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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF1365 |
| Orig transcript id | gnl|cribi|Naga_100741g1.7089.mrna |
| Orig protein id | gnl|cribi|Naga_100741g1.7089 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:732631..734138 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6532 ID=rna6532|Name=rna6532|organism=Nannochloropsis gaditana|type=mRNA|length=1740bp
CTCACAAATTACACACACAGGATATCGTGCATGAGAAAATCGCGACGGTG
GTCAGCAAATTTTCTTCGCGGACGGATGCACATTTTTTCTTGCTAGAGTC
GAGCAACCTGTCATTTTTGCGACTGGTGCTTTCGCTTCATCCGCAGTATT
TTCCCGACGGAGGGGGCTGTGTGCAATGGGTGACAACGACAGCACTGGTG
CACCTTCGGAGCCAATTCTGCCTCCCCTGGTTCCTGAAGGGACGTCACCA
AGCTTTACACCTGCTTCCCCCGCCCTGTGCTTTCACATTCATGCCCGGTG
GCGGCGGGCACGCGCTGCCACAGTCCACCTGCCGCACGGCCCCCTAGCGA
CCCCAGTATTCATGCCAGTGGGTACAAAGGGGACCATCAAGGGCATCCCC
ACCGAGCAACTACTGCACGAAGACCTTTCTCCGCAAATCATTCTGGGTAA
CACGTACCATCTGGCACTGCAGCCTGGGACGGAGCTCCTGGAGGAAATGG
GGGGGTTGCATGAATTCATGCAATGGCCTCGCAATTTGCTCACAGACTCC
GGTGGCTTCCAGATGGTCTCTTTACTCGCCTTGGCAGAGATCACGGAGGA
AGGTGTGCGGTTTCAGAGCCCCGTGGACGGGACGCAGATGCTCCTGACCC
CCGAGATGTCCATCGCGCACCAAAACCGTATCGGCTCGGACATTATGATG
CAATTGGACGACGTGGTTTCCTCTGTGACCGTGGACCATGCGCGTTTCGT
GGAGGCAACAGCACGCTCCATCCGGTGGCTGGATCGCTGCAGGAAGGCCC
ACTCGCGTCCCCGGGAACAAAATTTGTTTGGTATTATCCAGGGAGGACTT
GATACCTCCCCAGGCGGCCTCCGGGACGAATGTTTGACAGCCATGGTAGC
TCGCGACTGCCCTGGCTACGCGATCGGCGGCCTAGCAGGCGGGGAAAGCA
AAGAGGCCTTCTGGAAGGTGGTGGCGCAGTGCACGGCGGCCCTTCCGGAG
GGGAAACCTCGGTATTTGATGGGCGTGGGCTATCCGTTGGATCTGGTCGT
GTGCACCGCCCTAGGCGTTGACATGTACGATTGCGTGTACCCCACGCGAA
CGGCCCGCTTTGGGGTGGCGCTTAGAGACGCGGGCGTCCTCAAACTGAAA
AACAAGGCGTGTGCCGGGGAGGAAAAGCAAGCCATCGACCCTTTGTGCGG
GTGCATGGTTTGTCGACATTATTCGCAAGCGGCCCTGCATCGCCTCCTTA
AGTCGGGTGCCTTAGGGTGTCAATTGGTCACGTACCACAATCTTGCCTAC
ATGCTGGGCTTGATGCGCCGGATGCGGAGTGCGATCATGCAAGGAGGTCA
AGCCTTCCCTCACTTTGTAGTGGGTTTTCTGACGACGCATTATGCCTGGA
AAAACAGGGAAGAGGGGGTAGAGTGCAGGAGGAAAGGAGAATGCGGGATG
GTACCGGAATGGGTAAGGGAGGCTCTAGCTGTGGCGGGCATAGACGTGCC
AGATCAGTCGCAGGAGGGGAACGGGCATGACCGGGGAGGCAAGGACCCTG
TCTAATCTCTTAAAATCAATGCAAAAGATACGAAATGGTTGTAAAGATGG
CTTGAGGCTTAATTAAGAAGTGGCTTGGAGCTTATTGCTTGCATTGGAAA
GAATGCATGCGTGTATGGGATTGAGCTGAACGGTGCAAAAGGCAGTCCGC
AGCAGGAATGCCTGTTTCATAATAATTATCTGTACCCTGC back to topprotein sequence of rna6532 >rna6532-protein ID=rna6532-protein|Name=rna6532|organism=Nannochloropsis gaditana|type=polypeptide|length=326bp
MFRCFSLGRRLRLSDNTVRPLHMKIFSLLFPPSSTSSAFFSSVWPLVLLV
TFVIVPFLVLCVRGLLSSRPSHTRRPLGFSCLYVGRVWHVRFLPTVHKFA
YGLFYTYLDLDCLPQTFQGMWPLASFSTLASPASLPAFAHFHEADHLKDV
PVEYHPSSFPLPSPPPPPTPLPLAERVRRLVARKTGRRPEGRITLLTHLR
YMGYVFNPVSFYYVWDKEGKAVETVVAEVSNTPWNEMHCYVLDPRSPGIK
ATRMLKLRSVAGTRAGGKEEVWRYVFDKDFHVSPFMDMAHVYDWEFVAPR
EGRAEEGAERGMWVTTHMLKKEGKER back to topmRNA from alignment at CM002468.1:732631..734138+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6532 ID=rna6532|Name=rna6532|organism=Nannochloropsis gaditana|type=mRNA|length=1508bp|location=Sequence derived from alignment at CM002468.1:732631..734138+ (Nannochloropsis gaditana)
CTATATATTTTAAACATGCATTGCCTTGTGCAAGCTAGTAGTTCGAAGAT
TATACCGAGTGCGCCCGATGTTTTTGTCTTATGTTTCGTTGTTTTTCCCT
AGGGCGGAGGCTGAGACTATCTGACAACACTGTAAGGCCCCTCCACATGA
aaattttctcccttctgttcccaccatcctccacctcgagcgccttcttc
tcttctgtATGGCCGTTGGTACTGCTGGTAACGTTTGTCATCGTGCCGTT
TCTAGTCCTGTGCGTGCGCGGTCTGTTATCTTCGCGTCCTTCGCATACAA
GACGCCCTTTGGGTTTCTCCTGCCTCTACGTGGGCCGCGTCTGGCACGTT
CGCTTCTTGCCCACTGTCCATAAATTTGCCTATGGTCTGTTTTATACGTA
CCTGGACCTAGGTAAGCActtgaagagggcggggagaggtgTGTATCCAA
GTGATGAGGCGGGACAGGGGGCAAATGATGGATTCGGACGAGCAGCTCAA
GTCACGACACAAAACAAGCCCGCCAGGCGCGTTCAACGGCCAACTGGGCC
TCTCCAAAACCCACGGCGTGTGTGCTCTTATGTTATACCATTCTTGTATG
GGCAAAGAAGAAGGTATCGAGGTGTGCGCGCATCTTTTGTAGGTCCTTaa
ccccctccttccccccgtcagACTGCCTCCCTCAGACCTTCCAGGGTATG
TGGCCGTtggcttctttctccaccctcgcctcccctgcctccctacCGGC
ATTCGCCCACTTCCACGAGGCGGACCACCTCAAGGACGTGCCCGTGGAAT
accatccctcctcatttcccttgccatccccccctcctccccctaccccc
ctgcctctcgccGAGCGGGTACGGCGCCTGGTGGCCAGGAAGACGGGGCG
ACGACCCGAGGGGAGGATCACGTTGCTCACGCACCTGAGGTACATGGGCT
ACGTCTTCAACCCCGTGAGCTTTTATTACGTGTGGGacaaggaggtgagg
gaagggggtttcggagggagggggaaagggagggtgggaaggaaggaggg
agggaaggggagcaaaGGGGAGAACGCGGAAGGAGTATAAGCACACGTAT
GTGCCGAGTCTGTGCCATTCATCGAgactcttcttccttccttccctccc
tccctccctctcgccctcggcAGGGCAAGGCTGTGGAAACCGTGGTGGCC
GAGGTCAGCAACACCCCCTGGAACGAGATGCACTGCTACGTGCTCGACCC
TCGCTCCCCGGGGATcaaggcgacccggatgttgAAGTTGCGGTCGGTCg
cagggacgagggcggggggaaaggaggaggtgtggcGCTACGTCTTCGAC
AAGGACTTCCACGTCTCCCCTTTCATGGACATGGCCCATGTGTACGACTG
GGAGTTCGTGGCGcccagggaggggcgggcggaggaaggagcggagcGAG
GGATGTGGGTCACCACGCACATGCtcaagaaagaagggaaggaacggtag
gtgaggga back to topCoding sequence (CDS) from alignment at CM002468.1:732631..734138+ >rna6532 ID=rna6532|Name=rna6532|organism=Nannochloropsis gaditana|type=CDS|length=2943bp|location=Sequence derived from alignment at CM002468.1:732631..734138+ (Nannochloropsis gaditana)
ATGTTTCGTTGTTTTTCCCTAGGGCGGAGGCTGAGACTATCTGACAACAC
TGTAAGGCCCCTCCACATGAaaattttctcccttctgttcccaccatcct
ccacctcgagcgccttcttctcttctgtATGGCCGTTGGTACTGCTGGTA
ACGTTTGTCATCGTGCCGTTTCTAGTCCTGTGCGTGCGCGGTCTGTTATC
TTCGCGTCCTTCGCATACAAGACGCCCTTTGGGTTTCTCCTGCCTCTACG
TGGGCCGCGTCTGGCACGTTCGCTTCTTGCCCACTGTCCATAAATTTGCC
TATGGTCTGTTTTATACGTACCTGGACCTAGACTGCCTCCCTCAGACCTT
CCAGGGTATGTGGCCGTtggcttctttctccaccctcgcctcccctgcct
ccctacCGGCATTCGCCCACTTCCACGAGGCGGACCACCTCAAGGACGTG
CCCGTGGAATaccatccctcctcatttcccttgccatccccccctcctcc
ccctacccccctgcctctcgccGAGCGGGTACGGCGCCTGGTGGCCAGGA
AGACGGGGCGACGACCCGAGGGGAGGATCACGTTGCTCACGCACCTGAGG
TACATGGGCTACGTCTTCAACCCCGTGAGCTTTTATTACGTGTGGGacaa
ggagGGCAAGGCTGTGGAAACCGTGGTGGCCGAGGTCAGCAACACCCCCT
GGAACGAGATGCACTGCTACGTGCTCGACCCTCGCTCCCCGGGGATcaag
gcgacccggatgttgAAGTTGCGGTCGGTCgcagggacgagggcgggggg
aaaggaggaggtgtggcGCTACGTCTTCGACAAGGACTTCCACGTCTCCC
CTTTCATGGACATGGCCCATGTGTACGACTGGGAGTTCGTGGCGcccagg
gaggggcgggcggaggaaggagcggagcGAGGGATGTGGGTCACCACGCA
CATGCtcaagaaagaagggaaggaacggtagATGTTTCGTTGTTTTTCCC
TAGGGCGGAGGCTGAGACTATCTGACAACACTGTAAGGCCCCTCCACATG
Aaaattttctcccttctgttcccaccatcctccacctcgagcgccttctt
ctcttctgtATGGCCGTTGGTACTGCTGGTAACGTTTGTCATCGTGCCGT
TTCTAGTCCTGTGCGTGCGCGGTCTGTTATCTTCGCGTCCTTCGCATACA
AGACGCCCTTTGGGTTTCTCCTGCCTCTACGTGGGCCGCGTCTGGCACGT
TCGCTTCTTGCCCACTGTCCATAAATTTGCCTATGGTCTGTTTTATACGT
ACCTGGACCTAGACTGCCTCCCTCAGACCTTCCAGGGTATGTGGCCGTtg
gcttctttctccaccctcgcctcccctgcctccctacCGGCATTCGCCCA
CTTCCACGAGGCGGACCACCTCAAGGACGTGCCCGTGGAATaccatccct
cctcatttcccttgccatccccccctcctccccctacccccctgcctctc
gccGAGCGGGTACGGCGCCTGGTGGCCAGGAAGACGGGGCGACGACCCGA
GGGGAGGATCACGTTGCTCACGCACCTGAGGTACATGGGCTACGTCTTCA
ACCCCGTGAGCTTTTATTACGTGTGGGacaaggagGGCAAGGCTGTGGAA
ACCGTGGTGGCCGAGGTCAGCAACACCCCCTGGAACGAGATGCACTGCTA
CGTGCTCGACCCTCGCTCCCCGGGGATcaaggcgacccggatgttgAAGT
TGCGGTCGGTCgcagggacgagggcggggggaaaggaggaggtgtggcGC
TACGTCTTCGACAAGGACTTCCACGTCTCCCCTTTCATGGACATGGCCCA
TGTGTACGACTGGGAGTTCGTGGCGcccagggaggggcgggcggaggaag
gagcggagcGAGGGATGTGGGTCACCACGCACATGCtcaagaaagaaggg
aaggaacggtagATGTTTCGTTGTTTTTCCCTAGGGCGGAGGCTGAGACT
ATCTGACAACACTGTAAGGCCCCTCCACATGAaaattttctcccttctgt
tcccaccatcctccacctcgagcgccttcttctcttctgtATGGCCGTTG
GTACTGCTGGTAACGTTTGTCATCGTGCCGTTTCTAGTCCTGTGCGTGCG
CGGTCTGTTATCTTCGCGTCCTTCGCATACAAGACGCCCTTTGGGTTTCT
CCTGCCTCTACGTGGGCCGCGTCTGGCACGTTCGCTTCTTGCCCACTGTC
CATAAATTTGCCTATGGTCTGTTTTATACGTACCTGGACCTAGACTGCCT
CCCTCAGACCTTCCAGGGTATGTGGCCGTtggcttctttctccaccctcg
cctcccctgcctccctacCGGCATTCGCCCACTTCCACGAGGCGGACCAC
CTCAAGGACGTGCCCGTGGAATaccatccctcctcatttcccttgccatc
cccccctcctccccctacccccctgcctctcgccGAGCGGGTACGGCGCC
TGGTGGCCAGGAAGACGGGGCGACGACCCGAGGGGAGGATCACGTTGCTC
ACGCACCTGAGGTACATGGGCTACGTCTTCAACCCCGTGAGCTTTTATTA
CGTGTGGGacaaggagGGCAAGGCTGTGGAAACCGTGGTGGCCGAGGTCA
GCAACACCCCCTGGAACGAGATGCACTGCTACGTGCTCGACCCTCGCTCC
CCGGGGATcaaggcgacccggatgttgAAGTTGCGGTCGGTCgcagggac
gagggcggggggaaaggaggaggtgtggcGCTACGTCTTCGACAAGGACT
TCCACGTCTCCCCTTTCATGGACATGGCCCATGTGTACGACTGGGAGTTC
GTGGCGcccagggaggggcgggcggaggaaggagcggagcGAGGGATGTG
GGTCACCACGCACATGCtcaagaaagaagggaaggaacggtag back to top
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