rna6369, rna6369 (mRNA) Nannochloropsis gaditana

Overview
Namerna6369
Unique Namerna6369
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1233
Alignment locationCM002468.1:362911..364142 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100047g11.6054.mrna
Orig protein idgnl|cribi|Naga_100047g11.6054
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:362911..364142 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100047g11gene6153Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6369rna6369-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24291.1cds6354Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6369 ID=rna6369|Name=rna6369|organism=Nannochloropsis gaditana|type=mRNA|length=1233bp
ATGGTGAATGAGTGCCCTCTATGCCGGGCGAGTGCCGCGGACGGGCTATC
TTGCTCGGGATGTGTCAAGAACAATCTCTACTACAAGCAGCAGGCCATTG
CCTACAAGAAAATGTCCCTACGCGACGCTTACGAGCAAGCCAAGTCGGTA
CTGACTACGAACCAGCCAGTATTTCGAGAACAACAGGCACTGGCGGCGTT
GATGAGGAGACAAGGGGAGTTGAAAACTCGATTACAGGAGACGGCCGAAC
GCGTTCGGGATTTGCGTTTAGCCGTGGCTCGAAAAACATTTGCGTTGGAG
GAACGCCGGAAAGCCGTGGACGTAGCCAGGCAACGACTGGAGGAGGTGAA
ACGCTGGCAGGGTAGTCAATCGACGCCCGTGCAGCAGGGACTGCGGTGGT
ATAAAGAGCAAACGATGGAGGTGGTGCAGCAGCGCGTGTGGACGCGTGTG
TTGGAACACTTTGTGGTTTTCCCGATCGAGGCGGATATCCCCGTTCACGT
CTCAGGAAAAGGAACGCAGGAGCAGGCTCCCGCTTTCATTCCCCCTCCAT
GTCCGCCCTCGCGCGCCTCCGCTGGTCCGAAACCCCTTACGGGCGTCAGC
ACCATCGTAGGTTTGCCTCTACCCAACGCAGGAAATTATCGCGAACTCGG
CCTTCCAGACGAGGTGTGCGAAACCGCCCTTTACCTGGTTGCCCGCGTGA
CCTGGTCGTTGGCAGAGACCCTTGGAATGAGGCTCCCCCACCCCCTGCGC
TTCCCTGCCGGCAAGTCCTACGCCCTCATCGCTGAAGATGCACAGAGGCG
CACCGAGTTCGCCCTCAGCCCCTCCTTCTACCACGGCGGCGGCAGGAGCA
ATGCAACCTCGACCGCGCCAGCCTATCGCCACCCCCCGAGCCGGAGGAGA
GGCGCCGAGTGCGCGGGCGCGGACGGCACGGACCCCTTCTCCCTGGGCGT
GGAGGCCCTCCAGCTGAACGTGCACCAGCTAGCCGTCTCCCCAGCGGGTG
TCGGGGTGGACGCGCGCGAGCTCTGGGGAAAGGAGGCAGTGCTTTTGAAT
TTATGGGCCGTGCAACGCCGGGCAGCGGAGGTGGTGAAAGCTTACGAGGG
CCTGCCCGATGTGCCCCTTCCGAGGGTGGAGCGGGGGAGGATGGAGGGGA
AAGCGGAGGGGGCGACCGGGGGCGGGAGGGGGAAGAGAGAGATGAAGGCT
TGCAGTAGGGTGATATGCGATGTAAATATGTGA
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protein sequence of rna6369

>rna6369-protein ID=rna6369-protein|Name=rna6369|organism=Nannochloropsis gaditana|type=polypeptide|length=313bp
MPLCLQSYLLVVLLAIPSTGFLFFPARTPNHGQKVIHRMTAPANPIMHIS
FSSSAATASDVEALNSERFDSLVKELLAASDLPALALSKADAFDYHFMSH
LMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKV
MEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLG
EERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEAAE
GEGEEGEEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDRAKG
LEREISIVVQACG
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mRNA from alignment at CM002468.1:362911..364142-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6369 ID=rna6369|Name=rna6369|organism=Nannochloropsis gaditana|type=mRNA|length=1232bp|location=Sequence derived from alignment at CM002468.1:362911..364142- (Nannochloropsis gaditana)
ATGCCTCTGTGTTTGCAGTCCTACTTGCTAGTGGTACTGCTCGCTATTCC
CTCCACTGGGTTCCTTTTTTTCCCCGCGCGGACTCCGAACCATGGGCAGA
AAGTAATACACCGCATGACCGCACCTGCCAACCCAATAATGCACATCTCC
TTCAGCTCTTCGGCAGCAACGGCCTCAGATGTGGAAGCTTTAAACTCTGA
AAGGTACGTTGGCTAAATATAGAAATCGAGGAGGCTGAAGGTATACGTCA
GCCACCAGTGATGCTTTCCGAGATGGTGTCGTGATCACTTTGTTCTATAA
TCCAGCGAATTCGGTGGCTTGCGGATGTCTCTAACATCTTCGACCGTTGT
TTTGAGCGCTGAAATTCTGACACCGTCCTTGCTTTCATCCCCTCTTCTCT
TCCCTATTCCTCAGGTTTGACAGCCTCGTTAAGGAACTCCTCGCAGCCTC
TGACCTTCCCGCCCTCGCTCTCAGCAAAGCCGACGCCTTCGACTACCACT
TTATGAGCCATTTGATGCAACGGTTGCAGGCTTCCACGGACGATGAAGAA
ATTGCGGCCTTGAACAAGGTTGGGGAGGCCGTCAATTTCGCCATGCAGCA
GCGACTTGCGAAGGCCGACTTCATCTTGAGGGGCATCTTGAAGAGTGGGG
ACCTGAAGGTGAGAGGCGAGAGGCTTCTGATTGTCTCACGACCCGTGCTG
TTTGGAAACTCATGACTTCTATACCCTTTTATTCCAGGTGATGGAGGCGA
AGATGCGCAAACACCTGCGCGCCAACGAGTTGGACACGGCCTTCGACGTG
ATCCTCAACTACAACGCCCAGCAAGCCCGCGAGCACGAGGGAAACGAAGC
CGCCGCAAACATCCTACAGCACTTGGCCACGCTTCTGGGCGAAGAAAGGG
ATAAGAAGCTTCCTCCCCCCACGCGGCTCTTGCGCATGCTCTTGCGCAGC
ACCGACGAAGCGGAGCGACAAGGCATGCTCTTGGAGAAACTCCTACTGGC
GAGGCGGCCCGCGCGTCCGCGACGGGAGGAAGCGGCAGAGGGGGAAGGGG
AGGAGGGAGAGGAGGAATGGACCTGGGGTCCCCCGGAGGTGGCGCCGGAG
GATCTGCGACAGGCGTTGAGGGACTTCCTGGAGGAGGTCCAGGCGTTCGA
GGAGGAGGTGGAGGCGGAGGTTGTGGACCGAGCCAAGGGGCTCGAGCGGG
AGATATCGATAGTGGTGCAGGCGTGTGGGTAA
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Coding sequence (CDS) from alignment at CM002468.1:362911..364142-

>rna6369 ID=rna6369|Name=rna6369|organism=Nannochloropsis gaditana|type=CDS|length=2826bp|location=Sequence derived from alignment at CM002468.1:362911..364142- (Nannochloropsis gaditana)
GTGATGGAGGCGAAGATGCGCAAACACCTGCGCGCCAACGAGTTGGACAC
GGCCTTCGACGTGATCCTCAACTACAACGCCCAGCAAGCCCGCGAGCACG
AGGGAAACGAAGCCGCCGCAAACATCCTACAGCACTTGGCCACGCTTCTG
GGCGAAGAAAGGGATAAGAAGCTTCCTCCCCCCACGCGGCTCTTGCGCAT
GCTCTTGCGCAGCACCGACGAAGCGGAGCGACAAGGCATGCTCTTGGAGA
AACTCCTACTGGCGAGGCGGCCCGCGCGTCCGCGACGGGAGGAAGCGGCA
GAGGGGGAAGGGGAGGAGGGAGAGGAGGAATGGACCTGGGGTCCCCCGGA
GGTGGCGCCGGAGGATCTGCGACAGGCGTTGAGGGACTTCCTGGAGGAGG
TCCAGGCGTTCGAGGAGGAGGTGGAGGCGGAGGTTGTGGACCGAGCCAAG
GGGCTCGAGCGGGAGATATCGATAGTGGTGCAGGCGTGTGGGTAAGTTTG
ACAGCCTCGTTAAGGAACTCCTCGCAGCCTCTGACCTTCCCGCCCTCGCT
CTCAGCAAAGCCGACGCCTTCGACTACCACTTTATGAGCCATTTGATGCA
ACGGTTGCAGGCTTCCACGGACGATGAAGAAATTGCGGCCTTGAACAAGG
TTGGGGAGGCCGTCAATTTCGCCATGCAGCAGCGACTTGCGAAGGCCGAC
TTCATCTTGAGGGGCATCTTGAAGAGTGGGGACCTGAAGATGCCTCTGTG
TTTGCAGTCCTACTTGCTAGTGGTACTGCTCGCTATTCCCTCCACTGGGT
TCCTTTTTTTCCCCGCGCGGACTCCGAACCATGGGCAGAAAGTAATACAC
CGCATGACCGCACCTGCCAACCCAATAATGCACATCTCCTTCAGCTCTTC
GGCAGCAACGGCCTCAGATGTGGAAGCTTTAAACTCTGAAAGGTGATGGA
GGCGAAGATGCGCAAACACCTGCGCGCCAACGAGTTGGACACGGCCTTCG
ACGTGATCCTCAACTACAACGCCCAGCAAGCCCGCGAGCACGAGGGAAAC
GAAGCCGCCGCAAACATCCTACAGCACTTGGCCACGCTTCTGGGCGAAGA
AAGGGATAAGAAGCTTCCTCCCCCCACGCGGCTCTTGCGCATGCTCTTGC
GCAGCACCGACGAAGCGGAGCGACAAGGCATGCTCTTGGAGAAACTCCTA
CTGGCGAGGCGGCCCGCGCGTCCGCGACGGGAGGAAGCGGCAGAGGGGGA
AGGGGAGGAGGGAGAGGAGGAATGGACCTGGGGTCCCCCGGAGGTGGCGC
CGGAGGATCTGCGACAGGCGTTGAGGGACTTCCTGGAGGAGGTCCAGGCG
TTCGAGGAGGAGGTGGAGGCGGAGGTTGTGGACCGAGCCAAGGGGCTCGA
GCGGGAGATATCGATAGTGGTGCAGGCGTGTGGGTAAGTTTGACAGCCTC
GTTAAGGAACTCCTCGCAGCCTCTGACCTTCCCGCCCTCGCTCTCAGCAA
AGCCGACGCCTTCGACTACCACTTTATGAGCCATTTGATGCAACGGTTGC
AGGCTTCCACGGACGATGAAGAAATTGCGGCCTTGAACAAGGTTGGGGAG
GCCGTCAATTTCGCCATGCAGCAGCGACTTGCGAAGGCCGACTTCATCTT
GAGGGGCATCTTGAAGAGTGGGGACCTGAAGATGCCTCTGTGTTTGCAGT
CCTACTTGCTAGTGGTACTGCTCGCTATTCCCTCCACTGGGTTCCTTTTT
TTCCCCGCGCGGACTCCGAACCATGGGCAGAAAGTAATACACCGCATGAC
CGCACCTGCCAACCCAATAATGCACATCTCCTTCAGCTCTTCGGCAGCAA
CGGCCTCAGATGTGGAAGCTTTAAACTCTGAAAGGTGATGGAGGCGAAGA
TGCGCAAACACCTGCGCGCCAACGAGTTGGACACGGCCTTCGACGTGATC
CTCAACTACAACGCCCAGCAAGCCCGCGAGCACGAGGGAAACGAAGCCGC
CGCAAACATCCTACAGCACTTGGCCACGCTTCTGGGCGAAGAAAGGGATA
AGAAGCTTCCTCCCCCCACGCGGCTCTTGCGCATGCTCTTGCGCAGCACC
GACGAAGCGGAGCGACAAGGCATGCTCTTGGAGAAACTCCTACTGGCGAG
GCGGCCCGCGCGTCCGCGACGGGAGGAAGCGGCAGAGGGGGAAGGGGAGG
AGGGAGAGGAGGAATGGACCTGGGGTCCCCCGGAGGTGGCGCCGGAGGAT
CTGCGACAGGCGTTGAGGGACTTCCTGGAGGAGGTCCAGGCGTTCGAGGA
GGAGGTGGAGGCGGAGGTTGTGGACCGAGCCAAGGGGCTCGAGCGGGAGA
TATCGATAGTGGTGCAGGCGTGTGGGTAAGTTTGACAGCCTCGTTAAGGA
ACTCCTCGCAGCCTCTGACCTTCCCGCCCTCGCTCTCAGCAAAGCCGACG
CCTTCGACTACCACTTTATGAGCCATTTGATGCAACGGTTGCAGGCTTCC
ACGGACGATGAAGAAATTGCGGCCTTGAACAAGGTTGGGGAGGCCGTCAA
TTTCGCCATGCAGCAGCGACTTGCGAAGGCCGACTTCATCTTGAGGGGCA
TCTTGAAGAGTGGGGACCTGAAGATGCCTCTGTGTTTGCAGTCCTACTTG
CTAGTGGTACTGCTCGCTATTCCCTCCACTGGGTTCCTTTTTTTCCCCGC
GCGGACTCCGAACCATGGGCAGAAAGTAATACACCGCATGACCGCACCTG
CCAACCCAATAATGCACATCTCCTTCAGCTCTTCGGCAGCAACGGCCTCA
GATGTGGAAGCTTTAAACTCTGAAAG
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Synonyms
Publications