EWM24291.1, cds6354 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24291.1 vs. NCBI_GenBank
Match: gi|585105683|gb|EWM24291.1| (hypothetical protein Naga_100047g11 [Nannochloropsis gaditana]) HSP 1 Score: 634.024 bits (1634), Expect = 0.000e+0 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0 Query: 1 MPLCLQSYLLVVLLAIPSTGFLFFPARTPNHGQKVIHRMTAPANPIMHISFSSSAATASDVEALNSERFDSLVKELLAASDLPALALSKADAFDYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEAAEGEGEEGEEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDRAKGLEREISIVVQACG 313 MPLCLQSYLLVVLLAIPSTGFLFFPARTPNHGQKVIHRMTAPANPIMHISFSSSAATASDVEALNSERFDSLVKELLAASDLPALALSKADAFDYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEAAEGEGEEGEEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDRAKGLEREISIVVQACG Sbjct: 1 MPLCLQSYLLVVLLAIPSTGFLFFPARTPNHGQKVIHRMTAPANPIMHISFSSSAATASDVEALNSERFDSLVKELLAASDLPALALSKADAFDYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEAAEGEGEEGEEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDRAKGLEREISIVVQACG 313
BLAST of EWM24291.1 vs. NCBI_GenBank
Match: gi|553179368|ref|XP_005852689.1| (hypothetical protein NGA_0310502 [Nannochloropsis gaditana CCMP526] >gi|422295843|gb|EKU23142.1| hypothetical protein NGA_0310502 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 627.091 bits (1616), Expect = 0.000e+0 Identity = 309/311 (99.36%), Postives = 310/311 (99.68%), Query Frame = 0 Query: 3 LCLQSYLLVVLLAIPSTGFLFFPARTPNHGQKVIHRMTAPANPIMHISFSSSAATASDVEALNSERFDSLVKELLAASDLPALALSKADAFDYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEAAEGEGEEGEEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDRAKGLEREISIVVQACG 313 +CLQSYLLVVLLAIPSTGFLFFPARTPNHGQKVIHRMTAPANPIMHISFSSSAATASDVEALNSERFDSLVKELLAASDLPALALSKADAFDYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREE AEGEGEEGEEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDRAKGLEREISIVVQACG Sbjct: 1 MCLQSYLLVVLLAIPSTGFLFFPARTPNHGQKVIHRMTAPANPIMHISFSSSAATASDVEALNSERFDSLVKELLAASDLPALALSKADAFDYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEVAEGEGEEGEEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDRAKGLEREISIVVQACG 311
BLAST of EWM24291.1 vs. NCBI_GenBank
Match: gi|298713792|emb|CBJ27164.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 106.686 bits (265), Expect = 5.585e-23 Identity = 85/290 (29.31%), Postives = 146/290 (50.34%), Query Frame = 0 Query: 27 RTPNHGQKVIHRMTAPANPIMHISFSSSAATASDVEALNSERFDSLVKELLA--ASDLPALALSKADAFDYHFMSHLMQRLQAS-TDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILK-SGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEAAEGEGEEGEEEWTWGPPE---VAPEDLRQALRDFLEEVQAFEEEVEAEVVDRAKGLEREISIVV 309 R P+ G +H M A + + SS T S+ ++ D+L+ + + + ++ A D D+ ++HL R++A E AL V E +N AMQ+RLA AD LR +L + D+K ME ++R R +++ AF V+++ N Q+A++ EG + A +L HL T + +D++L P +LLR LLR+ + R+ +L ++L L R PP+ V P L+QA+ D + +V+ + ++ + D KGL+ E++ VV Sbjct: 62 RGPSRGLLPMH-MLAGGDAV-----QSSVGTKSEEHSV----LDALIDQFTSPKSGNVTATVEEYLDLCDHALLTHLRGRIEAEEAQSPEATALKHVEEEINMAMQRRLAAADSNLRQVLDLAPDIKKMEGRIRTLFREGKVNMAFMVMISMNLQRAKDAEGADHAVMLLTHLTTFIMMIQDERLNPEEKLLRTLLRTDCDGVRKSILQDRLQLPNNDVFLER------------------PPDKDKVQPHLLQQAITDMITQVEDIGQAIDVGMTDSLKGLQVEVNTVV 323
BLAST of EWM24291.1 vs. NCBI_GenBank
Match: gi|1189381844|gb|OSX69489.1| (hypothetical protein BU14_1464s0002 [Porphyra umbilicalis]) HSP 1 Score: 75.8702 bits (185), Expect = 9.474e-12 Identity = 77/245 (31.43%), Postives = 118/245 (48.16%), Query Frame = 0 Query: 69 FDSLVKELLAASDLPALALSKA-----DAFDYHFMSHLMQR-LQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEA-AEGEGEEGEEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDR--AKGLERE 304 +D+L+ E+ A+ +L+ A + D F+ HL Q+ L ASTD E A + V AV M R++ A + ++ +GD + M ++ L+ E+D AF ++L N +QA+ G A +L L E RD ++PP L+R LLR+ D ER+ ML L PR++ A A+G G V + L ALR +E+ V+A +V+R A GLE E Sbjct: 161 YDALLAEIQGAASAHGGSLTAAVRRAYNRVDMRFLQHLAQKNLDASTDAER-AEIEAVQAAVTQEMTVRMSAASAAFKSVVTAGDEEAMYRQLALLLQKGEMDEAFLLLLAGNLEQAK-AAGVAPAVEVLNRLQKRTAELRDNRVPPEVALVRKLLRTPDAVERKAMLTAALT-------PRKKIALADGSSSAG--------VVVDGKKLVVALRRLVEDFG----NVDASIVERVDALGLEAE 384
BLAST of EWM24291.1 vs. NCBI_GenBank
Match: gi|298709146|emb|CBJ31091.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.4034 bits (176), Expect = 1.027e-10 Identity = 63/218 (28.90%), Postives = 108/218 (49.54%), Query Frame = 0 Query: 69 FDSLVKELLAASDLPAL---ALSKADAFDYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEAAEGEGEEGEEEWTWGPPEVAP----EDLRQALRDF 279 +++L+ +LL D +L + D D F++ L Q+ Q + + AAL ++G+++N MQ+R+A+A L+ IL G+ + ME ++ E+D A ++L N QQA E + A +L+ L D+K+ P RL+R LLR+ D R +L + A +R + +G E E P+VAP E ++ +R+F Sbjct: 44 YENLLGKLLNREDGESLEDAVETNYDQVDIQFLTLLNQKAQEAEGTDAAAALTRLGDSINNTMQRRMAQASERLQKILTVGNPERMEETIKAMAERGEVDDALVLLLQANLQQAEEADAG-PAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTK--------AFRQRAKVVLADGSETSE-----APDVAPPKFIETVKGIIRNF 247
BLAST of EWM24291.1 vs. NCBI_GenBank
Match: gi|551574851|ref|XP_005773168.1| (hypothetical protein EMIHUDRAFT_424731 [Emiliania huxleyi CCMP1516] >gi|485624738|gb|EOD20739.1| hypothetical protein EMIHUDRAFT_424731 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 71.633 bits (174), Expect = 1.973e-10 Identity = 84/301 (27.91%), Postives = 134/301 (44.52%), Query Frame = 0 Query: 12 VLLAIPSTGFLFFP---ARTPNHGQKVIHRMTAPANPIMHISFSSSAATASDVEALNSERFDS------LVKELLAASDLPALALSKADA-FDYHFMSHLMQ-RLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQARE-HEGNEAAANILQHLATLLGEERDKKLPPPTRLLRMLLRSTDEAERQGMLLEKLLLARRPA---RPRREEAAEGEGEEGEEEWTWGPPEVAPEDLRQALRDFLEEVQAFEEEVEAEVVDR 297 +L A+ S + P AR+ + R AP I+ + SS + +R DS + + L+ + A ++K A FDY FM L + + QA+ +E + +V A+ M +R+ +A L+ +L S VME +M R +LD A +L N Q+A E E + A L L + EE DKK+PP L+R LLR + R +L EK+ +R + E+AA + E + + G P+V L QA ++ +EE + V+R Sbjct: 1 MLAALASAVAGYQPPCLARSSGLQSTTLRRAVAPVANIIDPNEPSSEVRRAGPADAPEQRIDSEETYRIMFRTLMETENKVADEVAKNYALFDYGFMQRLEEAKAQAAPGSDEAGRIEEVDVALKSEMARRMGEAAEALKSVLTSPSAVVMEGRMTGLARQGKLDDALLQLLEANLQRASEAGEAGKGAVAALSKLKQRVMEELDKKVPPDMALVRQLLRMESKPARLQLLKEKMTPKQRTSLVMATSVEDAARNDLEAADND---GEPDVDSRRLAQAFKEIKGRFGNVDEEYDTGFVER 298
BLAST of EWM24291.1 vs. NCBI_GenBank
Match: gi|219122225|ref|XP_002181451.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407437|gb|EEC47374.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 62.7734 bits (151), Expect = 2.262e-7 Identity = 64/219 (29.22%), Postives = 101/219 (46.12%), Query Frame = 0 Query: 69 FDSLVKELL----AASDLPALALSKADAFDYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYNAQQAREHEGNEAAANILQHLATLLGEERDKKLPPP-TRLLRMLLRSTDEAERQGMLLEKLLLARRPARPRREEAAEG--EGEEGEEEWTWGPPEVAPEDLRQALRDFL 280 ++ L+K++L A ++ S D FD F+ L +R+ DD + + EA+ Q R+A A L+ +L GD ME + + R ++D F ++L N QAR+ G AAN+++ L +E+DK+ RL+R LL D ER+ +L E P E A+ +GE +EE P+V P D A + L Sbjct: 221 YEGLLKKVLPPYRAGDTSRSVVFSYYDQFDAQFVKVLAERVNNGDDDAK-----DLLEALAVEQQIRIATATETLKSVLTLGDPMKMEGAIVRLAREGKVDEPFLLLLEANETQARDA-GATDAANLMKRLKKRATDEKDKQSSSKEIRLIRKLLHEDDPNEREKILEEAFTPKNVLIVPGTAENAQKAVDGEAPDEEQPM--PDVPPPDFINACKAVL 431
BLAST of EWM24291.1 vs. NCBI_GenBank
Match: gi|676377785|ref|XP_009032171.1| (hypothetical protein AURANDRAFT_60414 [Aureococcus anophagefferens] >gi|323456630|gb|EGB12496.1| hypothetical protein AURANDRAFT_60414 [Aureococcus anophagefferens]) HSP 1 Score: 62.3882 bits (150), Expect = 3.777e-7 Identity = 62/175 (35.43%), Postives = 93/175 (53.14%), Query Frame = 0 Query: 62 EALNSERFDSLVKELLAASDLPALALSKADAF---DYHFMSHLMQRLQASTDDEEIAALNKVGEAVNFAMQQRLAKADFILRGILKSGDLKVMEAKMRKHLRANELDTAFDVILNYN-AQQAREHEGNEAAANILQHLATLLGEERDKK-LPPPTRLLRMLLRSTDEAERQGMLL 231 EAL + +D+L+ L+AA+ +A + AF DY ++ +R QA DD E AL V +AVN +RL +A L +LK+GD M AK+ + + +DT +L N Q A AA ++++LA+ +E DK+ P RLLR LLRS DE R+ +L+ Sbjct: 496 EALRT--YDALLTSLVAAAADGNVASAVEGAFERCDYSLLTLASERQQAGGDDAE--ALAAVIDAVNGLAAKRLEQAAARLGSVLKAGDPSKMMAKITELAVSGGVDTQLVELLEANRQQAAAAGPAGAQAAELMKNLASRCRDEMDKRETGPEIRLLRALLRSDDEDTRKQLLV 666 The following BLAST results are available for this feature:
BLAST of EWM24291.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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