EWM24443.1, cds6230 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24443.1 vs. NCBI_GenBank
Match: gi|585105892|gb|EWM24443.1| (hypothetical protein Naga_101370g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 342.043 bits (876), Expect = 4.644e-119 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 Query: 1 MMRQIQDRLNNAAQTLKKPQKVIGKQVEERPVWGIDAYTRRMIDYALTTVTDTSEGPLTESACTHFIEKKLLPAINIQPADKAHDMREALISMQASPLASPADKAACTRVMRAIAHLGQVGIPLLPPFLHSLPLSLLKSHLPALPLPFHSYPGHPLHLARKLALLRPS 168 MMRQIQDRLNNAAQTLKKPQKVIGKQVEERPVWGIDAYTRRMIDYALTTVTDTSEGPLTESACTHFIEKKLLPAINIQPADKAHDMREALISMQASPLASPADKAACTRVMRAIAHLGQVGIPLLPPFLHSLPLSLLKSHLPALPLPFHSYPGHPLHLARKLALLRPS Sbjct: 1 MMRQIQDRLNNAAQTLKKPQKVIGKQVEERPVWGIDAYTRRMIDYALTTVTDTSEGPLTESACTHFIEKKLLPAINIQPADKAHDMREALISMQASPLASPADKAACTRVMRAIAHLGQVGIPLLPPFLHSLPLSLLKSHLPALPLPFHSYPGHPLHLARKLALLRPS 168
BLAST of EWM24443.1 vs. NCBI_GenBank
Match: gi|219116062|ref|XP_002178826.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409593|gb|EEC49524.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 58.9214 bits (141), Expect = 4.127e-7 Identity = 41/98 (41.84%), Postives = 48/98 (48.98%), Query Frame = 0 Query: 6 QDRLNNAAQTLKKPQKVIGKQVEERPVWGIDAYTRRMIDYALTTVTDTSEGPLTESACTHFIEKKLLPAINIQPADKAHDMREALISMQASPLASPAD 103 Q R N KK +V+ E+PVWG+D YTRR I L T D P T HFIEK LLPAIN P D AH + A ++ P S D Sbjct: 683 QHRANGVCLDEKKSPEVV-----EQPVWGMDCYTRRNIASCLETDFD----PAT---ALHFIEKWLLPAINACPIDLAHKISNAARILEGLPFESMED 768
BLAST of EWM24443.1 vs. NCBI_GenBank
Match: gi|1210515711|dbj|GAX25234.1| (hypothetical protein FisN_5Lh316 [Fistulifera solaris]) HSP 1 Score: 58.151 bits (139), Expect = 8.127e-7 Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 0 Query: 3 RQIQDRLNNAAQTLKKPQKVIGKQVEERPVWGIDAYTRRMIDYALTTVTDTSEGPLTESACTHFIEKKLLPAINIQPADKAHDMREALISMQASPLASPADKAA 106 R+ + +N+ A + + ++ E+PVWGID YTRR I L D P T F+EK LLPAIN P + A D+R A ++ PL D+ + Sbjct: 685 RENHESMNDGATKDESLESEAPPEIVEQPVWGIDCYTRRNITACLQIEFD----PRTS---LQFVEKWLLPAINACPVEYAQDIRNAAKLLEGLPLNDENDECS 781 The following BLAST results are available for this feature:
BLAST of EWM24443.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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