EWM24159.1, cds6516 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24159.1 vs. NCBI_GenBank
Match: gi|585105528|gb|EWM24159.1| (Protein of unknown function DUF1365 [Nannochloropsis gaditana]) HSP 1 Score: 665.996 bits (1717), Expect = 0.000e+0 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0 Query: 1 MFRCFSLGRRLRLSDNTVRPLHMKIFSLLFPPSSTSSAFFSSVWPLVLLVTFVIVPFLVLCVRGLLSSRPSHTRRPLGFSCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPREGRAEEGAERGMWVTTHMLKKEGKER 326 MFRCFSLGRRLRLSDNTVRPLHMKIFSLLFPPSSTSSAFFSSVWPLVLLVTFVIVPFLVLCVRGLLSSRPSHTRRPLGFSCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPREGRAEEGAERGMWVTTHMLKKEGKER Sbjct: 1 MFRCFSLGRRLRLSDNTVRPLHMKIFSLLFPPSSTSSAFFSSVWPLVLLVTFVIVPFLVLCVRGLLSSRPSHTRRPLGFSCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPREGRAEEGAERGMWVTTHMLKKEGKER 326
BLAST of EWM24159.1 vs. NCBI_GenBank
Match: gi|299471627|emb|CBN76849.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 194.512 bits (493), Expect = 6.234e-55 Identity = 113/263 (42.97%), Postives = 137/263 (52.09%), Query Frame = 0 Query: 80 SCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQG-MWPLASFSTLASPASLPAFAHFHEADHLKD----VPV-------EYHPSSFPLPSPPPPPTPLPL------------------------------AERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIKATRMLKLR-SVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAP 299 S +Y GRVWH RF PT H F+Y +FY +DLD L F +WP+ S A LPA + F ADHLK PV SS P + A+RVR +V TG RP GR+ LLTHL Y+GY FNPVSFYY DK + +ETVVAEVSNTPW EMHCYVL+P++ G++ K + T G +E+ RY F+KDFHVSPFM M H YDW+F AP Sbjct: 51 SAVYAGRVWHARFKPTAHHFSYPIFYCLVDLDELDIAFPWYIWPVGS-------ARLPALSRFRSADHLKGRGAATPVFAAGGGGGGDESSSAAAGDPVDAAGDGVGRNEGGRGASGPSRARATAATSSPPLSSSLADRVRDIVEEATGARPTGRVQLLTHLAYLGYCFNPVSFYYCLDKTEREIETVVAEVSNTPWGEMHCYVLNPKTKGVQVIAKDKSNDNDNNTSKRGTKEITRYRFEKDFHVSPFMSMKHTYDWKFTAP 306
BLAST of EWM24159.1 vs. NCBI_GenBank
Match: gi|1175909275|gb|OQW30151.1| (chromosome partitioning protein ParA [Nitrospira sp. SG-bin1]) HSP 1 Score: 170.244 bits (430), Expect = 1.209e-47 Identity = 102/248 (41.13%), Postives = 127/248 (51.21%), Query Frame = 0 Query: 80 SCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPREGRA--EEGAERGMWVTTHMLKKEGKE 325 S +Y G V H RF P H F Y LF Y+DLD LP FQ W + T A F+ ADH+ D PT +PL +R+LV +TG +P G I LLTHLRY GYVFNPVSFY+ +D+ + VET+VAE++NTPW E HCYVL S RA G+++ RY FDK FH+SPF+DM YDW F P A E +G +K E +E Sbjct: 3 SAIYTGHVRHRRFSPVSHAFTYRLFMMYVDLDELPTLFQNRWFWSVNRT--------NLASFNRADHVGD------------------PT-IPLGGSIRQLVEERTGSQPAGPIRLLTHLRYFGYVFNPVSFYFCYDRSDRCVETIVAEITNTPWGERHCYVL----------------SSEQNRASGRKK--RYQFDKIFHISPFIDMDVAYDWRFTEPTSQLAIHMENLRKGQPFFDATMKLERRE 205
BLAST of EWM24159.1 vs. NCBI_GenBank
Match: gi|737636524|ref|WP_035606560.1| (DUF1365 domain-containing protein [Hylemonella gracilis] >gi|597957747|gb|EYC50935.1| chromosome partitioning protein ParA [Hylemonella gracilis str. Niagara R]) HSP 1 Score: 164.851 bits (416), Expect = 1.691e-45 Identity = 99/225 (44.00%), Postives = 118/225 (52.44%), Query Frame = 0 Query: 79 FSCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVL--DPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPRE 301 FS LYVGRV H RF P H F YGL+ YLDL L + F G W ++ A A F D+L D LPL E VR+ VA+ TGRRP G I +LTHLRY GYVFNPV+FYYV D +ET+VAE++NTPW E HCYVL D ++P + ++ R+ F KDFHVSPFM M YDW F P E Sbjct: 2 FSALYVGRVRHRRFQPRPHDFRYGLYMVYLDLAELDRVFAGRWFWSTRRM--------ALARFRREDYLGD-------------------PALPLDEAVRQRVAQATGRRPTGPIRMLTHLRYFGYVFNPVTFYYVHDAADTRLETIVAEITNTPWKERHCYVLPQDEQAP--------------------RPDLHRHRFTKDFHVSPFMPMEQDYDWRFTPPGE 179
BLAST of EWM24159.1 vs. NCBI_GenBank
Match: gi|931407428|gb|KPJ95237.1| (chromosome partitioning protein ParA [Gammaproteobacteria bacterium SG8_11]) HSP 1 Score: 163.31 bits (412), Expect = 1.060e-44 Identity = 99/227 (43.61%), Postives = 113/227 (49.78%), Query Frame = 0 Query: 73 TRRPLGFSCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAP 299 TR L S +Y G+V H RF P H F Y LF LDL L F+ W +S A F DH+ D P+ PLA+ VRRLV +TGR P G I LLTHLRY GY FNPVSFYY +D VE +VAEV+NTPW E HCYVL + G++ RY FDKDFHVSPFM MA YDW F AP Sbjct: 7 TRELLMNSYIYAGQVRHRRFQPKTHSFQYRLFMMLLDLAELDTVFKSRWLWSSRGF--------NLAWFRRKDHMGD------PNK-------------PLADEVRRLVREQTGRTPRGPIRLLTHLRYFGYCFNPVSFYYCYDASDTRVEAIVAEVNNTPWGEQHCYVL------------------TESMNQGRDRHKRYTFDKDFHVSPFMQMAVHYDWRFSAP 188
BLAST of EWM24159.1 vs. NCBI_GenBank
Match: gi|1101253884|gb|OIP99305.1| (chromosome partitioning protein ParA [Zetaproteobacteria bacterium CG2_30_46_52]) HSP 1 Score: 162.155 bits (409), Expect = 1.601e-44 Identity = 96/250 (38.40%), Postives = 133/250 (53.20%), Query Frame = 0 Query: 79 FSCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQG--MWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPREGRAEEGAERGMWVTTHMLKKEGKER 326 FSCLY G V H R+ P VH+F LFY ++DLD L F+G +W + S++ A F +D+L D + PL V V +TG+RP+G + LLTHLRY G+VFNPVSFYY +D+ G+ VE +VAE++NTPW+E H YVL V+ + AG +E +++ FDK+FH+SPFM MA Y W F AP E +T HM+ G+++ Sbjct: 2 FSCLYEGVVRHRRYAPKVHRFENNLFYAFIDLDELDTVFKGRWLWSVGSWN----------LASFKRSDYLGDAHI-------------------PLKSAVLDCVETQTGKRPQGPVRLLTHLRYFGFVFNPVSFYYCYDEAGEFVEAIVAEITNTPWDERHAYVL----------------PVSQSNAG--DEKFQFAFDKEFHISPFMPMAMHYQWYFTAPAEH-----------LTVHMVNFIGEDK 193
BLAST of EWM24159.1 vs. NCBI_GenBank
Match: gi|1174250078|ref|WP_081463440.1| (DUF1365 domain-containing protein [Hylemonella gracilis]) HSP 1 Score: 161.77 bits (408), Expect = 3.919e-44 Identity = 101/231 (43.72%), Postives = 119/231 (51.52%), Query Frame = 0 Query: 73 TRRPLGFSCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVL--DPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPRE 301 +RR FS LYVGRV H R LP H F YGLF YLDL L + F G W ++ A A F D+L D LPL E VR VA+ TG+RP G I +LTHLRY GYVFNPV+FYYV D VET+VAE++NTPW E H YVL D +P K ++ R+ F K+FHVSPFM M YDW F +P E Sbjct: 13 SRRAPMFSALYVGRVRHRRLLPRPHDFRYGLFMVYLDLAELDRVFAGRWFWSTRRM--------ALARFRREDYLGD-------------------PALPLDEAVRLRVAQATGQRPTGPIRMLTHLRYFGYVFNPVTFYYVHDAADTRVETIVAEITNTPWKERHSYVLPQDAHAP--------------------KPDLHRHRFTKNFHVSPFMPMEQEYDWRFTSPGE 196
BLAST of EWM24159.1 vs. NCBI_GenBank
Match: gi|332041247|gb|EGI77611.1| (hypothetical protein HGR_05454 [Hylemonella gracilis ATCC 19624]) HSP 1 Score: 160.614 bits (405), Expect = 6.824e-44 Identity = 99/225 (44.00%), Postives = 116/225 (51.56%), Query Frame = 0 Query: 79 FSCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVL--DPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPRE 301 FS LYVGRV H R LP H F YGLF YLDL L + F G W ++ A A F D+L D LPL E VR VA+ TG+RP G I +LTHLRY GYVFNPV+FYYV D VET+VAE++NTPW E H YVL D +P K ++ R+ F K+FHVSPFM M YDW F +P E Sbjct: 2 FSALYVGRVRHRRLLPRPHDFRYGLFMVYLDLAELDRVFAGRWFWSTRRM--------ALARFRREDYLGD-------------------PALPLDEAVRLRVAQATGQRPTGPIRMLTHLRYFGYVFNPVTFYYVHDAADTRVETIVAEITNTPWKERHSYVLPQDAHAP--------------------KPDLHRHRFTKNFHVSPFMPMEQEYDWRFTSPGE 179
BLAST of EWM24159.1 vs. NCBI_GenBank
Match: gi|1175937636|gb|OQW57549.1| (chromosome partitioning protein ParA [Nitrospira sp. ST-bin4]) HSP 1 Score: 160.229 bits (404), Expect = 9.276e-44 Identity = 93/220 (42.27%), Postives = 115/220 (52.27%), Query Frame = 0 Query: 80 SCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAP 299 S +Y G V H RF P H F Y LF Y+DLD LP F+ W + T A F DH+ D P+ PL + +R+LV +TG RP G I LLTH RY GYVFNPVSFY+ +D+ + V+T+VAE++NTPW E HCYVL G K RA G+ + Y FDK FH+SPF+DM VYDW F P Sbjct: 3 SAIYTGHVRHRRFSPVPHAFTYRLFMMYVDLDELPTVFENRWFWSVDRT--------NLAAFRRRDHVGD-PIN------------------PLNDSIRQLVEERTGSRPAGPIRLLTHFRYFGYVFNPVSFYFCYDRFDRGVDTIVAEITNTPWGERHCYVL-----GTK-----------DNRARGRRK--HYQFDKAFHISPFIDMDTVYDWRFTEP 177
BLAST of EWM24159.1 vs. NCBI_GenBank
Match: gi|931475153|gb|KPK56566.1| (chromosome partitioning protein ParA [Thiotrichales bacterium SG8_50]) HSP 1 Score: 159.458 bits (402), Expect = 1.801e-43 Identity = 95/222 (42.79%), Postives = 117/222 (52.70%), Query Frame = 0 Query: 80 SCLYVGRVWHVRFLPTVHKFAYGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDVPVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLRYMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIKATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPRE 301 SC+Y GRV H R P +H+F+Y +F YLDLD LP F+ W + A+ PA A F DHL PL+E +R+LV R+TG RP+G I LLT+L Y GY FNPVSFYY +D +GK ++T+VAEV+NTPW E YVL P S I GK V R+ +K HVSPFM M YDW F P E Sbjct: 3 SCIYEGRVKHTRTDPVLHRFSYRMFMMYLDLDELPTLFRKRWLWS--------ATRPALARFRREDHLG-------------------AAGEPLSESIRKLVERETGSRPQGPIRLLTNLSYFGYCFNPVSFYYCFDADGKTLKTIVAEVNNTPWGERDTYVL-PESLDI-----------------GKRGVKRFRPEKKMHVSPFMPMEVDYDWCFTQPEE 179 The following BLAST results are available for this feature:
BLAST of EWM24159.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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