGCTTCGGTCTGTCGG
AACCCGGTAACGGCAGCGACGCCGGCGCCGCGAGCACGACCGCGGTGTTG
GAGGGGGAGGAGTTCGTCTTGAACGGGAGTAAGGCCTGGATCACCAATGC
CCACGAGGCGAGTGCAGCCATCGTCTTTGCCACCACGGACAAAAGCTTGA
AGCATAAAGGTAGGCTCATGCGTGTCTCGGTGATTTTTGGCTTATCTTGC
CGCCTGTGAGTGATCGCCAGTGTGAACAATTCCCTGTACTGCGGGCCCGT
CGCGCAGTTTGGGACGGATGAGCAAAAAGACACATGGTGAAAGCGATCGG
GGAGATGGGCTTGATGGGGGTGTCAGTGCCCGAGGAGTATGGCGGCGCTG
GGATGGACTACATGGCGTACGCAATCGCCATCGAAGAGCTCAGCCGTGGC
TGTGCTTCCACAGGGCCTACACAAGTGTCAGCACGTTGCCCGAGGAATAT
CGTTCCATTCGCGACATGGTCCGTTCGTTTGCTGACACAGAGCTGGTTCC
TAATGCTGCTCAATGGGACAGGGAGCATGTCTTTCCCGCCGATCAGATGC
TTTGTAGCGGCTCAGCACTGCGATACAACACCACGGCTTTATTGTTGCGG
CGCGGCGCGGCGCGTGCAGCTCAGCAAAACTTGAATGGAAGAGCGCGCGG
CTGACGCCATACGCCTCCGGCTCTCAAATTGGATGCTTCGGTCTGTCGGA
ACCCGGTAACGGCAGCGACGCCGGCGCCGCGAGCACGACCGCGGTGTTGG
AGGGGGAGGAGTTCGTCTTGAACGGGAGTAAGGCCTGGATCACCAATGCC
CACGAGGCGAGTGCAGCCATCGTCTTTGCCACCACGGACAAAAGCTTGAA
GCATAAAGGTAGGCTCATGCGTGTCTCGGTGATTTTTGGCTTATCTTGCC
GCCTGTGAGTGATCGCCAGTGTGAACAATTCCCTGTACTGCGGGCCCGTC
GCGCAGTTTGGGACGGATGAGCAAAAAGACACATGGTGAAAGCGATCGGG
GAGATGGGCTTGATGGGGGTGTCAGTGCCCGAGGAGTATGGCGGCGCTGG
GATGGACTACATGGCGTACGCAATCGCCATCGAAGAGCTCAGCCGTGGCT
GTGCTTCCACAGGGCCTACACAAGTGTCAGCACGTTGCCCGAGGAATATC
GTTCCATTCGCGACATGGTCCGTTCGTTTGCTGACACAGAGCTGGTTCCT
AATGCTGCTCAATGGGACAGGGAGCATGTCTTTCCCGCCGATCAGATGCT
TTGTAGCGGCTCAGCACTGCGATACAACACCACGGCTTTATTGTTGCGGC
GCGGCGCGGCGCGTGCAGCTCAGCAAAACTTGAATGGAAGAGCGCGCGGC
TGACGCCATACGCCTCCGGCTCTCAAATTGGATGCTTCGGTCTGTCGGAA
CCCGGTAACGGCAGCGACGCCGGCGCCGCGAGCACGACCGCGGTGTTGGA
GGGGGAGGAGTTCGTCTTGAACGGGAGTAAGGCCTGGATCACCAATGCCC
ACGAGGCGAGTGCAGCCATCGTCTTTGCCACCACGGACAAAAGCTTGAAG
CATAAAGGTAGGCTCATGCGTGTCTCGGTGATTTTTGGCTTATCTTGCCG
CCTGTGAGTGATCGCCAGTGTGAACAATTCCCTGTACTGCGGGCCCGTCG
CGCAGTTTGGGACGGATGAGCAAAAAGACACATGGTGAAAGCGATCGGGG
AGATGGGCTTGATGGGGGTGTCAGTGCCCGAGGAGTATGGCGGCGCTGGG
ATGGACTACATGGCGTACGCAATCGCCATCGAAGAGCTCAGCCGTGGCTG
TGCTTCCACAGGGCCTACACAAGTGTCAGCACGTTGCCCGAGGAATATCG
TTCCATTCGCGACATGGTCCGTTCGTTTGCTGACACAGAGCTGGTTCCTA
ATGCTGCTCAATGGGACAGGGAGCATGTCTTTCCCGCCGATCAGATGCTT
TGTAGCGGCTCAGCACTGCGATACAACACCACGGCTTTATTGTTGCGGCG
CGGCGCGGCGCGTGCAGCTCAGCAAAACTTGAATGGAAGAGCGCGCGGCT
GACGCCATACGCCTCCGGCTCTCAAATTGGATGCTTCGGTCTGTCGGAAC
CCGGTAACGGCAGCGACGCCGGCGCCGCGAGCACGACCGCGGTGTTGGAG
GGGGAGGAGTTCGTCTTGAACGGGAGTAAGGCCTGGATCACCAATGCCCA
CGAGGCGAGTGCAGCCATCGTCTTTGCCACCACGGACAAAAGCTTGAAGC
ATAAAGGTAGGCTCATGCGTGTCTCGGTGATTTTTGGCTTATCTTGCCGC
CTGTGAGTGATCGCCAGTGTGAACAATTCCCTGTACTGCGGGCCCGTCGC
GCAGTTTGGGACGGATGAGCAAAAAGACACATGGTGAAAGCGATCGGGGA
GATGGGCTTGATGGGGGTGTCAGTGCCCGAGGAGTATGGCGGCGCTGGGA
TGGACTACATGGCGTACGCAATCGCCATCGAAGAGCTCAGCCGTGGCTGT
GCTTCCACAGGGCCTACACAAGTGTCAGCACGTTGCCCGAGGAATATCGT
TCCATTCGCGACATGGTCCGTTCGTTTGCTGACACAGAGCTGGTTCCTAA
TGCTGCTCAATGGGACAGGGAGCATGTCTTTCCCGCCGATCAGATGCTTT
GTAGCGGCTCAGCACTGCGATACAACACCACGGCTTTATTGTTGCGGCGC
GGCGCGGCGCGTGCAGCTCAGCAAAACTTGAATGGAAGAGCGCGCGGCTG
ACGCCATACGCCTCCGGCTCTCAAATTGGATGCTTCGGTCTGTCGGAACC
CGGTAACGGCAGCGACGCCGGCGCCGCGAGCACGACCGCGGTGTTGGAGG
GGGAGGAGTTCGTCTTGAACGGGAGTAAGGCCTGGATCACCAATGCCCAC
GAGGCGAGTGCAGCCATCGTCTTTGCCACCACGGACAAAAGCTTGAAGCA
TAAAGGTAGGCTCATGCGTGTCTCGGTGATTTTTGGCTTATCTTGCCGCC
TGTGAGTGATCGCCAGTGTGAACAATTCCCTGTACTGCGGGCCCGTCGCG
CAGTTTGGGACGGATGAGCAAAAAGACACATGGTGAAAGCGATCGGGGAG
ATGGGCTTGATGGGGGTGTCAGTGCCCGAGGAGTATGGCGGCGCTGGGAT
GGACTACATGGCGTACGCAATCGCCATCGAAGAGCTCAGCCGTGGCTGTG
CTTCCACAGGGCCTACACAAGTGTCAGCACGTTGCCCGAGGAATATCGTT
CCATTCGCGACATGGTCCGTTCGTTTGCTGACACAGAGCTGGTTCCTAAT
GCTGCTCAATGGGACAGGGAGCATGTCTTTCCCGCCGATCAGATGCTTTG
TAGCGGCTCAGCACTGCGATACAACACCACGGCTTTATTGTTGCGGCGCG
GCGCGGCGCGTGCAGCTCAGCAAAACTTGAATGGAAGAGCGCGCG back to top
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