EWM24385.1, cds6287 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24385.1 vs. NCBI_GenBank
Match: gi|585105785|gb|EWM24385.1| (peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana]) HSP 1 Score: 804.283 bits (2076), Expect = 0.000e+0 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0 Query: 1 MLCSRTGTGSRRGAGTWIRTATMRRLRTVIPRKAHAKGHPSRTLGHGVQLENSARSSAASVFGVPFTPVLSISSIPLGGAFSRPRSNSNSSSSSSSSSDSSSSDDSSHSSSSNSSRNLARRHHSTKTSAHAQAVEEEGGDGREGGKNIEKGRPGTRSGVRPKGTPFRPSRGDNGRGWYELYKEAGPEGFKRYRPPTPFDWSPPSTATPPSEAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVMEAE 405 MLCSRTGTGSRRGAGTWIRTATMRRLRTVIPRKAHAKGHPSRTLGHGVQLENSARSSAASVFGVPFTPVLSISSIPLGGAFSRPRSNSNSSSSSSSSSDSSSSDDSSHSSSSNSSRNLARRHHSTKTSAHAQAVEEEGGDGREGGKNIEKGRPGTRSGVRPKGTPFRPSRGDNGRGWYELYKEAGPEGFKRYRPPTPFDWSPPSTATPPSEAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVMEAE Sbjct: 1 MLCSRTGTGSRRGAGTWIRTATMRRLRTVIPRKAHAKGHPSRTLGHGVQLENSARSSAASVFGVPFTPVLSISSIPLGGAFSRPRSNSNSSSSSSSSSDSSSSDDSSHSSSSNSSRNLARRHHSTKTSAHAQAVEEEGGDGREGGKNIEKGRPGTRSGVRPKGTPFRPSRGDNGRGWYELYKEAGPEGFKRYRPPTPFDWSPPSTATPPSEAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVMEAE 405
BLAST of EWM24385.1 vs. NCBI_GenBank
Match: gi|585105786|gb|EWM24386.1| (peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana]) HSP 1 Score: 495.352 bits (1274), Expect = 5.020e-174 Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 0 Query: 161 PKGTPFRPSRGDNGRGWYELYKEAGPEGFKRYRPPTPFDWSPPSTATPPSEAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVMEAE 405 P GTPFRPSRGDNGRGWYELYKEAGPEGFKRYRPPTPFDWSPPSTATPPSEAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVMEAE Sbjct: 24 PPGTPFRPSRGDNGRGWYELYKEAGPEGFKRYRPPTPFDWSPPSTATPPSEAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVMEAE 268
BLAST of EWM24385.1 vs. NCBI_GenBank
Match: gi|298712262|emb|CBJ26713.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 193.741 bits (491), Expect = 1.566e-55 Identity = 112/277 (40.43%), Postives = 147/277 (53.07%), Query Frame = 0 Query: 169 SRGDNGRGWYELYKEAGPEGFKRYRPPTPFDW-SPPSTATPPSEAPRRSK-----------VFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAG-----------REGGREGG---------------------KTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGL-GPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAG 400 +R GRGWY+ Y+ GP+ F++ R P PFDW +P + P + A R + F +S+D P GR+ ELA D+LP+ +ENF LC G R + GG + LGY GS IHRVV G GI+GGD+ + GG +HS G RFFPDE+F IPHT PGLL+M ++G H NGS F+I+T A HLDGRSV FGRV G+EV+ AV Y+IRG+PV+ + +EE G Sbjct: 21 TRASTGRGWYQRYQRMGPDAFRKARAPNPFDWDTPLAPPAPEAGAEERQQGGSGRRRPRRRAFFAMSVDGVPAGRVEFELASDLLPVTSENFLRLCNGVTVASAAGEATLLRRQEQAGGGAAVEEEAVEEKEEEEEKEEEEEELGYKGSVIHRVVTGTGIMGGDV---------------EGYGGKRSHSAFSGMRFFPDEAFLIPHTAPGLLTMANSGLHTNGSQFYITTEAAGHLDGRSVAFGRVTKGLEVVRAVYGMYSIRGKPVSEITIEECG 282
BLAST of EWM24385.1 vs. NCBI_GenBank
Match: gi|169867062|ref|XP_001840112.1| (peptidyl-prolyl cis-trans isomerase B [Coprinopsis cinerea okayama7#130] >gi|116498664|gb|EAU81559.1| peptidyl-prolyl cis-trans isomerase B [Coprinopsis cinerea okayama7#130]) HSP 1 Score: 142.51 bits (358), Expect = 2.650e-35 Identity = 82/203 (40.39%), Postives = 113/203 (55.67%), Query Frame = 0 Query: 204 STATPPSEAPR---RSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVME 403 +T T P+ APR R+ V+ I+++ EP GRIV +L DD++P A+NFR L G + G GYAGS HR++ I GGD + G G S GPRF PDE+F + H+ PGLLSM +AG + NGS F I+T P LDGR VFG VV G+E+++ + + + GRP V + E GV++ Sbjct: 167 ATETAPAPAPRDLSRANVYFNIAINNEPKGRIVFKLFDDLVPKTAKNFRELATG----------EHGFGYAGSGFHRIIPNFMIQGGDFT---------------NHNGTGGKSIYGPRF-PDENFALKHSKPGLLSMANAGPNTNGSQFFITTVVTPWLDGRHTVFGEVVEGMELVKEIESVGSGSGRPSKKVTISECGVLD 343
BLAST of EWM24385.1 vs. NCBI_GenBank
Match: gi|761931552|gb|KIY52500.1| (hypothetical protein FISHEDRAFT_55992 [Fistulina hepatica ATCC 64428]) HSP 1 Score: 136.346 bits (342), Expect = 5.251e-35 Identity = 79/188 (42.02%), Postives = 106/188 (56.38%), Query Frame = 0 Query: 216 SKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVME 403 S VF ++++ P GRIV +L DD++P A NFR LC G + G GYAGS HRV+ + GGD + R G G S G +F PDE+F+IPH+ PGLLSM +AGA+ NGS F I+T L+GR VVFG VV G++V++A+ N T GRP + V V G ++ Sbjct: 9 SNVFFEVAINSNPAGRIVFKLYDDVVPRTARNFRELCTG----------QHGFGYAGSTFHRVIPQFMLQGGDFT---------------RHNGTGGKSIYGEKF-PDENFEIPHSKPGLLSMANAGANTNGSQFFITTVVTSWLNGRHVVFGEVVEGMDVVKAIENEGTPGGRPNSKVTVTSCGEVQ 170
BLAST of EWM24385.1 vs. NCBI_GenBank
Match: gi|303321646|ref|XP_003070817.1| (peptidyl-prolyl cis-trans isomerase H, putative [Coccidioides posadasii C735 delta SOWgp] >gi|240110514|gb|EER28672.1| peptidyl-prolyl cis-trans isomerase H, putative [Coccidioides posadasii C735 delta SOWgp] >gi|320040300|gb|EFW22233.1| peptidyl-prolyl cis-trans isomerase [Coccidioides posadasii str. Silveira] >gi|855528692|gb|KMM64227.1| peptidyl-prolyl cis-trans isomerase H [Coccidioides posadasii RMSCC 3488]) HSP 1 Score: 136.732 bits (343), Expect = 6.836e-35 Identity = 81/200 (40.50%), Postives = 106/200 (53.00%), Query Frame = 0 Query: 204 STATPPSEAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREG-GREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVM 402 +TATPP P VF +SL EPLGRI +EL ++ P AENFR C G ++ GR G Y GS+ HRV+K I GGD G G G FPDE+F + H PGLLSM ++G + NG F I+T A P L+ + VVFGRV+ G+E+++ V NT T R +P V + + G M Sbjct: 5 ATATPPQNGPN-PIVFFDLSLGGEPLGRIKMELFANVTPRTAENFRQFCTGESKDARGRPQG-----YKGSKFHRVIKDFMIQGGDFLNG---------------DGTGRICIYGTATFPDENFNLTHDRPGLLSMANSGPNTNGCQFFITTVATPFLNNKHVVFGRVIEGMEIVKMVENTRTTRDKPNQDVVIAQCGEM 183
BLAST of EWM24385.1 vs. NCBI_GenBank
Match: gi|661185652|emb|CDH52296.1| (cpr1p [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 135.961 bits (341), Expect = 8.443e-35 Identity = 74/186 (39.78%), Postives = 104/186 (55.91%), Query Frame = 0 Query: 217 KVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVM 402 KV+ +S+DK+PLGRI + L +D++P A+NFR LC G + G GY GS HRV+ + GGD + G G S G +F PDE+FQ+ HT PG LSM +AG + NGS F I+T CP LDG+ VVFG VV G+ V+ + + G+P ++VE++G + Sbjct: 5 KVYFDVSVDKQPLGRITMVLFNDVVPNTADNFRALCTG----------EKGFGYQGSIFHRVIPQFMLQGGDFTNFN---------------GTGGKSIYGEKF-PDENFQLKHTKPGQLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGMNVVSEIEKLGSASGKPKKEIKVEKSGQL 164
BLAST of EWM24385.1 vs. NCBI_GenBank
Match: gi|954192867|gb|KRX05618.1| (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain [Pseudocohnilembus persalinus]) HSP 1 Score: 136.346 bits (342), Expect = 1.022e-34 Identity = 77/187 (41.18%), Postives = 104/187 (55.61%), Query Frame = 0 Query: 214 RRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAG 400 + KVF +++ +P GRIV EL D++P AENFR LC G G++ G L Y GS HR++ + GGD + Q G G +S G R FPDE+F + H PGLLSM + G + NGS F I+T CP LDG+ VFG+VV G+EVL AV + T G P + V +++ G Sbjct: 15 KNPKVFFDVAIGSQPKGRIVFELFSDVVPKTAENFRSLCVG-----GQKAGNYDLHYKGSPFHRIIPSFMVQGGDFTN---------------QNGTGGYSIYG-REFPDENFNVKHDRPGLLSMANRGPNTNGSQFFITTVECPWLDGKHTVFGKVVEGMEVLNAVESQGTRSGTPKSKVTIQDCG 180
BLAST of EWM24385.1 vs. NCBI_GenBank
Match: gi|752280037|dbj|GAM85333.1| (hypothetical protein ANO11243_033400 [fungal sp. No.11243]) HSP 1 Score: 136.346 bits (342), Expect = 1.126e-34 Identity = 87/210 (41.43%), Postives = 108/210 (51.43%), Query Frame = 0 Query: 202 PPSTATPPS-EAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVV------GGVEVLEAVANTYTIRG--RPVAVVRVEEAGVM 402 PPS P +P VF ISL EPLGRI +EL D++P AENFR LC G E GR +GY GSR+HRV+ G I GGD G G+ G R F DE+F++ H GPGLLSM ++G NG F I+T A PHLDG+ VVFGRV+ ++V+ + N + RPV V V G M Sbjct: 7 PPSAPLHPDLTSPTNPVVFFDISLANEPLGRIKMELFADVVPRTAENFRQLCTGEYVERGR-----AVGYKGSRVHRVIPGFMIQGGDFING---------------DGTGSTCIYGTRKFADENFRVRHNGPGLLSMANSGPDTNGCQFFITTAATPHLDGKHVVFGRVLPDDKNSKSMDVVRKIENVRVTKNNDRPVMDVTVALCGEM 196
BLAST of EWM24385.1 vs. NCBI_GenBank
Match: gi|119195811|ref|XP_001248509.1| (peptidyl-prolyl cis-trans isomerase H [Coccidioides immitis RS] >gi|767014492|gb|EAS36926.3| peptidyl-prolyl cis-trans isomerase H [Coccidioides immitis RS] >gi|859416995|gb|KMP09837.1| peptidyl-prolyl cis-trans isomerase [Coccidioides immitis RMSCC 2394] >gi|875287645|gb|KMU81274.1| peptidyl-prolyl cis-trans isomerase H [Coccidioides immitis RMSCC 3703] >gi|875646669|gb|KMU89357.1| peptidyl-prolyl cis-trans isomerase [Coccidioides immitis H538.4]) HSP 1 Score: 135.961 bits (341), Expect = 1.257e-34 Identity = 80/200 (40.00%), Postives = 106/200 (53.00%), Query Frame = 0 Query: 204 STATPPSEAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRLLCQGAGREG-GREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGAIRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVFHISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAGVM 402 +TATPP P VF +SL EPLGR+ +EL ++ P AENFR C G ++ GR G Y GS+ HRV+K I GGD G G G FPDE+F + H PGLLSM ++G + NG F I+T A P L+ + VVFGRV+ G+E+++ V NT T R +P V + + G M Sbjct: 5 ATATPPQNGPN-PIVFFDLSLGGEPLGRVKMELFANVTPRTAENFRQFCTGESKDARGRPQG-----YKGSKFHRVIKDFMIQGGDFLNG---------------DGTGRICIYGTATFPDENFNLTHDRPGLLSMANSGPNTNGCQFFITTVATPFLNNKHVVFGRVIEGMEIVKMVENTRTTRDKPNQDVVIAQCGEM 183 The following BLAST results are available for this feature:
BLAST of EWM24385.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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