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Properties
| Property Name | Value |
|---|
| Product | peptidyl-prolyl cis-trans isomerase |
| Orig transcript id | gnl|cribi|Naga_100508g3.5687.mrna |
| Orig protein id | gnl|cribi|Naga_100508g3.5687 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:206116..208070 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6302 ID=rna6302|Name=rna6302|organism=Nannochloropsis gaditana|type=mRNA|length=880bp
AGCAGCTACCGGAGGCCGGAGACAAGTTAAATTTCAATGAGGCCTTTTGG
AAGTCGACGCGGAATTTGTTTCGGATTTTGTTCTTCCCTATGACTAATAA
ACTTCTCTGGCATGCTAGATCTTGAATGGCACGCTCGAGTCAGGATGAAA
ACGGGCGTAAAAAAAGACAGAAGAAGGAACAACAACAACACCACCACCAC
CAACAAGCAAATGGGATGGAGGACGACGATGACGGAGATGATAGCTCGGA
CGAGGACTACGTGCCACCCGACGCAGGTCAGTACTTATTGATTCTCTTTT
TATTTCGTACTTGTTTCCAAAGCTTCCTGCCGGATTTGTGGTGCTTGTGG
CAAGCCGGTGGGGAGAGTGGCATGTTTTTCTTCCCTTCTCCAACGCCTTC
TCACTCACTGACTGAGGCACATTTCCACGAGTGAACAGAGGGAGGGGATG
AGAGAAAAAAAGCTTTATGTATTAGAAGCAGGGTTTGACTCCGTCGAACG
CAAAATTCTTGTACTTCCCTGCTTTCCTGTTGGCTTAACGGACTTCCTTT
TCTGGGTGGACAGATGGAGAGGAAGACACGCCGGGCGTGGGCATCCGGGG
TAGCCGCGGGCATGGCAATGACGGTGTGAGCCGTGCAAGCCTGCCTCGAC
CTGGGACGCGGCGGGCGCAGGAAGAGCAAGAACAACGCGTGGAGGCCATG
TGGGAAGAAATGCAGCGGGAAGATCGGAACGGTCTAGCCAAGGTGTTGAG
GAGCACGGAGGGCAGAGGGACAGGCTCGGGGGGGAAAGCCAGGAATGGGG
AGAAGAAACGACGGAGAGCCCAAGAGCTGTTGGCGGGCATTTTTGGAAAC
AACACGGCGTCGTCGATGGTGGCGAAAGCG back to topprotein sequence of rna6302 >rna6302-protein ID=rna6302-protein|Name=rna6302|organism=Nannochloropsis gaditana|type=polypeptide|length=405bp
MLCSRTGTGSRRGAGTWIRTATMRRLRTVIPRKAHAKGHPSRTLGHGVQL
ENSARSSAASVFGVPFTPVLSISSIPLGGAFSRPRSNSNSSSSSSSSSDS
SSSDDSSHSSSSNSSRNLARRHHSTKTSAHAQAVEEEGGDGREGGKNIEK
GRPGTRSGVRPKGTPFRPSRGDNGRGWYELYKEAGPEGFKRYRPPTPFDW
SPPSTATPPSEAPRRSKVFLGISLDKEPLGRIVLELADDILPLAAENFRL
LCQGAGREGGREGGKTGLGYAGSRIHRVVKGAGIVGGDLSTARAPPSSGA
IRPRQRQGGAGNHSGLGPRFFPDESFQIPHTGPGLLSMVSAGAHRNGSVF
HISTHACPHLDGRSVVFGRVVGGVEVLEAVANTYTIRGRPVAVVRVEEAG
VMEAE back to topmRNA from alignment at CM002468.1:206116..208070+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6302 ID=rna6302|Name=rna6302|organism=Nannochloropsis gaditana|type=mRNA|length=1955bp|location=Sequence derived from alignment at CM002468.1:206116..208070+ (Nannochloropsis gaditana)
tctcgcTACCACCGCTCGACAGCTCCCTCCATTATGATCTGAATGCACCG
TGCTTCAGCCATGTGGGTGGATGCAGGAGTGCGCAATGCATGGATGTTGG
ATTAACGCGTGAGTCTCCTGTTTCGCGTGGCTTATGCTTTGTTCACGCAC
AGGAacagggagcaggaggggcgcAGGGACCTGGATTAGGACTGCCACAA
TGCGTCGACTGCGCACTGTGATACCGAGGAAAGCACATGCAAAGGGGCAC
CCATCGAGGACATTGGGGCATGGAGTACAGCTTGAAAACAGTGCTCGTTC
TTCGGCGGCTTCTGTTTTTGGTGTTCCTTTTACCCCGGTGCTTTCCATAT
CATCCATTCCCCTTGGAGGGGCTTTCAGCCGGCCCAgaagcaacagcaac
agcagcagcagtagcagcagcagcagtgatAGTAGCAGTAGCGACGATag
cagccacagcagcagcagcaacagcagcaggaatCTAGCACGTCGTCATC
ATAGTACCAAGACAAGCGCTCACGCGCAGGCagtagaagaggaggggggg
gatggcagggaggggggaaagaacaTCGAGAAGGGCCGCCCTGGCACACG
CAGCGGTGTGCGACCAAAAGGTAAATGCATGCATACTCTTGAGGATTGGC
GCGTATTCGAGACACGAAGGTTGAGATAGCCGGTggtgagggaagaagag
tgtAAAGAAGGCAGGTGGCACTCGGTTTATTCAGGGGGGATGCAAGGAGA
AAGTAGCTTCGCTCTCTGTTACATTTGGGTCGGCATATTTAGCAGGTGGT
GCGATGAAGCAAGGGCAGACTATCAAAAAGTAGAGAAGtgcatgggaagg
aagagatgccTGTCGGCCAAGCCCGTCCACTCCACCCTCTCAcctcgccc
gcttcctccctccccttctcttccccaccAGGAACCCCGTTCCGGCCCTC
CCGCGGAGACAATGGCCGTGGCTGGTACGAGCTCTACAAGGAGGCCGGCC
CCGAGGGATTCAAGCGGTATCGTCCCCCGACCCCCTTCGAttggtcccct
ccttccaccgcgacccccccctccgaAGCTCCCCGACGGAGTAAGGTCTT
CCTCGGGATCTCGCTGGACAAGGAACCGCTGGGACGGATCGTCTTGGAGC
TCGCTGATGACATCCTGCCCCTGGCGGCGGAGAATTTCCGTCTCCTGTgc
cagggggcggggagggagggagggagggagggagggaagacggggctTGG
TTACGCCGGTTCCAGGATCCATCGGGTCGTGAAAGGGGCCGGGATCGTGG
GAGGTGACCTGAGTACCgcccgtgcccctccctcctcgggggCGATCCGA
CCGCGACaacggcagggaggggcggggaacCACTCAGGCCTGGgcccccg
cttcttccccgacgAATCTTTTCAGATTCCCCACACCGGTCCCGGTCTCC
TCAGCATGGTCTCCGCGGGCGCGCACCGGAACGGGTCCGTCTTCCACATC
TCCACCCACGCCTGCCCCCATCTGGACGGGCGGAGCGTGGTGTTTGggcg
ggtggtggggggcgtggaggtgtTGGAGGCGGTAGCCAACACGTACACGA
TCAGGGGGCGGCCGGTGGCAGTggtgagggtggaggaggcaggcgtgatg
gaggcggagtgaggggcagggaggggtgggcggggagattgtaaagaggg
ggatgggagggaaggtaagGATTTCCaaaggcaaagggggggggagagaa
caaggaggggagagggtaTAAGTAGAATGctgatgatgatggcagTGCGC
GAGACAGAGGTAATTCGTGGCcatggcagggaaggaacgaTGAGATGAGA
AGGACGGTGGAGACTCAGGTTGCCGCCCGTCGGTCTGTTGCTTCTTTTAC
TCCATCATAACTATGAGGAGCGTCCTCGTTACAGCTTTGTTGAGTCATCC
ATGCA back to topCoding sequence (CDS) from alignment at CM002468.1:206116..208070+ >rna6302 ID=rna6302|Name=rna6302|organism=Nannochloropsis gaditana|type=CDS|length=2436bp|location=Sequence derived from alignment at CM002468.1:206116..208070+ (Nannochloropsis gaditana)
ATGCTTTGTTCACGCACAGGAacagggagcaggaggggcgcAGGGACCTG
GATTAGGACTGCCACAATGCGTCGACTGCGCACTGTGATACCGAGGAAAG
CACATGCAAAGGGGCACCCATCGAGGACATTGGGGCATGGAGTACAGCTT
GAAAACAGTGCTCGTTCTTCGGCGGCTTCTGTTTTTGGTGTTCCTTTTAC
CCCGGTGCTTTCCATATCATCCATTCCCCTTGGAGGGGCTTTCAGCCGGC
CCAgaagcaacagcaacagcagcagcagtagcagcagcagcagtgatAGT
AGCAGTAGCGACGATagcagccacagcagcagcagcaacagcagcaggaa
tCTAGCACGTCGTCATCATAGTACCAAGACAAGCGCTCACGCGCAGGCag
tagaagaggaggggggggatggcagggaggggggaaagaacaTCGAGAAG
GGCCGCCCTGGCACACGCAGCGGTGTGCGACCAAAAGGAACCCCGTTCCG
GCCCTCCCGCGGAGACAATGGCCGTGGCTGGTACGAGCTCTACAAGGAGG
CCGGCCCCGAGGGATTCAAGCGGTATCGTCCCCCGACCCCCTTCGAttgg
tcccctccttccaccgcgacccccccctccgaAGCTCCCCGACGGAGTAA
GGTCTTCCTCGGGATCTCGCTGGACAAGGAACCGCTGGGACGGATCGTCT
TGGAGCTCGCTGATGACATCCTGCCCCTGGCGGCGGAGAATTTCCGTCTC
CTGTgccagggggcggggagggagggagggagggagggagggaagacggg
gctTGGTTACGCCGGTTCCAGGATCCATCGGGTCGTGAAAGGGGCCGGGA
TCGTGGGAGGTGACCTGAGTACCgcccgtgcccctccctcctcgggggCG
ATCCGACCGCGACaacggcagggaggggcggggaacCACTCAGGCCTGGg
cccccgcttcttccccgacgAATCTTTTCAGATTCCCCACACCGGTCCCG
GTCTCCTCAGCATGGTCTCCGCGGGCGCGCACCGGAACGGGTCCGTCTTC
CACATCTCCACCCACGCCTGCCCCCATCTGGACGGGCGGAGCGTGGTGTT
TGggcgggtggtggggggcgtggaggtgtTGGAGGCGGTAGCCAACACGT
ACACGATCAGGGGGCGGCCGGTGGCAGTggtgagggtggaggaggcaggc
gtgatggaggcggagtgaATGCTTTGTTCACGCACAGGAacagggagcag
gaggggcgcAGGGACCTGGATTAGGACTGCCACAATGCGTCGACTGCGCA
CTGTGATACCGAGGAAAGCACATGCAAAGGGGCACCCATCGAGGACATTG
GGGCATGGAGTACAGCTTGAAAACAGTGCTCGTTCTTCGGCGGCTTCTGT
TTTTGGTGTTCCTTTTACCCCGGTGCTTTCCATATCATCCATTCCCCTTG
GAGGGGCTTTCAGCCGGCCCAgaagcaacagcaacagcagcagcagtagc
agcagcagcagtgatAGTAGCAGTAGCGACGATagcagccacagcagcag
cagcaacagcagcaggaatCTAGCACGTCGTCATCATAGTACCAAGACAA
GCGCTCACGCGCAGGCagtagaagaggaggggggggatggcagggagggg
ggaaagaacaTCGAGAAGGGCCGCCCTGGCACACGCAGCGGTGTGCGACC
AAAAGGAACCCCGTTCCGGCCCTCCCGCGGAGACAATGGCCGTGGCTGGT
ACGAGCTCTACAAGGAGGCCGGCCCCGAGGGATTCAAGCGGTATCGTCCC
CCGACCCCCTTCGAttggtcccctccttccaccgcgacccccccctccga
AGCTCCCCGACGGAGTAAGGTCTTCCTCGGGATCTCGCTGGACAAGGAAC
CGCTGGGACGGATCGTCTTGGAGCTCGCTGATGACATCCTGCCCCTGGCG
GCGGAGAATTTCCGTCTCCTGTgccagggggcggggagggagggagggag
ggagggagggaagacggggctTGGTTACGCCGGTTCCAGGATCCATCGGG
TCGTGAAAGGGGCCGGGATCGTGGGAGGTGACCTGAGTACCgcccgtgcc
cctccctcctcgggggCGATCCGACCGCGACaacggcagggaggggcggg
gaacCACTCAGGCCTGGgcccccgcttcttccccgacgAATCTTTTCAGA
TTCCCCACACCGGTCCCGGTCTCCTCAGCATGGTCTCCGCGGGCGCGCAC
CGGAACGGGTCCGTCTTCCACATCTCCACCCACGCCTGCCCCCATCTGGA
CGGGCGGAGCGTGGTGTTTGggcgggtggtggggggcgtggaggtgtTGG
AGGCGGTAGCCAACACGTACACGATCAGGGGGCGGCCGGTGGCAGTggtg
agggtggaggaggcaggcgtgatggaggcggagtga back to top
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