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Properties
| Property Name | Value |
|---|
| Product | kef-type k transport systems -binding component |
| Orig transcript id | gnl|cribi|Naga_100832g2.991.mrna |
| Orig protein id | gnl|cribi|Naga_100832g2.991 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:163981..166137 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6281 ID=rna6281|Name=rna6281|organism=Nannochloropsis gaditana|type=mRNA|length=1470bp
AGTTCCCGGACGGAGAGTACATTCGAAAGAACGTTCATGGTGGGGGCACA
GAGCAGTCGCCGTTCACCTCCATTCCCGTTGCGGCCTATTGGGTCATCAT
GACGGCCACCACCGTGGGATTCGGAGATTTCTACCCCACCTCCACACTGG
GTCGCTTCGTGGCCATCGTCGCTGCCTACACGGGCATCGTCGGCATCGCC
CTCCCCTCCACCATCATCGGCAAGAGCTTCATCGACGTCTACTTCCGGGT
GTTGGAGGAGCGAAAAAAGGAGGAACAGCTCCTCAAGGCGGAGAGAGAGC
GGGAAGAAGAGGCCAGGAAAGCGAGGGGGGACACGGGCACGGGCTTGATG
GCATTGCTCTGTTGTCGGCGGCGACGGCGGGCCCCCGCGGTGGTGCCAGG
GATGGAGGGGGGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGGGGGA
AGGAGGGGGGAAGACTTGTCGGGGGATTAAAAACGGAGGCAGATTCCACG
CCCTCCCAGTCCCCCCGACGGCCCTGGCGGGATTTCTACATCGAGCGGGA
GAACACGGTGGCGCAGCGGGTGCTACGGAAGGAGAAGGAATTGGCGGAGG
AGAAAGCGAAGGAGGACGCGCTGGTGCGGGAGATCGAAGCCCAAGTCTGG
GCCCAAGAGCAGGAGGAACGGGCACAGGTCGGGGCCGAGGGCGAGGAAGA
GGGCCGGGCCCGGTGCGACGGGAAAGAGGGAGGGAAATGCCAGGGGTACA
CGCTGGCCGCTTCGGTCTTGGAAGGGCGGGGGAGCAACGTACCTTCGGCC
CATTTGATGACCTGCATCCACCAAGCGAATCGGGGGGGGGCCTCAGCCTC
GGCGGCTTTACAGGCCATTCCCTTGGCGAAGAAGGTACGGAAACAACAGC
AGCAGATAGAGAAGCTCGCGCACATAGTGGGCGATCAATTGCACCATATC
CATGCCCTTTCGGAAGCGTTGACCGAGATGGAACGGGCGACGGTCTATCT
GATGAGTCGCTTCGACGAACTTGAAAGCGATTGAGGCCCGGCCCATATCC
AGGCTGCAAGGAGAGCGGCCCATATCGTGCGATCCAGGCTGCAAGGAGAG
CGTGCGGTGCCAAGTTGAACGAAAAGCAAAAGCCGCACGAGCCCGTGACT
GGAAGAGGAGTACCGCACATATAGATAAATCTATATATATATATGTATAC
GCCAAATGTAAATTTTGGTCCGGAAGGACAATAGGTTTGGCACTAAGTGC
AAAACACGGCAATAAACGAGGCGAAAGTTGGGGTGGGGGCGGGAAAAGGG
ATTCTTCAACGAGTCGGTAGTAAGACGCTGAAACCAATGCCGCCAACTCG
ATTTAAAAGTTCACGCCTTCGTAGATGATTGGACGAGCATGTGAAAGTCG
ATGGAGCAATGAAAACCCAACGTTTTGTTGTTTTCTTTGGTAAGCAATGT
CAATCCATTGGATCGTGTCT back to topprotein sequence of rna6281 >rna6281-protein ID=rna6281-protein|Name=rna6281|organism=Nannochloropsis gaditana|type=polypeptide|length=228bp
MALLCCRRRRRAPAVVPGMEGGREGGKEGGKEGGKEGGRLVGGLKTEADS
TPSQSPRRPWRDFYIERENTVAQRVLRKEKELAEEKAKEDALVREIEAQV
WAQEQEERAQVGAEGEEEGRARCDGKEGGKCQGYTLAASVLEGRGSNVPS
AHLMTCIHQANRGGASASAALQAIPLAKKVRKQQQQIEKLAHIVGDQLHH
IHALSEALTEMERATVYLMSRFDELESD back to topmRNA from alignment at CM002468.1:163981..166137- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6281 ID=rna6281|Name=rna6281|organism=Nannochloropsis gaditana|type=mRNA|length=2157bp|location=Sequence derived from alignment at CM002468.1:163981..166137- (Nannochloropsis gaditana)
AGTTCCCGGACGGAGAGTACATTCGAAAGAACGTTCATGGTGGGGGCACA
GAGCAGTCGCCGTTCACCTCCATTCCCGTTGCGGCCTATTGGGTCATCAT
GACGGCCACCACCGTGGGATGTAAGAGCCAACGGAGGGAGGGTGGAAAGG
AGGGCGGGGAAAGGCGGTTAGGGGGGGGACGCGTTTTCAGGCGTCAGTGT
AACCATGGCGCTTCCCCTAGTGGCTTGCTGACCCCTCTTTCCTTCCTTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCGGTCCCAGTC
GGAGATTTCTACCCCACCTCCACACTGGGTCGCTTCGTGGCCATCGTCGC
TGCCTACACGGGCATCGTCGGCATCGCCCTCCCCTCCACCATCATCGGCA
AGAGCTTCATCGACGTCTACTTCCGGGTAGGTTCCCCCCCCCTTGCATCC
CTTGTGTGCTTGTGTGGGGGGAGAGTCCTGCTGCTTGCTGTTGTCCTTTC
TACGCGTTGATTTGCGCTCTCTCTCGGCTTTATTCGGGGGGAGGGGTGTG
TGGGTGCCGGAGGTTTCTTGGCGACTTTAGGTGCTTCTCGAACCCAATCA
CTTCTCCGGGTCCGGGGCAGAGCCTTTGGGGGCACTATAGACCTCCCTTT
GGTGTCCCTGTTCATGTCTCCTCCACCGACGCCCACCTCGGACCCCGTGT
CTTCCAGGTGTTGGAGGAGCGAAAAAAGGAGGAACAGCTCCTCAAGGCGG
AGAGAGAGCGGGAAGAAGAGGCCAGGAAAGCGAGGGGGGACACGGGCACG
GGCTTGATGGCATTGCTCTGTTGTCGGCGGCGACGGCGGGCCCCCGCGGT
GGTGCCAGGGATGGAGGGGGGGAGGGAGGGAGGGAAGGAGGGAGGGAAGG
AGGGGGGGAAGGAGGGGGGAAGACTTGTCGGGGGATTAAAAACGGAGGCA
GATTCCACGCCCTCCCAGTCCCCCCGACGGCCCTGGCGGGATTTCTACAT
CGAGCGGGAGAACACGGTGGCGCAGCGGGTGCTACGGAAGGAGAAGGAAT
TGGCGGAGGAGAAAGCGAAGGAGGACGCGCTGGTGCGGGAGATCGAAGCC
CAAGTCTGGGCCCAAGAGCAGGAGGAACGGGCACAGGTCGGGGCCGAGGG
CGAGGAAGAGGGCCGGGCCCGGTGCGACGGGAAAGAGGGAGGGAAATGCC
AGGGGTACACGCTGGCCGCTTCGGTCTTGGAAGGGCGGGGGAGCAACGTA
CCTTCGGCCCATTTGATGACCTGCATCCACCAAGCGAATCGGGGGGGGGC
CTCAGCCTCGGCGGCTTTACAGGCCATTCCCTTGGCGAAGAAGGTAGGGG
GGAGGGAGGGCGGGGTCGAGGGAGGGGGGAAGGGAGGGGTCGAGGGAGGG
GTGGTGGACGTTCGTGGGGATGGAAACTGGGAGTGGTCTCGTACAGTGGC
AGATGAACGGGAATCTTCATGGCACAGGTACGGAAACAACAGCAGCAGAT
AGAGAAGCTCGCGCACATAGTGGGCGATCAATTGCACCATATCCATGCCC
TTTCGGAAGCGTTGACCGAGATGGTGAGTGCGGGGGAGGGGAGGGGGCGA
GATAGCGCCCGGGGAGAATGGATGTGGTCCTCGAGATGTTGTCATTGAGC
TTGCACCTCCCTCACAGGAACGGGCGACGGTCTATCTGATGAGTCGCTTC
GACGAACTTGAAAGCGATTGAGGCCCGGCCCATATCCAGGCTGCAAGGAG
AGCGGCCCATATCGTGCGATCCAGGCTGCAAGGAGAGCGTGCGGTGCCAA
GTTGAACGAAAAGCAAAAGCCGCACGAGCCCGTGACTGGAAGAGGAGTAC
CGCACATATAGATAAATCTATATATATATATGTATACGCCAAATGTAAAT
TTTGGTCCGGAAGGACAATAGGTTTGGCACTAAGTGCAAAACACGGCAAT
AAACGAGGCGAAAGTTGGGGTGGGGGCGGGAAAAGGGATTCTTCAACGAG
TCGGTAGTAAGACGCTGAAACCAATGCCGCCAACTCGATTTAAAAGTTCA
CGCCTTCGTAGATGATTGGACGAGCATGTGAAAGTCGATGGAGCAATGAA
AACCCAACGTTTTGTTGTTTTCTTTGGTAAGCAATGTCAATCCATTGGAT
CGTGTCT back to topCoding sequence (CDS) from alignment at CM002468.1:163981..166137- >rna6281 ID=rna6281|Name=rna6281|organism=Nannochloropsis gaditana|type=CDS|length=2061bp|location=Sequence derived from alignment at CM002468.1:163981..166137- (Nannochloropsis gaditana)
GAACGGGCGACGGTCTATCTGATGAGTCGCTTCGACGAACTTGAAAGCGA
TTGAGTACGGAAACAACAGCAGCAGATAGAGAAGCTCGCGCACATAGTGG
GCGATCAATTGCACCATATCCATGCCCTTTCGGAAGCGTTGACCGAGATG
ATGGCATTGCTCTGTTGTCGGCGGCGACGGCGGGCCCCCGCGGTGGTGCC
AGGGATGGAGGGGGGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGGG
GGAAGGAGGGGGGAAGACTTGTCGGGGGATTAAAAACGGAGGCAGATTCC
ACGCCCTCCCAGTCCCCCCGACGGCCCTGGCGGGATTTCTACATCGAGCG
GGAGAACACGGTGGCGCAGCGGGTGCTACGGAAGGAGAAGGAATTGGCGG
AGGAGAAAGCGAAGGAGGACGCGCTGGTGCGGGAGATCGAAGCCCAAGTC
TGGGCCCAAGAGCAGGAGGAACGGGCACAGGTCGGGGCCGAGGGCGAGGA
AGAGGGCCGGGCCCGGTGCGACGGGAAAGAGGGAGGGAAATGCCAGGGGT
ACACGCTGGCCGCTTCGGTCTTGGAAGGGCGGGGGAGCAACGTACCTTCG
GCCCATTTGATGACCTGCATCCACCAAGCGAATCGGGGGGGGGCCTCAGC
CTCGGCGGCTTTACAGGCCATTCCCTTGGCGAAGAAGGAACGGGCGACGG
TCTATCTGATGAGTCGCTTCGACGAACTTGAAAGCGATTGAGTACGGAAA
CAACAGCAGCAGATAGAGAAGCTCGCGCACATAGTGGGCGATCAATTGCA
CCATATCCATGCCCTTTCGGAAGCGTTGACCGAGATGATGGCATTGCTCT
GTTGTCGGCGGCGACGGCGGGCCCCCGCGGTGGTGCCAGGGATGGAGGGG
GGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGGGGGAAGGAGGGGGG
AAGACTTGTCGGGGGATTAAAAACGGAGGCAGATTCCACGCCCTCCCAGT
CCCCCCGACGGCCCTGGCGGGATTTCTACATCGAGCGGGAGAACACGGTG
GCGCAGCGGGTGCTACGGAAGGAGAAGGAATTGGCGGAGGAGAAAGCGAA
GGAGGACGCGCTGGTGCGGGAGATCGAAGCCCAAGTCTGGGCCCAAGAGC
AGGAGGAACGGGCACAGGTCGGGGCCGAGGGCGAGGAAGAGGGCCGGGCC
CGGTGCGACGGGAAAGAGGGAGGGAAATGCCAGGGGTACACGCTGGCCGC
TTCGGTCTTGGAAGGGCGGGGGAGCAACGTACCTTCGGCCCATTTGATGA
CCTGCATCCACCAAGCGAATCGGGGGGGGGCCTCAGCCTCGGCGGCTTTA
CAGGCCATTCCCTTGGCGAAGAAGGAACGGGCGACGGTCTATCTGATGAG
TCGCTTCGACGAACTTGAAAGCGATTGAGTACGGAAACAACAGCAGCAGA
TAGAGAAGCTCGCGCACATAGTGGGCGATCAATTGCACCATATCCATGCC
CTTTCGGAAGCGTTGACCGAGATGATGGCATTGCTCTGTTGTCGGCGGCG
ACGGCGGGCCCCCGCGGTGGTGCCAGGGATGGAGGGGGGGAGGGAGGGAG
GGAAGGAGGGAGGGAAGGAGGGGGGGAAGGAGGGGGGAAGACTTGTCGGG
GGATTAAAAACGGAGGCAGATTCCACGCCCTCCCAGTCCCCCCGACGGCC
CTGGCGGGATTTCTACATCGAGCGGGAGAACACGGTGGCGCAGCGGGTGC
TACGGAAGGAGAAGGAATTGGCGGAGGAGAAAGCGAAGGAGGACGCGCTG
GTGCGGGAGATCGAAGCCCAAGTCTGGGCCCAAGAGCAGGAGGAACGGGC
ACAGGTCGGGGCCGAGGGCGAGGAAGAGGGCCGGGCCCGGTGCGACGGGA
AAGAGGGAGGGAAATGCCAGGGGTACACGCTGGCCGCTTCGGTCTTGGAA
GGGCGGGGGAGCAACGTACCTTCGGCCCATTTGATGACCTGCATCCACCA
AGCGAATCGGGGGGGGGCCTCAGCCTCGGCGGCTTTACAGGCCATTCCCT
TGGCGAAGAAG back to top
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