EWM24346.1, cds6333 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24346.1 vs. NCBI_GenBank
Match: gi|585105740|gb|EWM24346.1| (ankyrin repeat domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1269.6 bits (3284), Expect = 0.000e+0 Identity = 626/626 (100.00%), Postives = 626/626 (100.00%), Query Frame = 0 Query: 1 MQAHTYTTISINLRQENMKKITSFASPRRLGGKADEAAREEALSSTPNSESALDLTADIKEILIAGARTSQATKNSPRNGLDGQNNNISSSPRKIPAAFTSLAPPLSPESPREKRGLLDFSALSSLSPGRKKVAGLGCIRNTTSPLRAGSAPAGAGFVSQPTSPISSSPSSPSYKFPLSSRSPARGSSGSLRLHSLRNLTGTPPNTARSPKPADGLWGLLGYTSPLDSAVHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQSKGGEIERCLQEAQQHARALTEGGALHSHDSQEVSKKKGSGITCVWECMARLCGEAVEDAGDGEEDDIPQPVEHQLLCVFRASSIPPDASEVYLDNLRRHGYDNLMALRAIASERFKLSLGKYVPDRQDRKRLIKALNAMIDTVDESGKIPEPPLHLPVGEYLKHLLSVSDDLAMRYAEGLRGMNVHTGAQLGTASYDEVEMNLGSTLLQGHKKALKIWLRLRAADREGSGRGEMKSP 626 MQAHTYTTISINLRQENMKKITSFASPRRLGGKADEAAREEALSSTPNSESALDLTADIKEILIAGARTSQATKNSPRNGLDGQNNNISSSPRKIPAAFTSLAPPLSPESPREKRGLLDFSALSSLSPGRKKVAGLGCIRNTTSPLRAGSAPAGAGFVSQPTSPISSSPSSPSYKFPLSSRSPARGSSGSLRLHSLRNLTGTPPNTARSPKPADGLWGLLGYTSPLDSAVHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQSKGGEIERCLQEAQQHARALTEGGALHSHDSQEVSKKKGSGITCVWECMARLCGEAVEDAGDGEEDDIPQPVEHQLLCVFRASSIPPDASEVYLDNLRRHGYDNLMALRAIASERFKLSLGKYVPDRQDRKRLIKALNAMIDTVDESGKIPEPPLHLPVGEYLKHLLSVSDDLAMRYAEGLRGMNVHTGAQLGTASYDEVEMNLGSTLLQGHKKALKIWLRLRAADREGSGRGEMKSP Sbjct: 1 MQAHTYTTISINLRQENMKKITSFASPRRLGGKADEAAREEALSSTPNSESALDLTADIKEILIAGARTSQATKNSPRNGLDGQNNNISSSPRKIPAAFTSLAPPLSPESPREKRGLLDFSALSSLSPGRKKVAGLGCIRNTTSPLRAGSAPAGAGFVSQPTSPISSSPSSPSYKFPLSSRSPARGSSGSLRLHSLRNLTGTPPNTARSPKPADGLWGLLGYTSPLDSAVHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQSKGGEIERCLQEAQQHARALTEGGALHSHDSQEVSKKKGSGITCVWECMARLCGEAVEDAGDGEEDDIPQPVEHQLLCVFRASSIPPDASEVYLDNLRRHGYDNLMALRAIASERFKLSLGKYVPDRQDRKRLIKALNAMIDTVDESGKIPEPPLHLPVGEYLKHLLSVSDDLAMRYAEGLRGMNVHTGAQLGTASYDEVEMNLGSTLLQGHKKALKIWLRLRAADREGSGRGEMKSP 626
BLAST of EWM24346.1 vs. NCBI_GenBank
Match: gi|553192487|ref|XP_005855580.1| (putative dna binding component of sbf [Nannochloropsis gaditana CCMP526] >gi|422293472|gb|EKU20772.1| putative dna binding component of sbf [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 739.184 bits (1907), Expect = 0.000e+0 Identity = 359/362 (99.17%), Postives = 359/362 (99.17%), Query Frame = 0 Query: 265 MLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQSKGGEIERCLQEAQQHARALTEGGALHSHDSQEVSKKKGSGITCVWECMARLCGEAVEDAGDGEEDDIPQPVEHQLLCVFRASSIPPDASEVYLDNLRRHGYDNLMALRAIASERFKLSLGKYVPDRQDRKRLIKALNAMIDTVDESGKIPEPPLHLPVGEYLKHLLSVSDDLAMRYAEGLRGMNVHTGAQLGTASYDEVEMNLGSTLLQGHKKALKIWLRLRAADREGSGRGEMKSP 626 MLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAP VALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPL VDKEGLDPLQLLLQEKSRSVSVQSKGGEIERCLQEAQQHARALTEGG LHSHDSQEVSKKKGSGITCVWECMARLCGEAVEDAGDGEEDDIPQPVEHQLLCVFRASSIPPDASEVYLDNLRRHGYDNLMALRAIASERFKLSLGKYVPDRQDRKRLIKALNAMIDTVDESGKIPEPPLHLPVGEYLKHLLSVSDDLAMRYAEGLRGMNVHTGAQLGTASYDEVEMNLGSTLLQGHKKALKIWLRLRAADREGSGRGEMKSP Sbjct: 1 MLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAPGVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLVVDKEGLDPLQLLLQEKSRSVSVQSKGGEIERCLQEAQQHARALTEGGTLHSHDSQEVSKKKGSGITCVWECMARLCGEAVEDAGDGEEDDIPQPVEHQLLCVFRASSIPPDASEVYLDNLRRHGYDNLMALRAIASERFKLSLGKYVPDRQDRKRLIKALNAMIDTVDESGKIPEPPLHLPVGEYLKHLLSVSDDLAMRYAEGLRGMNVHTGAQLGTASYDEVEMNLGSTLLQGHKKALKIWLRLRAADREGSGRGEMKSP 362
BLAST of EWM24346.1 vs. NCBI_GenBank
Match: gi|1040916490|ref|XP_017220499.1| (PREDICTED: ankyrin-1 [Daucus carota subsp. sativus] >gi|1021026431|gb|KZM84218.1| hypothetical protein DCAR_028235 [Daucus carota subsp. sativus]) HSP 1 Score: 76.6406 bits (187), Expect = 5.756e-12 Identity = 57/163 (34.97%), Postives = 81/163 (49.69%), Query Frame = 0 Query: 227 DSAVHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQS 389 +S VH AAR GDL +Q + + NP V++ + TPL LAA AGQ + V YL +ADV A A+H A+ L G+ + + G TA+HYAA +L+++++L+ KGAN A K G P L E+ RS V+S Sbjct: 8 NSDVHAAARAGDLSGVQLICSTNPLAVNSRDKHSRTPLHLAAWAGQAQVVSYLCE---NKADVGAAAMDDMGAIHFAAQKGHLKVVQILISSGVSTKSANRK--------GMTALHYAAQGSSLELVKYLVKKGANLNAKTKAGKTPFDLASSEEIRSFLVES 159
BLAST of EWM24346.1 vs. NCBI_GenBank
Match: gi|1026020902|ref|XP_016550233.1| (PREDICTED: receptor-interacting serine/threonine-protein kinase 4 isoform X1 [Capsicum annuum]) HSP 1 Score: 75.8702 bits (185), Expect = 1.003e-11 Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 0 Query: 230 VHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARG---------TSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSV 385 +H AAR GDL +QTL T NP V++ + TPL LAA +G + V YL++ +ADV A A+H A+ S SV C + +G TA+HYAA +L+++++LL KGANP A +K G + L E+ S+ Sbjct: 16 LHVAARNGDLNAVQTLCTTNPLSVNSRDKHSRTPLHLAAWSGHAQIVDYLVK---NKADVGAAAMDDMGAIHFAAQKGHLEVVRLLVSSGVSVKSC-----------------NRKGMTALHYAAQGSHLELVKYLLKKGANPNAKNKAGKTSIDLASDEEVSSI 160
BLAST of EWM24346.1 vs. NCBI_GenBank
Match: gi|808847744|gb|KKF08773.1| (Rho guanine nucleotide exchange factor 16 [Larimichthys crocea]) HSP 1 Score: 79.7221 bits (195), Expect = 1.187e-11 Identity = 55/146 (37.67%), Postives = 81/146 (55.48%), Query Frame = 0 Query: 230 VHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQ 375 VH AA +GDLP L+ LL +P +V++ + ATPL LA GQ E V+YL++ + A DG T LH A+ + +V + L+ + G L D +G TA+H+AASRG+ +VL +LL G + + +D G PL Sbjct: 144 VHYAAAKGDLPSLRLLLGHSPNVVNSQTKNGATPLYLACQEGQLEVVQYLVKDCGADPSIRANDGM--TPLHAAAQMGHN--TVIVWLISFTEIG-----LTDRDSDGATAMHFAASRGHAKVLSWLLLHGGD-IVMDTWGGTPLH 279
BLAST of EWM24346.1 vs. NCBI_GenBank
Match: gi|1109019732|ref|XP_019112188.1| (PREDICTED: espin [Larimichthys crocea]) HSP 1 Score: 78.9518 bits (193), Expect = 1.373e-11 Identity = 59/168 (35.12%), Postives = 88/168 (52.38%), Query Frame = 0 Query: 230 VHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQSKGGEIERC 397 VH AA +GDLP L+ LL +P +V++ + ATPL LA GQ E V+YL++ + A DG T LH A+ + +V + L+ + G L D +G TA+H+AASRG+ +VL +LL G + + +D G PL ++ GE+E C Sbjct: 144 VHYAAAKGDLPSLRLLLGHSPNVVNSQTKNGATPLYLACQEGQLEVVQYLVKDCGADPSIRANDGM--TPLHAAAQMGHN--TVIVWLISFTEIG-----LTDRDSDGATAMHFAASRGHAKVLSWLLLHGGD-IVMDTWGGTPLH-----------DAAENGELECC 290
BLAST of EWM24346.1 vs. NCBI_GenBank
Match: gi|1191004797|ref|XP_020874541.1| (ankyrin repeat domain-containing protein 29 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 74.7146 bits (182), Expect = 2.124e-11 Identity = 56/177 (31.64%), Postives = 87/177 (49.15%), Query Frame = 0 Query: 230 VHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQSKGGEIERCLQEAQQHAR 406 +H AAR GDL +Q++L+ NP V++ + TPL LAA AG E V YL + +ADV A G A+H ++ V LL GG + + +G T +HYAA + +++++L+ KGAN A K G +P + + E + L+E ++ AR Sbjct: 17 LHSAARSGDLAAVQSILSSNPLAVNSRDKHSRTPLHLAAWAGHNEVVSYLCK---NKADVGAAAGDDMGAIHFASQ--KGHLEVVRTLLSA---GGSVKSITR---KGLTPLHYAAQGSHFEIVKYLVKKGANVRATTKAGKNPADV------------AGNAETQNFLEECEEQAR 170
BLAST of EWM24346.1 vs. NCBI_GenBank
Match: gi|1117526214|ref|XP_019445221.1| (PREDICTED: uncharacterized protein LOC109349041 [Lupinus angustifolius] >gi|1102711949|gb|OIW10724.1| hypothetical protein TanjilG_27670 [Lupinus angustifolius]) HSP 1 Score: 74.7146 bits (182), Expect = 2.831e-11 Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 0 Query: 230 VHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLA-RGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSV 385 +H AAR GDL + ++LT NP V++ + TPL LAA +GQ E V YL + RADV A+ TA+H A +G + V + + R +G T++HYAA +L+++++L KGA+ A K G PL L ++ RS Sbjct: 15 LHAAARSGDLIAVHSILTSNPLAVNSRDKHSRTPLHLAAFSGQTEVVSYLCK---NRADVGASAMDDMTAIHFAAQKGHLEVFRVLVSAGASFKASTR---------KGMTSLHYAAQGSHLELVKYLAKKGASLKAKTKAGKTPLDLATNQEVRSF 159
BLAST of EWM24346.1 vs. NCBI_GenBank
Match: gi|661881381|emb|CDP14954.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 74.3294 bits (181), Expect = 4.038e-11 Identity = 53/165 (32.12%), Postives = 86/165 (52.12%), Query Frame = 0 Query: 227 DSAVHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLA-RGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQSK 390 D +H AAR GDL +Q + + NP +++ + TPL LAA +GQ + V YL + +ADV A A+H A +G ++ + G P + + +G TA+HYAA +L+++++L+ KGA A +K G P+ L E+ R+ VQ + Sbjct: 20 DEELHGAARSGDLEAVQRICSTNPLAINSRDKHSRTPLHLAAWSGQTKVVEYLCK----KADVGAAAMDDMGAIHFAAQKGHTEVVRILF-------NSGVP--IKSHNRKGMTALHYAAQGSHLELVKYLIKKGATIDAKNKAGKTPVDLAGSEEIRAFLVQCQ 171
BLAST of EWM24346.1 vs. NCBI_GenBank
Match: gi|1024005759|gb|KZV31721.1| (ankyrin-3 [Dorcoceras hygrometricum]) HSP 1 Score: 73.9442 bits (180), Expect = 4.550e-11 Identity = 53/166 (31.93%), Postives = 86/166 (51.81%), Query Frame = 0 Query: 227 DSAVHEAARQGDLPLLQTLLTQNPTLVSTPGNDNATPLMLAAGAGQEETVRYLLRALSGRADVWATDGARRTALHHLARGTSDAPSVALCLLGLDQEGGRPQHLDWEDVEGRTAVHYAASRGNLQVLRFLLGKGANPLAVDKEGLDPLQLLLQEKSRSVSVQSKGG 392 D +H AAR GD+ +Q L + NP V++ + TPL LAA +G +E V YL + +AD+ A A+H A+ L ++ + G + + +G TA+HYAA +L+++++L+ KGAN A +K G + L E+ R+ V+ K G Sbjct: 14 DEKLHAAARSGDMKAVQELCSANPLAVNSRDRHSRTPLHLAAWSGHDEVVNYLCK---NKADIGAAAVDDMGAIHFAAQKGH------LQVIKILHASGIS--IKSYNRKGMTALHYAAQGSHLELVKYLVKKGANLDAKNKAGKTAVDLATSEEVRAFLVEWKNG 168 The following BLAST results are available for this feature:
BLAST of EWM24346.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|