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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101269g1.10057.mrna |
| Orig protein id | gnl|cribi|Naga_101269g1.10057 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:142742..144181 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6272 ID=rna6272|Name=rna6272|organism=Nannochloropsis gaditana|type=mRNA|length=1424bp
GCCCACCGCCTGGTCTCCCTCGCCTGGGGACAGGACTCCTCCCCCGTCCG
CCGCTCCCCCCCGCCCTCCCTCCCCAAGTCCATGTCAGAGGAAGACTCCT
TCTCCACCTTCTCCCTCCCCTTCCCTCCTCATCAACCCCCGGCCCACCAC
CCTCGCCTTCTTCCCTCCCTTCCTCCTCCTTACCCTGGATCCGTGCATCC
ACCCCCGCCTCTTGCACCGGGAGCAGCGGTGACGACTAGGGAAGAAGCAG
CGAGGAGGTTGAGGCGGCTGGTAACGGATTTGGCGATGCGCGTGGACGAA
AGAAGAAGGGTGCATGGGGAGGTAGGGAAGGGAGGGGATAGAGGCCAACG
GTCTAGATGTCTTTGGGGCGCCCTGGGAGACAACGCAAGGCTACAATCCT
TCGCTCCCTCCCTCCCTCCCTCCCTCTCCCTCCCTGCAGCTTCCCCACAC
TCTGCGCATCACCATCATCCGCCGCATCTTTTCCTGCCCCGCTTCCTCGC
CCCCCTCCTCCTCCACCACCCGGCGAGAATCTCGGCAGATTCCTTTGAAA
AACCCTCTTACAATTTTCTGCCCCCGCCCATCCTCCCTGCCTGCGCCTTC
CCTCCCTCTCTCCCTCCCTCCTTCGTTCCCTCCCCTTCCTCCCGCCCTCG
CCTCTCCTTCCTCCTCCTCCCTCCCTTCCTCCTTCCCTTCCTCCCTTCCT
CCTCCTCCGGTCGCTCCCCAGGTAGTCGACGCCCTCTTCGACGCCGCCAA
GGCGCTGCTTTTCGACCGCTTGCTCCCTCCCCCTCCTTCCCTCCTTCCCT
CCCGCCCTCCCTCCACCCTTCCCTTCCCTTTGGCCATGATGAATGTATGT
CTCGGCAATTTTCGGTCCGTCGTCGGTGCGAGAGGGAGCGAGGGCGGGAA
GGAGGGAGGGAAGGAAGGGAGGCAGGGCACCTCCCCTTTCCTCTTGCGGT
TTGCGAAAGCGTCAGGCCGTGGGGCTGAGGAAGGAGGGTGGAAGGGAGGC
GGAATCGATGAAAAGGACGAAGACGAGGAGGAGGGGGAGGGAGGGAAGGA
CGGAAGAGGAGGGGAGGAGGTGGTGACGGAGAAGGGGAAAGACGGGGGGA
AAGAAGAGGAGGGGGCAACGAAGGAAGAGAGGAGGGAGGAAAAGCAGGCT
TCCAAACGTCCGAGACCGGCTAGCGTGTTGGTGGAATGTGATCAATGTGG
AGGGCTTGTGCAGGAGGAGGAGGAGGTGCACAAGCGCGGGCATGCTGCGG
AAGAAAAAAGGTCGGAGAGAGAGGGAGGAGGGAGGGAAAGAAACGTTTCC
ATGACGGATGAGAGGGGCCTGGTGGAGCGAGGGGTGGGAATGGCCTGGAA
GCTGTACTGCTCTCTGCCCAAACTTACCCGGAGGGAGATTTTGGCGGAGG
CCCGGGAGATGCATGCGGAGAGGG back to topprotein sequence of rna6272 >rna6272-protein ID=rna6272-protein|Name=rna6272|organism=Nannochloropsis gaditana|type=polypeptide|length=127bp
PPSLHPSLPFSGAYDAVLLANVLCRLPDPRLALEMIGGREGGREGVLAPG
GLFMLTTPFSWKECFTPKEKWLGGAAPDGKDSHAELKRLMGGLGFKLLKE
QEMPLIIHQHARLFELITPMATVWQKM back to topmRNA from alignment at CM002468.1:142742..144181- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6272 ID=rna6272|Name=rna6272|organism=Nannochloropsis gaditana|type=mRNA|length=1440bp|location=Sequence derived from alignment at CM002468.1:142742..144181- (Nannochloropsis gaditana)
CCTCCCTCCCTCCATCCTTCCCTCCCTTTCTCAGGTGCCTACGACGCTGT
CCTCCTCGCGAACGTCTTGTGTCGCCTCCCAGACCCACGACTAGCCCTTG
AGATGATCGGAGGGAGGGAGGGAGGGAGGGAGGGCGTTTTGGCCCCCGGG
GGCTTGTTCATGCTGACCACGCCCTTCTCGTGGAAGGAATGCTTCACGCC
CAAGGAGAAGTGGCTGGGGGTGAGGAGGGGGGAGGGAAGGAGGGAGGGAA
GGAGGAAGGGAGGGAGAAGTGATCTTTATCATCACAGGATTTAATCGGGA
AAGCGTGCACTGCTCGGGGAGTTGAGAAAATTCTCTTCCTTGACCTCATG
CTCGATGACCCCTATCCCTACCCCGGGGCCTCGCGGCCCTCCTATGCACC
TGTCGCGTCTCCGCACATGCATAGTCTTCTGCACAAGCATTCTCATCATC
TTTCCAATTCTTCCCCTTCCTCCTTCCCCATCACCCTCCCTTTCTCCCTT
GCCGCCGTGCTCCGCAGGGCGCGGCGCCTGATGGGAAAGATTCGCATGCC
GAGTTGAAACGGCTCATGGGCGGTTTAGGATTCAAACTTTTGAAAGAGCA
GGAGATGCCTTTGATCATCCACCAGCACGCGAGGCTTTTCGAGCTCATCA
CTCCCATGGCAACAGTCTGGCAGAAAATGTGAGCCGCGAGGTGACCGTTA
TCCGTTATCTTCGGCGGTTGCATGATTCAACTGTTTGAATTCCGACGATA
AGAAGCAGATTGATCGATACAAGAAAAGATTAGGAATTGTTGCTCTTAAA
GGCAATTGATTGAAATGATGGAGGCCAAATTTGTGCTTGAGGGATATGGC
TGATGACAGCACAGACATGGCAAATCGAATCTAAATTATGTAATACTGAC
AAGGAGGAGTGAAGAGAAGCCAGGGCGTCGACAAGGGGAGACGAAGGAAG
ATATTTAATTTGAAAATTAACGGATGAGCAAGGAGAAAGCGCCGGGCACA
CCAAGGAGAATGGGAAGAAAGAAGGGTGGAAGGAAGAGAGGCAGGAGAGC
AGGTCCATAAGAATGAGAGAGAGAAGGCAATGGATCGGGAAAGGGGTTGA
AAGAAGGGAAAAGCGAGCATCACGTAGGGGAAACGGTCAAGTCTCTAAGG
CGGGGAAGGGGGAGGTTGAGGTGATAGACTTTCCACCGATGCAATGGGAG
GGCTCCTTCCTCATCCGTGGATGATCGATGCAGGTTCAGGGCCTTATGAT
GAAAGTGGAAGGAGCGATAATTCAGGAGCAGTATTGGGAGGCAGGAAGGG
AGGATGCACTGACGTCAGTCATCATCCCTCCTCCAAGAACACCTCAGCGA
TGGACGCGTTTCGAAAGAAGCAAGGAGCAAGCTGTGTTGAACAGCTTCGT
GCGCCCACAAGTGTTCTCCGTTAGCATGAACCTTCCATCG back to topCoding sequence (CDS) from alignment at CM002468.1:142742..144181- >rna6272 ID=rna6272|Name=rna6272|organism=Nannochloropsis gaditana|type=CDS|length=768bp|location=Sequence derived from alignment at CM002468.1:142742..144181- (Nannochloropsis gaditana)
GGCGCGGCGCCTGATGGGAAAGATTCGCATGCCGAGTTGAAACGGCTCAT
GGGCGGTTTAGGATTCAAACTTTTGAAAGAGCAGGAGATGCCTTTGATCA
TCCACCAGCACGCGAGGCTTTTCGAGCTCATCACTCCCATGGCAACAGTC
TGGCAGAAAATGTGACCTCCCTCCCTCCATCCTTCCCTCCCTTTCTCAGG
TGCCTACGACGCTGTCCTCCTCGCGAACGTCTTGTGTCGCCTCCCAGACC
CACGACTAGCCCTTGAGATGATCGGAGGGAGGGAGGGAGGGAGGGAGGGC
GTTTTGGCCCCCGGGGGCTTGTTCATGCTGACCACGCCCTTCTCGTGGAA
GGAATGCTTCACGCCCAAGGAGAAGTGGCTGGGGGGCGCGGCGCCTGATG
GGAAAGATTCGCATGCCGAGTTGAAACGGCTCATGGGCGGTTTAGGATTC
AAACTTTTGAAAGAGCAGGAGATGCCTTTGATCATCCACCAGCACGCGAG
GCTTTTCGAGCTCATCACTCCCATGGCAACAGTCTGGCAGAAAATGTGAC
CTCCCTCCCTCCATCCTTCCCTCCCTTTCTCAGGTGCCTACGACGCTGTC
CTCCTCGCGAACGTCTTGTGTCGCCTCCCAGACCCACGACTAGCCCTTGA
GATGATCGGAGGGAGGGAGGGAGGGAGGGAGGGCGTTTTGGCCCCCGGGG
GCTTGTTCATGCTGACCACGCCCTTCTCGTGGAAGGAATGCTTCACGCCC
AAGGAGAAGTGGCTGGGG back to top
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