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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100047g10.6062.mrna |
Orig protein id | gnl|cribi|Naga_100047g10.6062 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002468.1 | supercontig | CM002468.1:360680..362752 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6368 ID=rna6368|Name=rna6368|organism=Nannochloropsis gaditana|type=mRNA|length=1116bp ATGCCAGGGCCTTTGCTGGAAGAAAGCTCGTTCGCCACGCTCTTCCCCAA ATACCGGGAGAAGTATCTGCGGGAGGTGTGGCCGGTCGTGACACGGGCCT TGGAGAAGGTGGGCGTGGCCTGCGAGCTGAATATCATTGAGGGGTCCATG ACCGTGCGGACGACACGCAAGACGAGCGATCCGTACGTGGTAGTAAAAGC GAGGGACCTGATCAAGCTGTTGGCGCGCTCCATCCCCGTGCAACAGGCCG TCAAGGTATTGGAGGATGAGGTCGCCTGCGACATTATCAAGATCGGCGGC ATCGTCCGGAACAAGGAGAGGTTTGTCAAACGCCGGCAGAGACTGGTGGG CCCGGATGGCGCGACCCTCAAGGCGCTGGAGCTTCTGACCGGCTGCTTTA TCTTGGTGCAGGGGAACACCGTGGCTGCGATGGGCCCTTACAAAGGGATC AAGCTCGTCCGCAACGTGGTCGTGGACTGCATGAAGAATATCCACCCCAT ATATCATATCAAGACCCTTATGATCAAAAGGGAATTGGCCAAGGATCCCA CATTGGCCCAGGAGAACTGGGACCGTTTCCTTCCGCAGTTCAAGAAGAAG AACGTGCCTAGACACAAGCCACAGGTAGTACGACCCAAAAAGGCATACAC GCCCTTCCCTCCGCCCCAACAACCCTCCAAGATCGATTTACAGCTCGAAT CTGGCGAGTATTTTCTGACAGAGCAACAGCGAAAATTGAAGAAGAAGCAG GAGAAACAGGCACAGGCAACGGAGAGGGCGGCGACTAAGCGGGAGGAGCG GGAGAAGGAGTTTGTCGCGCCTGCTGAGGAGAACGGGGGCAGGGAAGGCC CCAAGCTTGGTGGAATAGACAGGAAACGTTTAAAAAAGGGAGTTTCAATA AACAAAAACGATGACAAAGAACAGGAAAACGAGAAAAAAGCGAAGAAACG TAGTCTTAAAGAGATGACCGACGGGTTTATTCAGAAGAGCAAAAGTAAGA TGGGTAATGCGCTTTCGGCAAATCAGCACCAGGGGGAATATGTCGAGGAA TCTATGATGAAGCTTGCCTCGACAGAGATAAGCAAGAAGGACAAGAAGAA GAAGCTAAAAAAATAG back to topprotein sequence of rna6368 >rna6368-protein ID=rna6368-protein|Name=rna6368|organism=Nannochloropsis gaditana|type=polypeptide|length=410bp MVNECPLCRASAADGLSCSGCVKNNLYYKQQAIAYKKMSLRDAYEQAKSV LTTNQPVFREQQALAALMRRQGELKTRLQETAERVRDLRLAVARKTFALE ERRKAVDVARQRLEEVKRWQGSQSTPVQQGLRWYKEQTMEVVQQRVWTRV LEHFVVFPIEADIPVHVSGKGTQEQAPAFIPPPCPPSRASAGPKPLTGVS TIVGLPLPNAGNYRELGLPDEVCETALYLVARVTWSLAETLGMRLPHPLR FPAGKSYALIAEDAQRRTEFALSPSFYHGGGRSNATSTAPAYRHPPSRRR GAECAGADGTDPFSLGVEALQLNVHQLAVSPAGVGVDARELWGKEAVLLN LWAVQRRAAEVVKAYEGLPDVPLPRVERGRMEGKAEGATGGGRGKREMKA CSRVICDVNM back to topmRNA from alignment at CM002468.1:360680..362752+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6368 ID=rna6368|Name=rna6368|organism=Nannochloropsis gaditana|type=mRNA|length=2073bp|location=Sequence derived from alignment at CM002468.1:360680..362752+ (Nannochloropsis gaditana) ATGGTGAATGAGTGCCCTCTATGCCGGGCGAGTGCCGCGGACGGGCTATC
TTGCTCGGGATGTGTCAAGAACAATCTCTACTACAAGCAGCAGGCCATTG
CCTACAAGAAAATGTCCCTACGCGACGCTTACGAGCAAGCCAAGTCGGTA
CTGACTACGAACCAGCCAGTATTTCGAGAACAACAGGCACTGGCGGCGTT
GATgaggagacaaggggagTTGAAAACTCGATTACAGGAGGTGATCAGGA
GAAGAACGGGTCACCCTTTTTTTTCCGCCCCTGATTGGCCCTGATCCCAC
GGCACCGTCTCACACCAATATTTATCCCTACATATTCTTCCATTCGTACA
ATCAGACGGCCGAACGCGTTCGGGATTTGCGTTTAGCCGTGGCTCGAAAA
ACATTTGCGTTGGAGGAACGCCGGAAAGCCGTGGACGTAGCCAGGCAACg
actggaggaggtgaaacGCTGGCAGGGTAGTCAATCGACGCCCGTGCAGC
AGGGACTGCGGTGGTATAAAGAGCAAacgatggaggtggtgcaGCAGCGC
GTGTGGACGCGTGTGTTGGAACACTTTGTGGTTTTCCCGATCGAGGCGGA
TATCCCCGTTGTgagccgccctcctcccctccctccctcccgccctcccc
ccctccttccctcccgccctcctctcctccccgcgcaTAGCCCCCCTTTT
CattcgtctcctcctcccgcatcccGATCGCCCTCCACTGATGTGCCGAC
actgcccgcctcctctcactCGCAGCACGTCTCAGGAAAAGGAACGCAGG
AGCAGGCTCCCGCTTtcattccccctccatgtccgccCTCGCGCGCCTCC
GCTGGTCCGAAACCCCTTACGGGCGTCAGCACCATCGTAGGTTTGCCTCT
ACCCAACGCAGGAAATTATCGCGGTACGTTGTGTAGCGCTGCAAGGCAAC
GATCCGCGCCTGCTGCTCTCGCAGATCCGTGGTGTCCTTTGCATCGCCTA
AACCGCCCTATTTGCCTCTTCGCCTCGCTCTTCGACTCGGCATCATGCCg
cgtccacccctctcctttccccctacctccccaccccccctctttcgtcC
GAGCGACCACCCAGGCGTAGGAAAGGCCATGGCAGAcccattccctcttt
ccctccctccctccctccctccctcctcccctagaACTCGGCCTTCCAGA
CGAGGTGTGCGAAACCGCCCTTTACCTGGTTGCCCGCGTGACCTGGTCGT
TGGCAGAGACCCTTGGAATGAggctcccccaccccctgcgCTTCCCTGCC
GGCAAGTCCTACGCCCTCATCGCTGAAGATGCACAGAGGCGGTaggggcc
aagggagggagggaggaagggagggagggaggaagaaaaagagggagaga
aacaGGCCCTCGGCGGCACCATGCGACCCATCCCTTCACCCTGTCCCGTT
ACCCGTCCCCCCttgtccaccgcctcctcgccactCCCAGCACCGAGTTC
GCCctcagcccctccttctaccacggcggcggcaggagCAATGCAACCTC
GACCGCGCCAGCCTATCGCCACCCCCcgagccggaggagaggcgcCGAGT
GCGCGGGCGCGGACGGCACGGACCCCTTCTccctgggcgtggaggccctc
CAGCTGAACGTGCACCAGCTAGCCGTCTCCCCAGCGGGTGTCGGGGTGGA
CGCGCGCGAGCTctggggaaaggaggcagtgcTTTTGAATTTATGGGCCG
TGCAACGCCGGGCAgcggaggtggtgaaagCTTACGAGGGCCTGCCCGAT
GTGCCCCTTCCGAGGgtggagcgggggaggatggaggggaaagcggaggg
tgggggggaaaagggggtgTCCGAGACAGCGGCTCTTGGATGCCCCAGGg
cccgaggggggaaagggaaaaccGCGGGTCGtgtttgtggaccgggagga
gtCAGAGTGGAGCCTGGTTGAGCTTCaagggtgggcggggggagggaagg
ggcgaccgggggcgggagggggaagagagagatgAAGGCTTGCAGTAGGG
TGATATGCGATGTAAATATGTGA back to topCoding sequence (CDS) from alignment at CM002468.1:360680..362752+ >rna6368 ID=rna6368|Name=rna6368|organism=Nannochloropsis gaditana|type=CDS|length=7398bp|location=Sequence derived from alignment at CM002468.1:360680..362752+ (Nannochloropsis gaditana) ATGGTGAATGAGTGCCCTCTATGCCGGGCGAGTGCCGCGGACGGGCTATC TTGCTCGGGATGTGTCAAGAACAATCTCTACTACAAGCAGCAGGCCATTG CCTACAAGAAAATGTCCCTACGCGACGCTTACGAGCAAGCCAAGTCGGTA CTGACTACGAACCAGCCAGTATTTCGAGAACAACAGGCACTGGCGGCGTT GATgaggagacaaggggagTTGAAAACTCGATTACAGGAGACGGCCGAAC GCGTTCGGGATTTGCGTTTAGCCGTGGCTCGAAAAACATTTGCGTTGGAG GAACGCCGGAAAGCCGTGGACGTAGCCAGGCAACgactggaggaggtgaa acGCTGGCAGGGTAGTCAATCGACGCCCGTGCAGCAGGGACTGCGGTGGT ATAAAGAGCAAacgatggaggtggtgcaGCAGCGCGTGTGGACGCGTGTG TTGGAACACTTTGTGGTTTTCCCGATCGAGGCGGATATCCCCGTTCACGT CTCAGGAAAAGGAACGCAGGAGCAGGCTCCCGCTTtcattccccctccat gtccgccCTCGCGCGCCTCCGCTGGTCCGAAACCCCTTACGGGCGTCAGC ACCATCGTAGGTTTGCCTCTACCCAACGCAGGAAATTATCGCGaACTCGG CCTTCCAGACGAGGTGTGCGAAACCGCCCTTTACCTGGTTGCCCGCGTGA CCTGGTCGTTGGCAGAGACCCTTGGAATGAggctcccccaccccctgcgC TTCCCTGCCGGCAAGTCCTACGCCCTCATCGCTGAAGATGCACAGAGGCG CACCGAGTTCGCCctcagcccctccttctaccacggcggcggcaggagCA ATGCAACCTCGACCGCGCCAGCCTATCGCCACCCCCcgagccggaggaga ggcgcCGAGTGCGCGGGCGCGGACGGCACGGACCCCTTCTccctgggcgt ggaggccctcCAGCTGAACGTGCACCAGCTAGCCGTCTCCCCAGCGGGTG TCGGGGTGGACGCGCGCGAGCTctggggaaaggaggcagtgcTTTTGAAT TTATGGGCCGTGCAACGCCGGGCAgcggaggtggtgaaagCTTACGAGGG CCTGCCCGATGTGCCCCTTCCGAGGgtggagcgggggaggatggagggga aagcggagggggcgaccgggggcgggagggggaagagagagatgAAGGCT TGCAGTAGGGTGATATGCGATGTAAATATGTGAATGGTGAATGAGTGCCC TCTATGCCGGGCGAGTGCCGCGGACGGGCTATCTTGCTCGGGATGTGTCA AGAACAATCTCTACTACAAGCAGCAGGCCATTGCCTACAAGAAAATGTCC CTACGCGACGCTTACGAGCAAGCCAAGTCGGTACTGACTACGAACCAGCC AGTATTTCGAGAACAACAGGCACTGGCGGCGTTGATgaggagacaagggg agTTGAAAACTCGATTACAGGAGACGGCCGAACGCGTTCGGGATTTGCGT TTAGCCGTGGCTCGAAAAACATTTGCGTTGGAGGAACGCCGGAAAGCCGT GGACGTAGCCAGGCAACgactggaggaggtgaaacGCTGGCAGGGTAGTC AATCGACGCCCGTGCAGCAGGGACTGCGGTGGTATAAAGAGCAAacgatg gaggtggtgcaGCAGCGCGTGTGGACGCGTGTGTTGGAACACTTTGTGGT TTTCCCGATCGAGGCGGATATCCCCGTTCACGTCTCAGGAAAAGGAACGC AGGAGCAGGCTCCCGCTTtcattccccctccatgtccgccCTCGCGCGCC TCCGCTGGTCCGAAACCCCTTACGGGCGTCAGCACCATCGTAGGTTTGCC TCTACCCAACGCAGGAAATTATCGCGaACTCGGCCTTCCAGACGAGGTGT GCGAAACCGCCCTTTACCTGGTTGCCCGCGTGACCTGGTCGTTGGCAGAG ACCCTTGGAATGAggctcccccaccccctgcgCTTCCCTGCCGGCAAGTC CTACGCCCTCATCGCTGAAGATGCACAGAGGCGCACCGAGTTCGCCctca gcccctccttctaccacggcggcggcaggagCAATGCAACCTCGACCGCG CCAGCCTATCGCCACCCCCcgagccggaggagaggcgcCGAGTGCGCGGG CGCGGACGGCACGGACCCCTTCTccctgggcgtggaggccctcCAGCTGA ACGTGCACCAGCTAGCCGTCTCCCCAGCGGGTGTCGGGGTGGACGCGCGC GAGCTctggggaaaggaggcagtgcTTTTGAATTTATGGGCCGTGCAACG CCGGGCAgcggaggtggtgaaagCTTACGAGGGCCTGCCCGATGTGCCCC TTCCGAGGgtggagcgggggaggatggaggggaaagcggagggggcgacc gggggcgggagggggaagagagagatgAAGGCTTGCAGTAGGGTGATATG CGATGTAAATATGTGAATGGTGAATGAGTGCCCTCTATGCCGGGCGAGTG CCGCGGACGGGCTATCTTGCTCGGGATGTGTCAAGAACAATCTCTACTAC AAGCAGCAGGCCATTGCCTACAAGAAAATGTCCCTACGCGACGCTTACGA GCAAGCCAAGTCGGTACTGACTACGAACCAGCCAGTATTTCGAGAACAAC AGGCACTGGCGGCGTTGATgaggagacaaggggagTTGAAAACTCGATTA CAGGAGACGGCCGAACGCGTTCGGGATTTGCGTTTAGCCGTGGCTCGAAA AACATTTGCGTTGGAGGAACGCCGGAAAGCCGTGGACGTAGCCAGGCAAC gactggaggaggtgaaacGCTGGCAGGGTAGTCAATCGACGCCCGTGCAG CAGGGACTGCGGTGGTATAAAGAGCAAacgatggaggtggtgcaGCAGCG CGTGTGGACGCGTGTGTTGGAACACTTTGTGGTTTTCCCGATCGAGGCGG ATATCCCCGTTCACGTCTCAGGAAAAGGAACGCAGGAGCAGGCTCCCGCT TtcattccccctccatgtccgccCTCGCGCGCCTCCGCTGGTCCGAAACC CCTTACGGGCGTCAGCACCATCGTAGGTTTGCCTCTACCCAACGCAGGAA ATTATCGCGaACTCGGCCTTCCAGACGAGGTGTGCGAAACCGCCCTTTAC CTGGTTGCCCGCGTGACCTGGTCGTTGGCAGAGACCCTTGGAATGAggct cccccaccccctgcgCTTCCCTGCCGGCAAGTCCTACGCCCTCATCGCTG AAGATGCACAGAGGCGCACCGAGTTCGCCctcagcccctccttctaccac ggcggcggcaggagCAATGCAACCTCGACCGCGCCAGCCTATCGCCACCC CCcgagccggaggagaggcgcCGAGTGCGCGGGCGCGGACGGCACGGACC CCTTCTccctgggcgtggaggccctcCAGCTGAACGTGCACCAGCTAGCC GTCTCCCCAGCGGGTGTCGGGGTGGACGCGCGCGAGCTctggggaaagga ggcagtgcTTTTGAATTTATGGGCCGTGCAACGCCGGGCAgcggaggtgg tgaaagCTTACGAGGGCCTGCCCGATGTGCCCCTTCCGAGGgtggagcgg gggaggatggaggggaaagcggagggggcgaccgggggcgggagggggaa gagagagatgAAGGCTTGCAGTAGGGTGATATGCGATGTAAATATGTGAA TGGTGAATGAGTGCCCTCTATGCCGGGCGAGTGCCGCGGACGGGCTATCT TGCTCGGGATGTGTCAAGAACAATCTCTACTACAAGCAGCAGGCCATTGC CTACAAGAAAATGTCCCTACGCGACGCTTACGAGCAAGCCAAGTCGGTAC TGACTACGAACCAGCCAGTATTTCGAGAACAACAGGCACTGGCGGCGTTG ATgaggagacaaggggagTTGAAAACTCGATTACAGGAGACGGCCGAACG CGTTCGGGATTTGCGTTTAGCCGTGGCTCGAAAAACATTTGCGTTGGAGG AACGCCGGAAAGCCGTGGACGTAGCCAGGCAACgactggaggaggtgaaa cGCTGGCAGGGTAGTCAATCGACGCCCGTGCAGCAGGGACTGCGGTGGTA TAAAGAGCAAacgatggaggtggtgcaGCAGCGCGTGTGGACGCGTGTGT TGGAACACTTTGTGGTTTTCCCGATCGAGGCGGATATCCCCGTTCACGTC TCAGGAAAAGGAACGCAGGAGCAGGCTCCCGCTTtcattccccctccatg tccgccCTCGCGCGCCTCCGCTGGTCCGAAACCCCTTACGGGCGTCAGCA CCATCGTAGGTTTGCCTCTACCCAACGCAGGAAATTATCGCGaACTCGGC CTTCCAGACGAGGTGTGCGAAACCGCCCTTTACCTGGTTGCCCGCGTGAC CTGGTCGTTGGCAGAGACCCTTGGAATGAggctcccccaccccctgcgCT TCCCTGCCGGCAAGTCCTACGCCCTCATCGCTGAAGATGCACAGAGGCGC ACCGAGTTCGCCctcagcccctccttctaccacggcggcggcaggagCAA TGCAACCTCGACCGCGCCAGCCTATCGCCACCCCCcgagccggaggagag gcgcCGAGTGCGCGGGCGCGGACGGCACGGACCCCTTCTccctgggcgtg gaggccctcCAGCTGAACGTGCACCAGCTAGCCGTCTCCCCAGCGGGTGT CGGGGTGGACGCGCGCGAGCTctggggaaaggaggcagtgcTTTTGAATT TATGGGCCGTGCAACGCCGGGCAgcggaggtggtgaaagCTTACGAGGGC CTGCCCGATGTGCCCCTTCCGAGGgtggagcgggggaggatggaggggaa agcggagggggcgaccgggggcgggagggggaagagagagatgAAGGCTT GCAGTAGGGTGATATGCGATGTAAATATGTGAATGGTGAATGAGTGCCCT CTATGCCGGGCGAGTGCCGCGGACGGGCTATCTTGCTCGGGATGTGTCAA GAACAATCTCTACTACAAGCAGCAGGCCATTGCCTACAAGAAAATGTCCC TACGCGACGCTTACGAGCAAGCCAAGTCGGTACTGACTACGAACCAGCCA GTATTTCGAGAACAACAGGCACTGGCGGCGTTGATgaggagacaagggga gTTGAAAACTCGATTACAGGAGACGGCCGAACGCGTTCGGGATTTGCGTT TAGCCGTGGCTCGAAAAACATTTGCGTTGGAGGAACGCCGGAAAGCCGTG GACGTAGCCAGGCAACgactggaggaggtgaaacGCTGGCAGGGTAGTCA ATCGACGCCCGTGCAGCAGGGACTGCGGTGGTATAAAGAGCAAacgatgg aggtggtgcaGCAGCGCGTGTGGACGCGTGTGTTGGAACACTTTGTGGTT TTCCCGATCGAGGCGGATATCCCCGTTCACGTCTCAGGAAAAGGAACGCA GGAGCAGGCTCCCGCTTtcattccccctccatgtccgccCTCGCGCGCCT CCGCTGGTCCGAAACCCCTTACGGGCGTCAGCACCATCGTAGGTTTGCCT CTACCCAACGCAGGAAATTATCGCGaACTCGGCCTTCCAGACGAGGTGTG CGAAACCGCCCTTTACCTGGTTGCCCGCGTGACCTGGTCGTTGGCAGAGA CCCTTGGAATGAggctcccccaccccctgcgCTTCCCTGCCGGCAAGTCC TACGCCCTCATCGCTGAAGATGCACAGAGGCGCACCGAGTTCGCCctcag cccctccttctaccacggcggcggcaggagCAATGCAACCTCGACCGCGC CAGCCTATCGCCACCCCCcgagccggaggagaggcgcCGAGTGCGCGGGC GCGGACGGCACGGACCCCTTCTccctgggcgtggaggccctcCAGCTGAA CGTGCACCAGCTAGCCGTCTCCCCAGCGGGTGTCGGGGTGGACGCGCGCG AGCTctggggaaaggaggcagtgcTTTTGAATTTATGGGCCGTGCAACGC CGGGCAgcggaggtggtgaaagCTTACGAGGGCCTGCCCGATGTGCCCCT TCCGAGGgtggagcgggggaggatggaggggaaagcggagggggcgaccg ggggcgggagggggaagagagagatgAAGGCTTGCAGTAGGGTGATATGC GATGTAAATATGTGAATGGTGAATGAGTGCCCTCTATGCCGGGCGAGTGC CGCGGACGGGCTATCTTGCTCGGGATGTGTCAAGAACAATCTCTACTACA AGCAGCAGGCCATTGCCTACAAGAAAATGTCCCTACGCGACGCTTACGAG CAAGCCAAGTCGGTACTGACTACGAACCAGCCAGTATTTCGAGAACAACA GGCACTGGCGGCGTTGATgaggagacaaggggagTTGAAAACTCGATTAC AGGAGACGGCCGAACGCGTTCGGGATTTGCGTTTAGCCGTGGCTCGAAAA ACATTTGCGTTGGAGGAACGCCGGAAAGCCGTGGACGTAGCCAGGCAACg actggaggaggtgaaacGCTGGCAGGGTAGTCAATCGACGCCCGTGCAGC AGGGACTGCGGTGGTATAAAGAGCAAacgatggaggtggtgcaGCAGCGC GTGTGGACGCGTGTGTTGGAACACTTTGTGGTTTTCCCGATCGAGGCGGA TATCCCCGTTCACGTCTCAGGAAAAGGAACGCAGGAGCAGGCTCCCGCTT tcattccccctccatgtccgccCTCGCGCGCCTCCGCTGGTCCGAAACCC CTTACGGGCGTCAGCACCATCGTAGGTTTGCCTCTACCCAACGCAGGAAA TTATCGCGaACTCGGCCTTCCAGACGAGGTGTGCGAAACCGCCCTTTACC TGGTTGCCCGCGTGACCTGGTCGTTGGCAGAGACCCTTGGAATGAggctc ccccaccccctgcgCTTCCCTGCCGGCAAGTCCTACGCCCTCATCGCTGA AGATGCACAGAGGCGCACCGAGTTCGCCctcagcccctccttctaccacg gcggcggcaggagCAATGCAACCTCGACCGCGCCAGCCTATCGCCACCCC CcgagccggaggagaggcgcCGAGTGCGCGGGCGCGGACGGCACGGACCC CTTCTccctgggcgtggaggccctcCAGCTGAACGTGCACCAGCTAGCCG TCTCCCCAGCGGGTGTCGGGGTGGACGCGCGCGAGCTctggggaaaggag gcagtgcTTTTGAATTTATGGGCCGTGCAACGCCGGGCAgcggaggtggt gaaagCTTACGAGGGCCTGCCCGATGTGCCCCTTCCGAGGgtggagcggg ggaggatggaggggaaagcggagggggcgaccgggggcgggagggggaag agagagatgAAGGCTTGCAGTAGGGTGATATGCGATGTAAATATGTGA back to top
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