EWM24252.1, cds6423 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24252.1 vs. NCBI_GenBank
Match: gi|585105643|gb|EWM24252.1| (serine acetyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 755.362 bits (1949), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MTLSMKTWHFLLIFFALGHVMAFFHMPPPTVLWKGETRASLSRAANEEIGTEGGKEAEQRAPVKDTVSSGSSGASFSMELQSKSPSRIQDLVRLLHASEDPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKVTSVLRKHKENVLSIQGMGQSHFVEIFQDPQRGG 369 MTLSMKTWHFLLIFFALGHVMAFFHMPPPTVLWKGETRASLSRAANEEIGTEGGKEAEQRAPVKDTVSSGSSGASFSMELQSKSPSRIQDLVRLLHASEDPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKVTSVLRKHKENVLSIQGMGQSHFVEIFQDPQRGG Sbjct: 1 MTLSMKTWHFLLIFFALGHVMAFFHMPPPTVLWKGETRASLSRAANEEIGTEGGKEAEQRAPVKDTVSSGSSGASFSMELQSKSPSRIQDLVRLLHASEDPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKVTSVLRKHKENVLSIQGMGQSHFVEIFQDPQRGG 369
BLAST of EWM24252.1 vs. NCBI_GenBank
Match: gi|922359204|ref|XP_013453581.1| (serine acetyltransferase [Medicago truncatula] >gi|657384245|gb|KEH27614.1| serine acetyltransferase [Medicago truncatula]) HSP 1 Score: 220.32 bits (560), Expect = 9.550e-66 Identity = 121/305 (39.67%), Postives = 179/305 (58.69%), Query Frame = 0 Query: 57 AEQRAPVKDTVSSGSSGASFSMELQSKSPSRIQDLVRLLHASEDPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKVTSVLRKHKENVLSIQGMGQSHFVEI 361 +E+R P+ + ++M L P I D+ DP+WE VK EA+ A ++ + + VL ++ +A +LQ L AT++ +I +VF + I + +R D+ RD + S +A L+ KG+H++ YR+AH+++ QGR+ LA LQS SE+FG DIHPA +G + L GT VVIGETA +G+ V +MQ VTLGG GKE GDRHPK+G G L+ AGST+LGNI IG+GV+I+AGS+VL+ P + +G+PAKV LR+H ++ G +E+ Sbjct: 17 SEKRFPLSSSYRLEKVFPVYAMGLPDPDPESILDV-------SDPIWEAVKQEAKHEAEKEPVLSSFLYASVLAHECLEQVLAFVVANRLQSPTLLATQLMDIICNVFMHDKAIQRSIRLDVQAFKDRDPACLSYCSAILYMKGFHSLQVYRVAHALWHQGRKVLALALQSRVSEVFGIDIHPAAKIGEGILLDHGTGVVIGETAVIGNRVSLMQAVTLGGTGKESGDRHPKVGEGALIGAGSTILGNIKIGEGVMIAAGSLVLKDAPPRSIVAGIPAKVIGGLREHDPSLTMRHGEQNPDKIEV 314
BLAST of EWM24252.1 vs. NCBI_GenBank
Match: gi|357484065|ref|XP_003612319.1| (serine acetyltransferase [Medicago truncatula] >gi|355513654|gb|AES95277.1| serine acetyltransferase [Medicago truncatula]) HSP 1 Score: 220.705 bits (561), Expect = 9.908e-66 Identity = 124/316 (39.24%), Postives = 183/316 (57.91%), Query Frame = 0 Query: 57 AEQRAPVKDTVSSGSSGASFSMELQSKSPSRIQDLVRLLHASEDPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKVTSVLRKHKENVLSIQGMGQ---SHFVEIFQDPQRGG 369 +E+R P+ + ++M L P I D+ DP+WE VK EA+ A ++ + + VL ++ +A +LQ L AT++ +I +VF + I + +R D+ RD + S +A L+ KG+H++ YR+AH+++ QGR+ LA LQS SE+FG DIHPA +G + L GT VVIGETA +G+ V +MQ VTLGG GKE GDRHPK+G G L+ AGST+LGNI IG+GV+I+AGS+VL+ P + +G+PAKV LR+H ++ + SH F+D + G Sbjct: 17 SEKRFPLSSSYRLEKVFPVYAMGLPDPDPESILDV-------SDPIWEAVKQEAKHEAEKEPVLSSFLYASVLAHECLEQVLAFVVANRLQSPTLLATQLMDIICNVFMHDKAIQRSIRLDVQAFKDRDPACLSYCSAILYMKGFHSLQVYRVAHALWHQGRKVLALALQSRVSEVFGIDIHPAAKIGEGILLDHGTGVVIGETAVIGNRVSLMQAVTLGGTGKESGDRHPKVGEGALIGAGSTILGNIKIGEGVMIAAGSLVLKDAPPRSIVAGIPAKVIGGLREHDPSLTMRHDATKQFFSHVATNFRDEKSSG 325
BLAST of EWM24252.1 vs. NCBI_GenBank
Match: gi|502161681|ref|XP_004512247.1| (PREDICTED: serine acetyltransferase 2 [Cicer arietinum]) HSP 1 Score: 219.55 bits (558), Expect = 4.055e-65 Identity = 116/273 (42.49%), Postives = 168/273 (61.54%), Query Frame = 0 Query: 100 DPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKVTSVLRKHKENVLSIQGMGQSHFVEI---FQDPQRGG 369 DP+W+ VK EA+ A ++ + + VL ++ A +A +LQ L AT++ +I +V + I + +R D+ RD + S +A L+ KG+H + TYR+AH+++ QGR+ LA QS SE+FG DIHPA +G + L GT VVIGETA +G+ V +MQGVTLGG GKE GDRHPK+G GVL+ A ST+LGNI IGDGV+I+AGS+VL+ P + +G+PAKV LR+H ++ + F + F+D + G Sbjct: 58 DPIWDAVKQEAKLEAEKEPILSSFLYASVLSHECLEQALAFVVANRLQSPTLLATELMDIISNVIMHDKAIQRSIRLDVQAFKDRDPACLSYCSAILYMKGFHCLQTYRVAHALWHQGRKVLALAFQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAVIGNRVSLMQGVTLGGTGKETGDRHPKVGEGVLIGASSTILGNIKIGDGVMIAAGSLVLKDAPPRSIVAGIPAKVIGGLREHDPSLTMKHDATKPFFSNVAANFRDEKNNG 330
BLAST of EWM24252.1 vs. NCBI_GenBank
Match: gi|298715528|emb|CBJ28098.1| (Serine O-acetyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 222.631 bits (566), Expect = 4.233e-65 Identity = 111/260 (42.69%), Postives = 169/260 (65.00%), Query Frame = 0 Query: 79 ELQSKSPSRIQDLVRLLHASEDPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKVTS 338 E Q + DLV+LL SE+PLWELV+FE ++ Q + ++ VL R ++ A +A K+ + L T+++ L+ ++ +EP + + EDLL M+D+S+P +L A LF KG+ A+ TYR+ + ++ + R +LARYLQS+ SE+ ADIHPA +G+ + ++ G +VIGETA +GD V I+QGVTLGG G + G+RHPK+G G + GS++LGNIP+G+G I A SVV++P+ YT GVP+K + Sbjct: 147 ERQDPRVHSLVDLVKLLEVSENPLWELVRFEGREASKQSH-VSSMLHGSVLARTSLEDAVSCDVADKMATTFLSPTEVRSLMSDMYADEPLLDFVVAEDLLAHAMQDTSLPDVLTAMLFHKGFTALTTYRLMNWLWRRDRHNLARYLQSICSEVCAADIHPASTIGKGILMAGGCDIVIGETAMVGDGVCILQGVTLGGTGNQTGNRHPKVGKGCHIGVGSSILGNIPLGEGSRIEAASVVVKPIKPYTINRGVPSKTVA 405
BLAST of EWM24252.1 vs. NCBI_GenBank
Match: gi|504860245|ref|WP_015047347.1| (serine O-acetyltransferase [Simiduia agarivorans] >gi|409026899|gb|AFU99183.1| serine acetyltransferase [Simiduia agarivorans SA1 = DSM 21679]) HSP 1 Score: 214.157 bits (544), Expect = 6.796e-64 Identity = 111/235 (47.23%), Postives = 152/235 (64.68%), Query Frame = 0 Query: 100 DPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPA 334 D +W + +A Q+ A + +L+ +SA LA+KL A ++ +ID E+PGI REDL RDS+ SL FL+ KG+HA+ +YRIAH ++S+GR+SLA +LQ+ S++FG DIHPA +GR + L T +VIGETA + D+V IMQGVTLGG GKE GDRHPK+ GVL++AG+TVLGNI IG+G ++AGSVVL+ V +T +GVPA Sbjct: 14 DSVWIEICARTREAAEQEPMLASFLHATILNHDTFESALSFHLASKLDSPMAQAMMVREVIDQAIAEDPGIALAAREDLCAINTRDSACCSLATPFLYFKGFHALQSYRIAHWLWSKGRKSLALFLQNRISQVFGVDIHPAARIGRGVMLDHATGIVIGETAVVEDNVSIMQGVTLGGTGKESGDRHPKVRRGVLISAGATVLGNITIGEGAKVAAGSVVLKAVEPHTTVAGVPA 248
BLAST of EWM24252.1 vs. NCBI_GenBank
Match: gi|497354820|ref|WP_009669033.1| (serine O-acetyltransferase [gamma proteobacterium IMCC1989] >gi|330420658|gb|EGG94949.1| Serine acetyltransferase [gamma proteobacterium IMCC1989]) HSP 1 Score: 213.386 bits (542), Expect = 8.197e-64 Identity = 105/239 (43.93%), Postives = 150/239 (62.76%), Query Frame = 0 Query: 98 SEDPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKV 336 + DP+WE+++ ++ A Q+ A + +L+ ++ A LA+KL A ++ +I+ Q I Q +R D++ RDS+ L FLF KG+HA+ YR+AH ++ Q R+ LA +LQ+ S FG DIHPA +G+ + L T +VIGETA + D+V IMQ VTLGG GKE GDRHPK+ GVL+ AGS +LGNI +G+G +S+GSVVL PVP +T +GVPAKV Sbjct: 3 NNDPVWEMMRCTSQEHAQQEPLLASFLHATILNHDSLEDALSYHLASKLDSPTASALLIREIIEDALQSSDTISQAMRADIVATYERDSACECLSTPFLFYKGFHALQAYRVAHWLWQQNRKQLACFLQNHISMAFGVDIHPAATIGKGIMLDHATGIVIGETAVVEDNVSIMQSVTLGGTGKECGDRHPKIRQGVLIGAGSKILGNIEVGEGAHVSSGSVVLHPVPAHTVVAGVPAKV 241
BLAST of EWM24252.1 vs. NCBI_GenBank
Match: gi|519054926|ref|WP_020210801.1| (serine O-acetyltransferase [Gilvimarinus chinensis]) HSP 1 Score: 213.386 bits (542), Expect = 9.102e-64 Identity = 109/239 (45.61%), Postives = 151/239 (63.18%), Query Frame = 0 Query: 98 SEDPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKV 336 S DP+WE ++ A AA++ A + +L+ ++ A LA KL+ LPA ++ +ID ++ I +R D+ RDS+ SL FLF KG+HA+ YRIAH ++++ R ++A +LQ+ S +F DIHPA +GR + L GT +VIGETA + DDV IMQ VTLGG GKE GDRHPK+ SGVL++AG+ +LGNI IG + AGSVVL+ VP T +GVPAKV Sbjct: 9 SADPVWEQIRHSATEQAAKEPMLASFLYATILNHTTLEDALSFHLANKLESPALPAISVREVIDEALADDASIGAAMRADIQAINERDSACCSLTTPFLFFKGFHALQAYRIAHWLWTRERRAMALFLQNRISVVFAVDIHPAARIGRGIMLDHGTGIVIGETAVVEDDVSIMQAVTLGGTGKESGDRHPKVRSGVLISAGAKILGNIEIGHCAKVGAGSVVLKSVPARTTVAGVPAKV 247
BLAST of EWM24252.1 vs. NCBI_GenBank
Match: gi|739597679|ref|WP_037455227.1| (serine O-acetyltransferase [Skermanella stibiiresistens]) HSP 1 Score: 213.001 bits (541), Expect = 1.777e-63 Identity = 112/238 (47.06%), Postives = 151/238 (63.45%), Query Frame = 0 Query: 100 DPLWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKVT 337 D +W L++ +A +A++E G I VL SA LA KL N+PA +++ L E+PGIV DL+ RD + S L FL+ KG+HA+ +RI H +++ GR SLA +LQS SE+F DIHPA +GR +++ GT +V+GETA++G++V I+Q VTLGG GKE GDRHPK+ GVL++AG+ VLGNI IG G I AGSVVL+ VPE GVPAKV Sbjct: 12 DKVWNLLRADAVRISAEEEILRGFIHGAVLFHDDYASALGALLAHKLGDRNMPAERLERLTHEALIEDPGIVDAGAADLIAILERDPAADSYLTPFLYFKGFHALQWHRIGHWLWTHGRHSLAHFLQSRVSEVFAIDIHPAVPIGRGVFIDHGTGLVVGETAEIGNNVSILQEVTLGGTGKEHGDRHPKVRDGVLISAGAKVLGNIVIGRGAKIGAGSVVLKEVPECATVVGVPAKVV 249
BLAST of EWM24252.1 vs. NCBI_GenBank
Match: gi|587640149|gb|EWY39169.1| (serine O-acetyltransferase [Skermanella stibiiresistens SB22]) HSP 1 Score: 211.46 bits (537), Expect = 4.074e-63 Identity = 111/236 (47.03%), Postives = 150/236 (63.56%), Query Frame = 0 Query: 102 LWELVKFEAETSAAQDEKAAGLIQQRVLDRGGIQSAARDFLATKLQGSNLPATKMKLLIDSVFQEEPGIVQDLREDLLVATMRDSSIPSLLAAFLFSKGYHAVATYRIAHSIYSQGRESLARYLQSLNSELFGADIHPACCVGRALYLSSGTCVVIGETAKLGDDVIIMQGVTLGGNGKERGDRHPKLGSGVLVAAGSTVLGNIPIGDGVIISAGSVVLRPVPEYTRCSGVPAKVT 337 +W L++ +A +A++E G I VL SA LA KL N+PA +++ L E+PGIV DL+ RD + S L FL+ KG+HA+ +RI H +++ GR SLA +LQS SE+F DIHPA +GR +++ GT +V+GETA++G++V I+Q VTLGG GKE GDRHPK+ GVL++AG+ VLGNI IG G I AGSVVL+ VPE GVPAKV Sbjct: 1 MWNLLRADAVRISAEEEILRGFIHGAVLFHDDYASALGALLAHKLGDRNMPAERLERLTHEALIEDPGIVDAGAADLIAILERDPAADSYLTPFLYFKGFHALQWHRIGHWLWTHGRHSLAHFLQSRVSEVFAIDIHPAVPIGRGVFIDHGTGLVVGETAEIGNNVSILQEVTLGGTGKEHGDRHPKVRDGVLISAGAKVLGNIVIGRGAKIGAGSVVLKEVPECATVVGVPAKVV 236 The following BLAST results are available for this feature:
BLAST of EWM24252.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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