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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101382g1.3583.mrna |
| Orig protein id | gnl|cribi|Naga_101382g1.3583 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:110279..111747 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6257 ID=rna6257|Name=rna6257|organism=Nannochloropsis gaditana|type=mRNA|length=641bp
TCCCTACTCCTCCCTCCCTCCCTCCCTCCCTATTCCACAAGCCATACCTC
CCACTGCTTCCTCAATCTGCTCTCCCTCGTGCATATTCATGTCCTCCCTC
CCTCCCTCTATCCCTCCCGTCACCCTTCTTTCCTCTTCCCCCCTTCCTGT
CCTCTACGCCTCGTCCTTTCTTCCACCACGCCCGTCCCACCTCCCTCCTC
TTCGCTTGACGTCCCCCCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGTCACATACCTCT
TCCTCTACCTCCTCCCCGCCCTGGGTGAGTGCCTGGCCGTCTGCATCATC
TTCCTCGTTCACTTCCAGCAGTGGGAACTCTCCCTCCTCCTCTTCTCCTC
CCTCCTCCTCTACGGCTTCGTCACGATTCGGATCACCCTCTGGCGGAAGA
AATTCCGGGAGGCCACCAACCAGAAGGACAACGAGGTGGGGAGGGAGGGA
GGGAGGGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGT
GAGTGGGTGAGTGAGTGAATGAGTGAGGGAGGGCCTCATCGGCTTTCGTG
GATGGCCTGCATGACGTGCCGTCGAATCGGCGTGGGAGGGG back to topprotein sequence of rna6257 >rna6257-protein ID=rna6257-protein|Name=rna6257|organism=Nannochloropsis gaditana|type=polypeptide|length=432bp
MKEGRDGCGHPPLEGNRSPPVPTGLGRSGDSRYSKKRLAASPSRSRLRRR
WRQDRIMYFKRSPFHPVVLTAPLLLLSLLSSFCGRAYSFVLRESVPCNRP
LFRLPHRGERSTLSPLIPSSSPPTLLYAAAPRKRSKIKIGEAEMSFFFDE
EEEDEIGEEEGWSQAAWQEGTEEDGAEGGREGGREGEGGRGRRLARSTAA
EIMQAKIDDPYYQYRDRRMFKMGEDERAYYDSFVLTLSLFAYSSGSMRTS
PRSPPPLPPPLPPPPSSTSPSSSVPSNLIVGSGTELYPGRSAGMSPAVLE
AISSFLVEGGEEPLLLTEREEMGGSGGGGRFGVGQGGKEEAKEKERVRWL
SDEAAEGNARGAVEEREEGERLFSSEWYAGEMRRRNDQGKYSLALTYWER
LLREGIRPCPAAYTQALRACRFTGEMELALEL back to topmRNA from alignment at CM002468.1:110279..111747+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6257 ID=rna6257|Name=rna6257|organism=Nannochloropsis gaditana|type=mRNA|length=1469bp|location=Sequence derived from alignment at CM002468.1:110279..111747+ (Nannochloropsis gaditana)
ATGAAAGAAGGACGGGATGGCTGTGGCCATCCGCCCCTGGAAGGCAATAG
GAGTCCCCCAGTACCCACCGGGCTTGGTAGAAGCGGGGACAGCCGCTATA
GTAAGAAGCGTTTGGCAGCATCACCGTCAAGATCAAGACtaagaagaaga
tggcggcAGGACAGAATTATGTATTTTAAACGcagccctttccatcccGT
CGTACTGACtgcgcctctcctcctccttagCCTACTGTCGTCGTTTTGTG
GTCGAGCCTACTCATTTGTCTTGCGTGAAAGTGTTCCATGCAATCGTCCT
TTATTCCGTCTGCCACACCGTGGGGAGAGAAGtaccctttcccccttgat
accttcctcctctcctcctacTCTACTCTATGCGGCTGCACCCCGTAAAC
GTAGCAAGATTAAGataggggaggcggagatgtcttttttcttcgacgag
gaggaagaagatgagataggagaagaggagggatggtcCCAGGCTGCATG
GCAGGAGGGcacggaagaggacggagcagagggagggagggagggaggga
gagagggggagggaggacgagggaggcgtctGGCACGAAGCACGGCTGCC
GAGATCATGCAAGCGAAGATCGACGACCCTTACTACCAGTACCGGGACCG
ACGCATGTTTAaaatgggggaggacgagcggGCGTATTACGACAGGTGGG
ACAggatgcgggagggagggagggagggaaggagggagggagggagggag
ggagggaaggagggagggagcaaggaagggaaataAGGCTGCATAAGCTT
CTATCTTTGTGTCTAAAGCTTTGTTCTCACGCTGTCTCTCTTCGCCTACT
CCTCAGGATCAATGCGTACAAgcccccgttcccctcctccccttcctcct
ccccttcctccccccccctcctccacctccccttcctcctccgtgccctc
CAACCTCATCGTGGGCTCCGGAACAGAGCTGTACCCTGGCCGCTCAGCGG
GCATGTCTCCCGCGGTCTTGGAggcgatctcctccttccttgtcgaagga
ggggaggagcccttgctcttgacggaaagagaggagatgggaggaagtgg
aggggggggaaggttcGGGGtcgggcaggggggaaaagaggaagcgaagg
agaaggaacgggtGCGGTGGTTGTCGGACGAAGCCGCGGAGGGCAATGCT
CgtggggcggtggaggagcgggaggaaggggaacgccTGTTTAGCAGCGA
ATGGTACGCTGGGGAAATGCGACGACGGAACGACCAGGGGAAGTACTCCT
TGGCACTGACGTACTGGGAGCGGTTGCTGCGGGAAGGGATTCGCCCGTGC
CCGGCGGCCTATACGCAGGCGCTCCGGGCGTGTCGTTTTACCGGCGAGAT
GGAGCTGGCATTGGAGCTGTTGGTGGATATGCGGGAGGATGGCGCGGCAG
TCGATCTGTACGCAGGTAG back to topCoding sequence (CDS) from alignment at CM002468.1:110279..111747+ >rna6257 ID=rna6257|Name=rna6257|organism=Nannochloropsis gaditana|type=CDS|length=3897bp|location=Sequence derived from alignment at CM002468.1:110279..111747+ (Nannochloropsis gaditana)
ATGAAAGAAGGACGGGATGGCTGTGGCCATCCGCCCCTGGAAGGCAATAG
GAGTCCCCCAGTACCCACCGGGCTTGGTAGAAGCGGGGACAGCCGCTATA
GTAAGAAGCGTTTGGCAGCATCACCGTCAAGATCAAGACtaagaagaaga
tggcggcAGGACAGAATTATGTATTTTAAACGcagccctttccatcccGT
CGTACTGACtgcgcctctcctcctccttagCCTACTGTCGTCGTTTTGTG
GTCGAGCCTACTCATTTGTCTTGCGTGAAAGTGTTCCATGCAATCGTCCT
TTATTCCGTCTGCCACACCGTGGGGAGAGAAGtaccctttcccccttgat
accttcctcctctcctcctacTCTACTCTATGCGGCTGCACCCCGTAAAC
GTAGCAAGATTAAGataggggaggcggagatgtcttttttcttcgacgag
gaggaagaagatgagataggagaagaggagggatggtcCCAGGCTGCATG
GCAGGAGGGcacggaagaggacggagcagagggagggagggagggaggga
gagagggggagggaggacgagggaggcgtctGGCACGAAGCACGGCTGCC
GAGATCATGCAAGCGAAGATCGACGACCCTTACTACCAGTACCGGGACCG
ACGCATGTTTAaaatgggggaggacgagcggGCGTATTACGACAGCTTTG
TTCTCACGCTGTCTCTCTTCGCCTACTCCTCAGGATCAATGCGTACAAgc
ccccgttcccctcctccccttcctcctccccttcctccccccccctcctc
cacctccccttcctcctccgtgccctcCAACCTCATCGTGGGCTCCGGAA
CAGAGCTGTACCCTGGCCGCTCAGCGGGCATGTCTCCCGCGGTCTTGGAg
gcgatctcctccttccttgtcgaaggaggggaggagcccttgctcttgac
ggaaagagaggagatgggaggaagtggaggggggggaaggttcGGGGtcg
ggcaggggggaaaagaggaagcgaaggagaaggaacgggtGCGGTGGTTG
TCGGACGAAGCCGCGGAGGGCAATGCTCgtggggcggtggaggagcggga
ggaaggggaacgccTGTTTAGCAGCGAATGGTACGCTGGGGAAATGCGAC
GACGGAACGACCAGGGGAAGTACTCCTTGGCACTGACGTACTGGGAGCGG
TTGCTGCGGGAAGGGATTCGCCCGTGCCCGGCGGCCTATACGCAGGCGCT
CCGGGCGTGTCGTTTTACCGGCGAGATGGAGCTGGCATTGGAGCTGTAGA
TGAAAGAAGGACGGGATGGCTGTGGCCATCCGCCCCTGGAAGGCAATAGG
AGTCCCCCAGTACCCACCGGGCTTGGTAGAAGCGGGGACAGCCGCTATAG
TAAGAAGCGTTTGGCAGCATCACCGTCAAGATCAAGACtaagaagaagat
ggcggcAGGACAGAATTATGTATTTTAAACGcagccctttccatcccGTC
GTACTGACtgcgcctctcctcctccttagCCTACTGTCGTCGTTTTGTGG
TCGAGCCTACTCATTTGTCTTGCGTGAAAGTGTTCCATGCAATCGTCCTT
TATTCCGTCTGCCACACCGTGGGGAGAGAAGtaccctttcccccttgata
ccttcctcctctcctcctacTCTACTCTATGCGGCTGCACCCCGTAAACG
TAGCAAGATTAAGataggggaggcggagatgtcttttttcttcgacgagg
aggaagaagatgagataggagaagaggagggatggtcCCAGGCTGCATGG
CAGGAGGGcacggaagaggacggagcagagggagggagggagggagggag
agagggggagggaggacgagggaggcgtctGGCACGAAGCACGGCTGCCG
AGATCATGCAAGCGAAGATCGACGACCCTTACTACCAGTACCGGGACCGA
CGCATGTTTAaaatgggggaggacgagcggGCGTATTACGACAGCTTTGT
TCTCACGCTGTCTCTCTTCGCCTACTCCTCAGGATCAATGCGTACAAgcc
cccgttcccctcctccccttcctcctccccttcctccccccccctcctcc
acctccccttcctcctccgtgccctcCAACCTCATCGTGGGCTCCGGAAC
AGAGCTGTACCCTGGCCGCTCAGCGGGCATGTCTCCCGCGGTCTTGGAgg
cgatctcctccttccttgtcgaaggaggggaggagcccttgctcttgacg
gaaagagaggagatgggaggaagtggaggggggggaaggttcGGGGtcgg
gcaggggggaaaagaggaagcgaaggagaaggaacgggtGCGGTGGTTGT
CGGACGAAGCCGCGGAGGGCAATGCTCgtggggcggtggaggagcgggag
gaaggggaacgccTGTTTAGCAGCGAATGGTACGCTGGGGAAATGCGACG
ACGGAACGACCAGGGGAAGTACTCCTTGGCACTGACGTACTGGGAGCGGT
TGCTGCGGGAAGGGATTCGCCCGTGCCCGGCGGCCTATACGCAGGCGCTC
CGGGCGTGTCGTTTTACCGGCGAGATGGAGCTGGCATTGGAGCTGTAGAT
GAAAGAAGGACGGGATGGCTGTGGCCATCCGCCCCTGGAAGGCAATAGGA
GTCCCCCAGTACCCACCGGGCTTGGTAGAAGCGGGGACAGCCGCTATAGT
AAGAAGCGTTTGGCAGCATCACCGTCAAGATCAAGACtaagaagaagatg
gcggcAGGACAGAATTATGTATTTTAAACGcagccctttccatcccGTCG
TACTGACtgcgcctctcctcctccttagCCTACTGTCGTCGTTTTGTGGT
CGAGCCTACTCATTTGTCTTGCGTGAAAGTGTTCCATGCAATCGTCCTTT
ATTCCGTCTGCCACACCGTGGGGAGAGAAGtaccctttcccccttgatac
cttcctcctctcctcctacTCTACTCTATGCGGCTGCACCCCGTAAACGT
AGCAAGATTAAGataggggaggcggagatgtcttttttcttcgacgagga
ggaagaagatgagataggagaagaggagggatggtcCCAGGCTGCATGGC
AGGAGGGcacggaagaggacggagcagagggagggagggagggagggaga
gagggggagggaggacgagggaggcgtctGGCACGAAGCACGGCTGCCGA
GATCATGCAAGCGAAGATCGACGACCCTTACTACCAGTACCGGGACCGAC
GCATGTTTAaaatgggggaggacgagcggGCGTATTACGACAGCTTTGTT
CTCACGCTGTCTCTCTTCGCCTACTCCTCAGGATCAATGCGTACAAgccc
ccgttcccctcctccccttcctcctccccttcctccccccccctcctcca
cctccccttcctcctccgtgccctcCAACCTCATCGTGGGCTCCGGAACA
GAGCTGTACCCTGGCCGCTCAGCGGGCATGTCTCCCGCGGTCTTGGAggc
gatctcctccttccttgtcgaaggaggggaggagcccttgctcttgacgg
aaagagaggagatgggaggaagtggaggggggggaaggttcGGGGtcggg
caggggggaaaagaggaagcgaaggagaaggaacgggtGCGGTGGTTGTC
GGACGAAGCCGCGGAGGGCAATGCTCgtggggcggtggaggagcgggagg
aaggggaacgccTGTTTAGCAGCGAATGGTACGCTGGGGAAATGCGACGA
CGGAACGACCAGGGGAAGTACTCCTTGGCACTGACGTACTGGGAGCGGTT
GCTGCGGGAAGGGATTCGCCCGTGCCCGGCGGCCTATACGCAGGCGCTCC
GGGCGTGTCGTTTTACCGGCGAGATGGAGCTGGCATTGGAGCTGTAG back to top
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