EWM24431.1, cds6242 (CDS) Nannochloropsis gaditana

Overview
NameEWM24431.1
Unique Namecds6242
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:110279..110973 +
Alignment locationCM002468.1:111097..111696 +
Alignment locationCM002468.1:111744..111747 +

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Properties
Property NameValue
Protein idEWM24431.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101382g1.3583.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:110279..110973 +
CM002468.1supercontigCM002468.1:111097..111696 +
CM002468.1supercontigCM002468.1:111744..111747 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24431.1 vs. NCBI_GenBank
Match: gi|585105867|gb|EWM24431.1| (hypothetical protein Naga_101382g1 [Nannochloropsis gaditana])

HSP 1 Score: 854.744 bits (2207), Expect = 0.000e+0
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0 
Query:    1 MKEGRDGCGHPPLEGNRSPPVPTGLGRSGDSRYSKKRLAASPSRSRLRRRWRQDRIMYFKRSPFHPVVLTAPLLLLSLLSSFCGRAYSFVLRESVPCNRPLFRLPHRGERSTLSPLIPSSSPPTLLYAAAPRKRSKIKIGEAEMSFFFDEEEEDEIGEEEGWSQAAWQEGTEEDGAEGGREGGREGEGGRGRRLARSTAAEIMQAKIDDPYYQYRDRRMFKMGEDERAYYDSFVLTLSLFAYSSGSMRTSPRSPPPLPPPLPPPPSSTSPSSSVPSNLIVGSGTELYPGRSAGMSPAVLEAISSFLVEGGEEPLLLTEREEMGGSGGGGRFGVGQGGKEEAKEKERVRWLSDEAAEGNARGAVEEREEGERLFSSEWYAGEMRRRNDQGKYSLALTYWERLLREGIRPCPAAYTQALRACRFTGEMELALEL 432
            MKEGRDGCGHPPLEGNRSPPVPTGLGRSGDSRYSKKRLAASPSRSRLRRRWRQDRIMYFKRSPFHPVVLTAPLLLLSLLSSFCGRAYSFVLRESVPCNRPLFRLPHRGERSTLSPLIPSSSPPTLLYAAAPRKRSKIKIGEAEMSFFFDEEEEDEIGEEEGWSQAAWQEGTEEDGAEGGREGGREGEGGRGRRLARSTAAEIMQAKIDDPYYQYRDRRMFKMGEDERAYYDSFVLTLSLFAYSSGSMRTSPRSPPPLPPPLPPPPSSTSPSSSVPSNLIVGSGTELYPGRSAGMSPAVLEAISSFLVEGGEEPLLLTEREEMGGSGGGGRFGVGQGGKEEAKEKERVRWLSDEAAEGNARGAVEEREEGERLFSSEWYAGEMRRRNDQGKYSLALTYWERLLREGIRPCPAAYTQALRACRFTGEMELALEL
Sbjct:    1 MKEGRDGCGHPPLEGNRSPPVPTGLGRSGDSRYSKKRLAASPSRSRLRRRWRQDRIMYFKRSPFHPVVLTAPLLLLSLLSSFCGRAYSFVLRESVPCNRPLFRLPHRGERSTLSPLIPSSSPPTLLYAAAPRKRSKIKIGEAEMSFFFDEEEEDEIGEEEGWSQAAWQEGTEEDGAEGGREGGREGEGGRGRRLARSTAAEIMQAKIDDPYYQYRDRRMFKMGEDERAYYDSFVLTLSLFAYSSGSMRTSPRSPPPLPPPLPPPPSSTSPSSSVPSNLIVGSGTELYPGRSAGMSPAVLEAISSFLVEGGEEPLLLTEREEMGGSGGGGRFGVGQGGKEEAKEKERVRWLSDEAAEGNARGAVEEREEGERLFSSEWYAGEMRRRNDQGKYSLALTYWERLLREGIRPCPAAYTQALRACRFTGEMELALEL 432
The following BLAST results are available for this feature:
BLAST of EWM24431.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105867|gb|EWM24431.1|0.000e+0100.00hypothetical protein Naga_101382g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6257rna6257Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications