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Properties
| Property Name | Value |
|---|
| Product | las1-like family expressed |
| Orig transcript id | gnl|cribi|Naga_100047g17.6065.mrna |
| Orig protein id | gnl|cribi|Naga_100047g17.6065 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:376536..378065 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6375 ID=rna6375|Name=rna6375|organism=Nannochloropsis gaditana|type=mRNA|length=657bp
ATGCGCGAGGGTTTCCTCCTCCTCGTCCTGCTGCTGCTATCCAGCACGTC
TCAAGCATTCCTTCAACCAGCAATACAACACGAGCAAAATTCTAAGAGTC
ATCGATCCTTGTTTCAGCAAGGTAGATTTCATTCGCCGGCGGCCCTTCAC
GCCTCCCCTCCCAAGCGCCTCACTGTGACGGAACAGTTGCAGCTATCTCC
AAACCGCTGGAAGCGGAATGGTCAGCCGCTCGAGCCCGGTGTAGGGGGCA
TTTGGCCCGGTAAACCCGACGCAAAGAAATACAAGGTCACAGTTGTGGAC
CCTCGCACGAAGACGAATTACACGATGGACGTTCCCGAGGACCGGTACAT
TTTCTTTGCCTTTGAAGATTCAGGAGTAGATCTGCCCATGGTGAACGGCA
AGCGCATGTGCCGGAATGGGTGTTGCACGACCTGCGCGGTGAAAATGAAG
GAGGGGAAGGTCAAGATGGAGGCGGCCCTGGGTCTCCTGCGCGACATGAA
GAACAAGGGGTACGCCCTCTCGTGCTGCTCGTTGCCGAGGTCAGATATTG
TTTGCGAGCTTCAGGACGAGGACGAGGTGTATGAGGTGGGAAAGCGCCCA
AACACGATTTTGCTTGCTGTTACAGTGAGATTGAACTACTTTAAAATGCT
TTTCTGA back to topprotein sequence of rna6375 >rna6375-protein ID=rna6375-protein|Name=rna6375|organism=Nannochloropsis gaditana|type=polypeptide|length=509bp
MFGQPPPYRMNTTPRVLPWQDWAEWTETSNLLFSIDIERRVQGVGRVKAW
RARGRLPVAVDATAAILEVGLLDVHPNSTNSVRSPTELRYLYSMVLVRAI
NGLVEGCQTKFYAEPVHAVAARLGIPQWLVDLRHEATHASLPSLSALRMG
AQHLLDWLHRGYWEKQGQDLEQAAAAAHGLLLAYRSVALAVQEECPNALD
RACRLQREDAGSKELGSERGGIRTASDTHLAEALQALLCSVTPSFLTTFL
LPALVCIPHGRVGQDDIVRPSSWGECFLLPDSELEDRASGVTAKCSSTEG
CLPVSAELKTLQAIKHRRLYIPLLVRLQRRFPCFARSLFFRLVSPMGGGL
KWRGAGGKGPGTESEGARATEAAHFSSSLPAPTFGMWVSYLQSRDWHSHF
PYGRAEATFTLRRASGIRFNLRDKASASWTTAESDFMLSRASGGVLRRGL
GLGVGSKGRKGREGREGGEGGEGGRGGDEGWTLCQEWIPSPLGGPVMRRG
EDSVWTASV back to topmRNA from alignment at CM002468.1:376536..378065- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6375 ID=rna6375|Name=rna6375|organism=Nannochloropsis gaditana|type=mRNA|length=1530bp|location=Sequence derived from alignment at CM002468.1:376536..378065- (Nannochloropsis gaditana)
ATGTTTGGTCAACCTCCTCCCTACAGGATGAATACTACCCCGCGGGTCCT
CCCTTGGCAAGATTGGGCCGAGTGGACCGAGACAAGTAATTTGCTCTTCT
CCATAGACATTGAGCGTAGAGTACAGGGTGTGGGAAGGGTGAAAGCCTGG
CGTGCACGTGGCCGACTGCCTGTAGCTGTAGACGCTACTGCTGCGATATT
AGAGGTTGGCCTTCTGGATGTGCATCCCAACAGTACAAATTCTGTGCGCT
CGCCGACAGAATTGCGTTATTTATATAGTATGGTGCTGGTGCGTGCAATA
AATGGACTGGTGGAAGGGTGTCAGACCAAATTCTATGCCGAGCCCGTCCA
TGCCGTGGCGGCTCGCCTTGGGATCCCTCAGTGGTTGGTGGACCTTCGGC
ACGAAGCCACGCATGCGAGCCTCCCATCCCTCTCCGCCCTGCGCATGGGC
GCACAGCATTTGCTGGACTGGCTTCACAGGGGTTACTGGGAGAAGCAGGG
TCAGGACTTGGAGCAGGCGGCTGCGGCTGCCCATGGTTTGCTACTCGCCT
ACCGCTCTGTCGCCCTCGCAGTCCAGGAAGAGTGTCCCAACGCCTTGGAC
CGCGCTTGTCGGTTGCAGAGGGAAGATGCAGGGTCCAAAGAGCTCGGCAG
CGAAAGAGGAGGGATCAGAACAGCCAGCGACACCCACCTTGCCGAAGCTT
TACAGGCTCTCCTCTGCTCAGTTACACCGTCTTTTCTTACTACCTTCCTG
CTCCCCGCCCTTGTGTGCATACCACACGGGAGGGTGGGCCAGGACGATAT
TGTGCGGCCGTCATCTTGGGGGGAATGTTTCCTGCTCCCTGACTCCGAGC
TGGAGGATCGAGCATCGGGAGTCACGGCGAAGTGTTCGTCGACGGAGGGA
TGCCTGCCTGTATCTGCTGAGTTGAAGACTTTGCAGGCGATCAAGCACCG
GCGACTATACATACCCCTGCTGGTCCGCCTTCAGAGGCGCTTCCCTTGCT
TTGCGCGCTCCCTGTTCTTCCGCCTCGTCTCGCCCATGGGGGGAGGGTTA
AAGTGGCGGGGAGCAGGCGGAAAGGGACCAGGCACAGAGAGTGAGGGGGC
CAGGGCGACGGAAGCCGCGCATTTCTCCTCTTCCCTGCCTGCTCCCACCT
TTGGGATGTGGGTGAGCTACTTGCAAAGCCGCGACTGGCACTCCCACTTT
CCCTACGGTAGGGCCGAGGCGACATTCACCCTGCGAAGGGCTTCCGGCAT
CCGGTTTAACCTCAGAGACAAGGCTTCAGCCAGCTGGACGACCGCCGAGA
GTGACTTCATGCTGTCTCGCGCGAGCGGCGGAGTGTTACGACGGGGTCTG
GGGCTGGGCGTTGGGTCCAAGGGACGAAAGGGACGAGAGGGACGAGAGGG
GGGTGAGGGAGGGGAAGGGGGGCGGGGGGGCGATGAAGGTTGGACGCTGT
GTCAAGAGTGGATCCCGAGCCCTCTGGGAGGACCTGTCATGCGGAGGGGG
GAGGATTCGGTGTGGACGGCAAGCGTGTGA back to topCoding sequence (CDS) from alignment at CM002468.1:376536..378065- >rna6375 ID=rna6375|Name=rna6375|organism=Nannochloropsis gaditana|type=CDS|length=1530bp|location=Sequence derived from alignment at CM002468.1:376536..378065- (Nannochloropsis gaditana)
ATGTTTGGTCAACCTCCTCCCTACAGGATGAATACTACCCCGCGGGTCCT
CCCTTGGCAAGATTGGGCCGAGTGGACCGAGACAAGTAATTTGCTCTTCT
CCATAGACATTGAGCGTAGAGTACAGGGTGTGGGAAGGGTGAAAGCCTGG
CGTGCACGTGGCCGACTGCCTGTAGCTGTAGACGCTACTGCTGCGATATT
AGAGGTTGGCCTTCTGGATGTGCATCCCAACAGTACAAATTCTGTGCGCT
CGCCGACAGAATTGCGTTATTTATATAGTATGGTGCTGGTGCGTGCAATA
AATGGACTGGTGGAAGGGTGTCAGACCAAATTCTATGCCGAGCCCGTCCA
TGCCGTGGCGGCTCGCCTTGGGATCCCTCAGTGGTTGGTGGACCTTCGGC
ACGAAGCCACGCATGCGAGCCTCCCATCCCTCTCCGCCCTGCGCATGGGC
GCACAGCATTTGCTGGACTGGCTTCACAGGGGTTACTGGGAGAAGCAGGG
TCAGGACTTGGAGCAGGCGGCTGCGGCTGCCCATGGTTTGCTACTCGCCT
ACCGCTCTGTCGCCCTCGCAGTCCAGGAAGAGTGTCCCAACGCCTTGGAC
CGCGCTTGTCGGTTGCAGAGGGAAGATGCAGGGTCCAAAGAGCTCGGCAG
CGAAAGAGGAGGGATCAGAACAGCCAGCGACACCCACCTTGCCGAAGCTT
TACAGGCTCTCCTCTGCTCAGTTACACCGTCTTTTCTTACTACCTTCCTG
CTCCCCGCCCTTGTGTGCATACCACACGGGAGGGTGGGCCAGGACGATAT
TGTGCGGCCGTCATCTTGGGGGGAATGTTTCCTGCTCCCTGACTCCGAGC
TGGAGGATCGAGCATCGGGAGTCACGGCGAAGTGTTCGTCGACGGAGGGA
TGCCTGCCTGTATCTGCTGAGTTGAAGACTTTGCAGGCGATCAAGCACCG
GCGACTATACATACCCCTGCTGGTCCGCCTTCAGAGGCGCTTCCCTTGCT
TTGCGCGCTCCCTGTTCTTCCGCCTCGTCTCGCCCATGGGGGGAGGGTTA
AAGTGGCGGGGAGCAGGCGGAAAGGGACCAGGCACAGAGAGTGAGGGGGC
CAGGGCGACGGAAGCCGCGCATTTCTCCTCTTCCCTGCCTGCTCCCACCT
TTGGGATGTGGGTGAGCTACTTGCAAAGCCGCGACTGGCACTCCCACTTT
CCCTACGGTAGGGCCGAGGCGACATTCACCCTGCGAAGGGCTTCCGGCAT
CCGGTTTAACCTCAGAGACAAGGCTTCAGCCAGCTGGACGACCGCCGAGA
GTGACTTCATGCTGTCTCGCGCGAGCGGCGGAGTGTTACGACGGGGTCTG
GGGCTGGGCGTTGGGTCCAAGGGACGAAAGGGACGAGAGGGACGAGAGGG
GGGTGAGGGAGGGGAAGGGGGGCGGGGGGGCGATGAAGGTTGGACGCTGT
GTCAAGAGTGGATCCCGAGCCCTCTGGGAGGACCTGTCATGCGGAGGGGG
GAGGATTCGGTGTGGACGGCAAGCGTGTGA back to top
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