EWM24282.1, cds6395 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24282.1 vs. NCBI_GenBank
Match: gi|585105673|gb|EWM24282.1| (hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 707.983 bits (1826), Expect = 0.000e+0 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0 Query: 1 MSSGRVRAPFSCFTTCMLTLFCRTAGAAAHVSFLTSSQRPLSSSHCNSRILCGSSRMLNMMKAAAGDSSQLNRFVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEILQEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRRLMRK 341 MSSGRVRAPFSCFTTCMLTLFCRTAGAAAHVSFLTSSQRPLSSSHCNSRILCGSSRMLNMMKAAAGDSSQLNRFVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEILQEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRRLMRK Sbjct: 1 MSSGRVRAPFSCFTTCMLTLFCRTAGAAAHVSFLTSSQRPLSSSHCNSRILCGSSRMLNMMKAAAGDSSQLNRFVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEILQEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRRLMRK 341
BLAST of EWM24282.1 vs. NCBI_GenBank
Match: gi|1182762266|emb|SMF54886.1| (TatD DNase family protein [Pseudobacteriovorax antillogorgiicola]) HSP 1 Score: 234.187 bits (596), Expect = 2.202e-72 Identity = 121/267 (45.32%), Postives = 171/267 (64.04%), Query Frame = 0 Query: 74 FVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEILQEMGVVKADFHCFCGKTKLGKRIAEA-GYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRRLM 339 ++D+H H+ HE+F+ + + V QRAKD L VVNGLEP SNR +LK+ +H + PALGIYP+DA IN A PF +FDVD E+EFI G + AVGECGLD Y+ + F EQERV KL+ +A HDLP+I+HTRK E R+ EIL+ + +FHC+ GK KL R+AE G++ SIP+ ++++F K++ E+P +LTETD+P+ PE+ RNEP V + +AE++ L++A + NF+RLM Sbjct: 2 YIDIHTHLTHEKFSADLEQVIQRAKDAQLSAIVVNGLEPASNREILKMAAKH-DVIYPALGIYPIDA----INKLAQDLPFSVA-QFDVDKEIEFIAAQAKAGAIKAVGECGLDGYWVGEET-FTEQERVFIKLLDIAMTHDLPIIIHTRKREKRSIEILEHYKPKRVNFHCYGGKVKLALRVAEEHGWHFSIPANARKNQAFTKMLLELPEASILTETDAPFLAPEQGQRNEPCHVVGTIAYLAELRQWPLDKARELVLNNFKRLM 261
BLAST of EWM24282.1 vs. NCBI_GenBank
Match: gi|1101215908|gb|OIP64910.1| (hypothetical protein AUK30_05710 [Nitrospirae bacterium CG2_30_70_394]) HSP 1 Score: 205.297 bits (521), Expect = 6.785e-61 Identity = 110/267 (41.20%), Postives = 155/267 (58.05%), Query Frame = 0 Query: 74 FVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEILQEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRRLMR 340 D H H+ FAG+ DAV RA+ G+ + V NG + +NRA L L HP +LPALGIYP+DA N + P+ DV AE+ FID + VA+GECGLD ++ ++ Q V LI +A +HD PLI+H+R+AE E+L G + D HCF G+ KL +R AG+Y SIP+ + E F+K+ +++PL LLTETD+PY P + RNEPA V V A+AE++ + ++E ++ NF RL R Sbjct: 2 LFDCHTHLTDPAFAGDLDAVLARARAAGVRWMVTNGTDGPTNRAALALAATHPE-ILPALGIYPVDAVANEVLASGPTLPWTQA-PCDVAAELAFIDAHAS--AAVAIGECGLDGHWVATHLD--RQREVFAALIDLALRHDRPLIVHSRRAEAEAVEMLLARGATRVDLHCFSGRFKLAQRACAAGFYCSIPATLPHHELFQKMARDLPLTSLLTETDAPYLAPVRGERNEPAHVAATVAAIAELRHLPVDEVEATLEANFCRLFR 262
BLAST of EWM24282.1 vs. NCBI_GenBank
Match: gi|735012722|gb|KHO46788.1| (TatD DNase family protein [archaeon GW2011_AR3]) HSP 1 Score: 195.667 bits (496), Expect = 2.435e-57 Identity = 107/270 (39.63%), Postives = 166/270 (61.48%), Query Frame = 0 Query: 68 SSQLNRFVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEILQEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRR 337 S + VDVH H+ E+F + D V +RA++ GL++ V NGL+ +SNR VL+L ++ + ALGIYP++A R+ ++DAE+ FI + +GK++ +GE G+D ++ P A Q+ + K I +A++ D+PLI+H+R AE T +IL+ G K HCF G +L +RI + + LSIP+ V S F+K+VK+V + QLLTETD+PY GPE+ RNEPA V V+ +AE+KG++ EE +I N+++ Sbjct: 5 SLSMGLLVDVHAHLDSEKFKTDLDEVMERARNAGLKHIVSNGLDAKSNRRVLELAGKY-GEIKAALGIYPIEAL-------KLRDD-------EIDAEIGFIRQ--NKGKIIGIGEVGVDYHWDKTPEGHARQKGIFSKFISLAREIDVPLIVHSRDAEADTVDILEHEGCKKVVMHCFGGSMELVERIEKNRWVLSIPANVVVSGHFQKIVKKVSITQLLTETDAPYLGPERGKRNEPANVSGAVKKIAELKGMTEEETAKNIYMNYQK 257
BLAST of EWM24282.1 vs. NCBI_GenBank
Match: gi|1101104468|gb|OIO63147.1| (hypothetical protein AUJ83_01680 [Candidatus Woesearchaeota archaeon CG1_02_33_12]) HSP 1 Score: 195.282 bits (495), Expect = 3.266e-57 Identity = 104/266 (39.10%), Postives = 157/266 (59.02%), Query Frame = 0 Query: 74 FVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEILQEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRRLM 339 VDVH H+ +F + D V +RA+ G++ + NGL P+SNR L+L ++ + PA G+YP D A + E +++E+ FI++ + K+ A+GE GLD YC E Q+ + K+I ++KK + PLI+H+RKAE IL+ K HCF GK +L KR A GYY S+P+ V RS F+KLV+ V +++LLTETDSPY P KN RNEP+ + ++ +AE+K IS+ E N+I N++++ Sbjct: 3 LVDVHAHLDLNEFDSDLDEVIKRAETAGVKAIISNGLNPESNRKTLELSKKY-KIVKPAFGLYP-DDALKLTEKE-------------IESELNFIEK--NKDKIAAIGEVGLDYKYCKKKQEQELQKEIFLKIINLSKKINKPLIIHSRKAEQEIISILENSDAKKVVLHCFSGKLRLIKRAAGLGYYFSVPTNVVRSNQFQKLVEIVDINKLLTETDSPYLSPYKNKRNEPSFIIEAIKKIAEIKNISINETANNIFMNYQKIF 251
BLAST of EWM24282.1 vs. NCBI_GenBank
Match: gi|1176152459|gb|OQX69993.1| (hypothetical protein B6A08_02175 [Sorangiineae bacterium NIC37A_2]) HSP 1 Score: 194.897 bits (494), Expect = 6.789e-57 Identity = 109/269 (40.52%), Postives = 157/269 (58.36%), Query Frame = 0 Query: 73 RFVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEILQEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRRLMRK 341 R DVH H+ +F GE AV +RAK+ G+ + NGL + N VL L R S + PALG+YP+DA + P +A V +I ++ +A+GE GLD ++ + +A QE+V R L+ VA + D P+I+HTRKAE R FEIL E+GV + ++HC+ + KL ++IA+ G++LSIPS V RSE+F +++ +P QLL ETD PY P R+EP V +E+ G+ LEEA + ENF RL R+ Sbjct: 2 RLFDVHAHLTSPKFQGEVPAVLERAKEAGVTKIISNGLNRKDNEKVLALA-RESSLVRPALGLYPVDAVLPEMTEAGVDYPREDTQIEPAEAVVAWIAENASDA--IAIGEIGLDHHWVPEQF-WARQEQVFRSLVQVALELDKPIIIHTRKAEARCFEILVELGVKRVNWHCYSSRLKLARQIADYGHFLSIPSNVRRSETFTGMLRTLPRSQLLLETDCPYLAPVPGERSEPMHVRGTATFASELWGVPLEEAARTFEENFERLFRE 266
BLAST of EWM24282.1 vs. NCBI_GenBank
Match: gi|735015831|gb|KHO49852.1| (TatD DNase family protein [archaeon GW2011_AR9]) HSP 1 Score: 183.726 bits (465), Expect = 1.246e-52 Identity = 107/272 (39.34%), Postives = 159/272 (58.46%), Query Frame = 0 Query: 74 FVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEIL------QEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRRLM 339 +DVHCH+ H F + D+V RAK G+ +V+G+ P++NR VL+ R+P L +LGIYP+DA + P+ PF K +++ E FI++ + KV A+GE G+D ++ + EQ RK+I AKK PL++H+RKAE EIL ++ VV HCF GK K+ A G+Y SIP+ V +S SF+ L+K V ++QLLTETDSP+ P R+EPA V ++ +A++K I+ EEA + EN+ R+ Sbjct: 3 LIDVHCHLNHVLFKPDLDSVIARAKQAGVVRILVSGVNPEANREVLEYVKRYPDILRASLGIYPIDALG--LTPDEVGLPF-HKGKINLEEEFAFIEK--NQDKVTAIGEVGMDFHWAEKEKTYLEQADNFRKIIRFAKKIKKPLVIHSRKAEAECIEILSQEIQHHQVAVVN---HCFSGKKNTIKQAASLGHYFSIPANVIKSSSFQTLIKLVDINQLLTETDSPWLTPYGQ-RSEPAYVLESIKMIAQIKEITPEEAATKVWENYARVF 265
BLAST of EWM24282.1 vs. NCBI_GenBank
Match: gi|1084210788|gb|OGM02083.1| (hypothetical protein A3K72_00015 [Candidatus Woesearchaeota archaeon RBG_13_36_6]) HSP 1 Score: 183.341 bits (464), Expect = 1.475e-52 Identity = 100/269 (37.17%), Postives = 160/269 (59.48%), Query Frame = 0 Query: 74 FVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFP-PPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEILQEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRRLMRK 341 VDVH H+ H F + D V QRAK G++ + NG+ P++NR+ L++ ++ + ALGIYP+DA + E+ P P+ FDVD E++FI+ + K+VAV E GLD Y EQ++V KL+ +A+K + P+++H+R AE EILQ + K HCF GK L K+ + G++ SIP+ + RS+ F+K+ + L Q+ TETD+PY P + RNE + + ++ +A++K ++ EE N+I N++R+ K Sbjct: 3 LVDVHAHLDHIDFKEDLDLVIQRAKQAGVKAIISNGINPETNRSTLEIAKKY-DIVKAALGIYPIDA----LQKESEIGECPLKPNVFDVDKEIKFIE--ANKNKIVAVAEIGLDFKYSKKK---DEQKQVFEKLLALAEKLNKPVMVHSRGAEQDCVEILQTTRLKKIILHCFSGKLTLVKKGLDNGWFFSIPTNIVRSQQFQKIAEVSSLSQIFTETDAPYLSPFRGTRNESSFIIETIKKIAKIKNLTQEEVANNIYMNYQRVFGK 261
BLAST of EWM24282.1 vs. NCBI_GenBank
Match: gi|1083785334|gb|OGI64482.1| (hypothetical protein A2642_01810 [Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_39_10]) HSP 1 Score: 178.333 bits (451), Expect = 1.520e-50 Identity = 97/268 (36.19%), Postives = 154/268 (57.46%), Query Frame = 0 Query: 74 FVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEIL------QEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENF 335 +D HCH+ H + + + V +RAK ++ +V+G+ P SNR VLKL +HP L +LGIYP+DA P D+DAE++FI++ + ++ A+GE G+D ++ + +Q RK+I AK+ P+++H+RKAE +IL +E+ +V+ HCF GK L K+ E G+Y SIP+ + +S+ F+ L+K VPL Q+ TETD P+ P K+ +NEPA V ++ +AE+K +S I EN+ Sbjct: 3 LIDDHCHLTHVLYKDDLNDVLKRAKAANIKRILVSGVNPPSNREVLKLVQQHPGILRASLGIYPIDALGLAEGDSGLPLQKTP---IDIDAELQFINQH--KDQITAIGEIGMDFHWADKETTYQQQSDNFRKIIRFAKQIKKPIVIHSRKAEAECIQILAEEIPNKEIPIVQ---HCFSGKKSLIKQAQELGHYFSIPTNLIKSDQFQTLIKMVPLQQITTETDGPWLSPYKDQKNEPAFVLDAIKKIAELKQLSETAVAQQIWENY 262
BLAST of EWM24282.1 vs. NCBI_GenBank
Match: gi|735011928|gb|KHO46008.1| (TatD DNase family protein [archaeon GW2011_AR4]) HSP 1 Score: 176.407 bits (446), Expect = 6.315e-50 Identity = 97/266 (36.47%), Postives = 156/266 (58.65%), Query Frame = 0 Query: 74 FVDVHCHIIHEQFAGEEDAVAQRAKDKGLEYCVVNGLEPQSNRAVLKLCDRHPSSLLPALGIYPLDAACNVINPEAWRNPFPPPDKFDVDAEVEFIDRMCAEGKVVAVGECGLDAYYCTDPVEFAEQERVLRKLIVVAKKHDLPLILHTRKAELRTFEILQEMGVVKADFHCFCGKTKLGKRIAEAGYYLSIPSVVARSESFKKLVKEVPLDQLLTETDSPYQGPEKNVRNEPATVPIGVQAMAEVKGISLEEAMNSIRENFRRLM 339 +D+H H+ EQF + D V QRA+D G+ + NGL+ Q+NR+VL L ++ + PALG+YP D A ++ + + E++FI++ + K++A+GE GLD + D ++ EQ+ +I +A + + PLI+H+R+AE ++L + K FHCF G + K I G+Y SIP ++ R++SF+ LV+ D+LLTETDSPY K RNEPA +P+ ++ +AE++G+S E N I +N+ L Sbjct: 3 LLDIHAHLDDEQFKPDLDEVLQRARDAGVTTIITNGLDIQTNRSVLLLAKKY-HLIKPALGLYP-DEAIRLVPSQLYE-------------EIDFIEK--NKNKIIAIGEVGLDGKHHKDRLD--EQKEAFSLMIDLAMRINKPLIVHSRQAEQECIDLLTKKAPKKVVFHCFGGSLEQAKDIKRKGWYFSIPPIILRNQSFQDLVQLAGPDRLLTETDSPYLSSVKGKRNEPAEIPLVIKKIAELEGLSAGEVENIIYKNYSTLF 249 The following BLAST results are available for this feature:
BLAST of EWM24282.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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