EWM24298.1, cds6373 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24298.1 vs. NCBI_GenBank
Match: gi|585105690|gb|EWM24298.1| (udp-n-acetylglucosamine transferase subunit alg14 [Nannochloropsis gaditana]) HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0 Query: 1 MPSVVHLQGRSIMPTSDNIKTYEKEGGMAILDLQESFARTLAIFAAIYVLCIVSALLAFRLYVVLPNRVTNARVTPPSVTEQHVRTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKAALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQLC 271 MPSVVHLQGRSIMPTSDNIKTYEKEGGMAILDLQESFARTLAIFAAIYVLCIVSALLAFRLYVVLPNRVTNARVTPPSVTEQHVRTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKAALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQLC Sbjct: 1 MPSVVHLQGRSIMPTSDNIKTYEKEGGMAILDLQESFARTLAIFAAIYVLCIVSALLAFRLYVVLPNRVTNARVTPPSVTEQHVRTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKAALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQLC 271
BLAST of EWM24298.1 vs. NCBI_GenBank
Match: gi|1173956128|gb|OQS02999.1| (40S ribosomal protein S19-3 [Thraustotheca clavata]) HSP 1 Score: 199.904 bits (507), Expect = 1.048e-58 Identity = 119/269 (44.24%), Postives = 153/269 (56.88%), Query Frame = 0 Query: 10 RSIMPTSDNIKTYEK------EGGMAILDLQESFARTLAIFAAIYVLCIVSALLAFRLYVVLPNRVTNARVTPPSVTEQHVRTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKAALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVK-HVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQLC 271 R I+ + +K EK +GG I ++ +A A+ V+ +V +R + +LP RV N R T S H T LVVLGSGGHT EML +++ L +Y PL FV A +D S K E + F +PRSR VGQSWLTT TT +A S+ +V + QPD++LCNGPGTCIP+CAA ++LRFLGVK H KIIF ESF RVT LSL+GK+LY D F+V WP L+ YP +YLG LC Sbjct: 107 RHILHQLEEMKVVEKCAEGVNKGGRRISSHGQTDLDRIAGQVALAVIAVV-----YRAWTILPARV-NGRATKASNASVH---TTYRTLVVLGSGGHTTEMLKLIKQLNVDKYVPLAFVVAATDDTSREKAKV------ERKEEQLKF------FEIPRSREVGQSWLTTIFTTAKAFLHSMGIVLKYQPDLLLCNGPGTCIPLCAAVFLLRFLGVKAHSKIIFCESFARVTHLSLSGKILYHFVDEFVVHWPQLQTAYPNTKYLGVLC 354
BLAST of EWM24298.1 vs. NCBI_GenBank
Match: gi|658907467|ref|XP_008436463.1| (PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform X1 [Poecilia reticulata]) HSP 1 Score: 191.43 bits (485), Expect = 7.082e-57 Identity = 109/257 (42.41%), Postives = 153/257 (59.53%), Query Frame = 0 Query: 19 IKTYEKEGGMAILDLQESFARTLAI---FAAIYVLCIVSALLAFRLYVVLPNRVTNARVTPPSVTEQHVRTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKA--ALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQL 270 ++ E+ G ++ A +A+ F ++ L + + L R+Y VL N+ PP T HV A+LVV GSGGHT E+L ++ L Y P +V A++D SE + + P S S V F+ + +PRSR V QSW ++ ++TL AL S+ LV RLQPDV+LCNGPGTC+P+C G +LR LG+K V I++VES CRV TLSLTG++LY +D F VQW LRDKYP+A +LG++ Sbjct: 1 MQQNERHSGEEVMSFWSKTASVVAVMWLFGVVFSLFMTALLFLLRVYFVL-----NSGSNPPK-TRSHV-----AVLVVAGSGGHTTEILRLMDSLSA-AYTPRHYVIADTDKMSEEKIVSFERCKPESH---SDVQFT----INRIPRSREVAQSWSSSVVSTLNALRYSIPLVFRLQPDVVLCNGPGTCVPLCMTGLLLRILGIKKVGIVYVESICRVQTLSLTGRILYLVSDYFFVQWSSLRDKYPKAIFLGRI 238
BLAST of EWM24298.1 vs. NCBI_GenBank
Match: gi|290986705|ref|XP_002676064.1| (predicted protein [Naegleria gruberi] >gi|284089664|gb|EFC43320.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 189.119 bits (479), Expect = 1.748e-56 Identity = 93/213 (43.66%), Postives = 136/213 (63.85%), Query Frame = 0 Query: 63 VVLPNRVTNARVTPPSVTEQHVRTTPAAL---LVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKAALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALV-ARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQLC 271 ++LP R+ ++ ++P+++ LVVLGSGGHT EM+ ++Q L+P RY+ L FV A++D+ SE V+ L ++ S + +PRSR V QS+ T+ TTL+AL + + + PD+I+ NGPGTCIP+C + Y+ RFLG+KHVKIIF+ES CRV +LS +GK++Y ADRFLV WP L+ KY EY G++C Sbjct: 1 MILPKRIKEGSFKLDKSNKK--LSSPSSIIKTLVVLGSGGHTGEMMDVIQTLDPKRYK-LEFVLADTDSTSEKFVRNLLKDKTDFEPLSFHY--------IPRSREVHQSYFTSIFTTLKALFYTTVITNVNINPDLIIVNGPGTCIPVCLSAYLTRFLGIKHVKIIFIESVCRVESLSASGKIMYLLADRFLVHWPQLQHKYKNVEYHGRMC 202
BLAST of EWM24298.1 vs. NCBI_GenBank
Match: gi|675370209|gb|KFM63111.1| (UDP-N-acetylglucosamine transferase subunit ALG14-like protein, partial [Stegodyphus mimosarum]) HSP 1 Score: 187.578 bits (475), Expect = 1.161e-55 Identity = 102/222 (45.95%), Postives = 138/222 (62.16%), Query Frame = 0 Query: 47 IYVLCIVSALLAF---RLYVVLPNRVTNARVTPPSVTEQHVRTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKAALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAE 265 +Y + IV L+ R+++V VTP VR + A L++VLGSGGHT EML ++ L+ ++RP V+V A +D SE KA + + SV + +PRSR V QSWL+T TTL + S LV + +P+ ILCNGPGTC+P+C + + L LG KH+KII+VES CRV T+SLTGK+LY AD FLVQWPGLR+KYP+A+ Sbjct: 7 VYFVNIVRTLVCLFFVRVFIVYQRIHKKKNVTP-------VRRSAAKLMIVLGSGGHTFEMLRLISNLDE-KFRPRVYVLANTDILSEQ--KAQAFEAIKTSNKSVELYTIE---KIPRSREVNQSWLSTVFTTLISCFHSFLLVIKHKPEAILCNGPGTCVPLCISAFSLHVLGWKHIKIIYVESICRVHTMSLTGKILYNMADHFLVQWPGLREKYPRAK 215
BLAST of EWM24298.1 vs. NCBI_GenBank
Match: gi|1009603725|ref|XP_015929887.1| (UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform X3 [Parasteatoda tepidariorum]) HSP 1 Score: 186.422 bits (472), Expect = 2.941e-55 Identity = 94/225 (41.78%), Postives = 139/225 (61.78%), Query Frame = 0 Query: 46 AIYVLCIVSALLAFRLYVVLPNRVTNARVTPPSVTEQHVRTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKAALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQL 270 I +L ++ L R+++V R+ N + T P V+T +VVLGSGGHT EM +++ + ++ P +++ A SD SE K+ LP + V + +PRSR V QS++T+ LTTL+A S L+ R PD ++CNGPGTC+P+C + ++L LG+KH+K I+VES CRV+TLSL+GK+LY D F+VQWP +R KYP A+Y G+L Sbjct: 6 CINILTTLTCLFVVRMWIVYL-RIHNNKRTIPRAKTPSVKT-----MVVLGSGGHTFEMFQLIKNISN-KFSPRIYIIANSDTLSECKAKSFEESLDNLPENYV-------IERIPRSREVAQSYITSVLTTLKASIFSFLLICRHMPDCLICNGPGTCVPLCLSAFLLHSLGLKHIKTIYVESICRVSTLSLSGKILYHLTDYFIVQWPDIRKKYPHAKYFGRL 216
BLAST of EWM24298.1 vs. NCBI_GenBank
Match: gi|1009603719|ref|XP_015929885.1| (UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform X1 [Parasteatoda tepidariorum]) HSP 1 Score: 186.422 bits (472), Expect = 3.157e-55 Identity = 94/225 (41.78%), Postives = 139/225 (61.78%), Query Frame = 0 Query: 46 AIYVLCIVSALLAFRLYVVLPNRVTNARVTPPSVTEQHVRTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKAALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQL 270 I +L ++ L R+++V R+ N + T P V+T +VVLGSGGHT EM +++ + ++ P +++ A SD SE K+ LP + V + +PRSR V QS++T+ LTTL+A S L+ R PD ++CNGPGTC+P+C + ++L LG+KH+K I+VES CRV+TLSL+GK+LY D F+VQWP +R KYP A+Y G+L Sbjct: 9 CINILTTLTCLFVVRMWIVYL-RIHNNKRTIPRAKTPSVKT-----MVVLGSGGHTFEMFQLIKNISN-KFSPRIYIIANSDTLSECKAKSFEESLDNLPENYV-------IERIPRSREVAQSYITSVLTTLKASIFSFLLICRHMPDCLICNGPGTCVPLCLSAFLLHSLGLKHIKTIYVESICRVSTLSLSGKILYHLTDYFIVQWPDIRKKYPHAKYFGRL 219
BLAST of EWM24298.1 vs. NCBI_GenBank
Match: gi|1069966519|ref|XP_018284115.1| (glycosyltransferase family 1 protein [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026581311|gb|OAD66075.1| glycosyltransferase family 1 protein [Phycomyces blakesleeanus NRRL 1555(-)]) HSP 1 Score: 185.652 bits (470), Expect = 4.244e-55 Identity = 89/187 (47.59%), Postives = 122/187 (65.24%), Query Frame = 0 Query: 85 RTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKA-ALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQL 270 RT +++LGSGGHT EM+ +++GL P+RY P ++V +E D S K + SE P + T+PR+R VGQSW T P + R L AS+ ++ PDVI+CNGPG+C+P+C YI R LG+K ++I++VES RV TLSLTGK+LY+ ADRF+VQWP L +YP+AEY G L Sbjct: 26 RTKSCKTMIILGSGGHTGEMVQLIKGLNPIRYNPRIYVVSEEDQLSCTKAKEHEMNIKSEFPCD---------IRTIPRARRVGQSWSTVPWSVFRTLLASLKMILLSPPDVIICNGPGSCVPVCMVAYIPRILGIKPIRIVYVESLARVKTLSLTGKILYFFADRFIVQWPNLIQRYPRAEYKGIL 203
BLAST of EWM24298.1 vs. NCBI_GenBank
Match: gi|470509860|ref|XP_004367764.1| (Alg14 family oligosaccharide biosynthesis protein [Acanthamoeba castellanii str. Neff] >gi|440801674|gb|ELR22683.1| Alg14 family oligosaccharide biosynthesis protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 186.037 bits (471), Expect = 5.283e-55 Identity = 97/194 (50.00%), Postives = 126/194 (64.95%), Query Frame = 0 Query: 80 TEQHVRTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKAALPPPSELPSSSVSFSKPDYVLT--VPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQLC 271 E +P + L+VLGSGGHT EML ++ L+P RY+P ++V A +DA S+ ++ SF T +PRSR VGQS+ ++ TT AL +V +V R P +ILCNGPGTCIPICA+ YIL+F G K VKI++VES RV TLSL+GKLLY AD FLVQWP L+ KYP A++LG+LC Sbjct: 41 NEDATTRSPVSTLIVLGSGGHTAEMLRLVGSLDPDRYQPRLYVWAATDAHSQ----------DKMQKFEASFGGVGQTRTAVIPRSREVGQSYFSSLFTTAFALLHAVGIVLRSSPQLILCNGPGTCIPICASAYILKFFGRK-VKIVYVESIARVETLSLSGKLLYRTADHFLVQWPQLQAKYPHAQFLGRLC 223
BLAST of EWM24298.1 vs. NCBI_GenBank
Match: gi|1009603722|ref|XP_015929886.1| (UDP-N-acetylglucosamine transferase subunit ALG14 homolog isoform X2 [Parasteatoda tepidariorum]) HSP 1 Score: 185.267 bits (469), Expect = 1.052e-54 Identity = 92/222 (41.44%), Postives = 138/222 (62.16%), Query Frame = 0 Query: 49 VLCIVSALLAFRLYVVLPNRVTNARVTPPSVTEQHVRTTPAALLVVLGSGGHTKEMLTMLQGLEPLRYRPLVFVRAESDARSEGMVKAALPPPSELPSSSVSFSKPDYVLTVPRSRSVGQSWLTTPLTTLRALAASVALVARLQPDVILCNGPGTCIPICAAGYILRFLGVKHVKIIFVESFCRVTTLSLTGKLLYWAADRFLVQWPGLRDKYPQAEYLGQL 270 +L ++ L R+++V R+ N + T P V+T ++VLGSGGHT EM +++ + ++ P +++ A SD SE K+ LP + V + +PRSR V QS++T+ LTTL+A S L+ R PD ++CNGPGTC+P+C + ++L LG+KH+K I+VES CRV+TLSL+GK+LY D F+VQWP +R KYP A+Y G+L Sbjct: 12 ILTTLTCLFVVRMWIVYL-RIHNNKRTIPRAKTPSVKT-----MIVLGSGGHTFEMFQLIKNISN-KFSPRIYIIANSDTLSECKAKSFEESLDNLPENYV-------IERIPRSREVAQSYITSVLTTLKASIFSFLLICRHMPDCLICNGPGTCVPLCLSAFLLHSLGLKHIKTIYVESICRVSTLSLSGKILYHLTDYFIVQWPDIRKKYPHAKYFGRL 219 The following BLAST results are available for this feature:
BLAST of EWM24298.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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