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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100512g1.9604.mrna |
| Orig protein id | gnl|cribi|Naga_100512g1.9604 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:24475..26632 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6229 ID=rna6229|Name=rna6229|organism=Nannochloropsis gaditana|type=mRNA|length=1441bp
CAGGTGGGCGGAGCTGATGGACATGTGCGACCAGGCGGCTGCGACAAGCA
GGCATCCGTGGGGGCGGAAGCCGTCCTGAAGGAGCGGGGGGAGGAGGAGG
AGGAGACGGACAGGCGGGTGCAGGAGGTGGAGCGCATGGAGAAAGAGAGG
AGGCTGCAGGCGGCCATGCCGATGCTGCAGACGGTTGAGGCCTGGGAGGA
GGCGAGGATGGAGGGCGCGAAGGAGGTGGTGGAGATCACGCCCAGGCTCC
CGCGAAAACCTACCGCTCGTGCGTCGGAGGGGAAGATGAAGGAGAAAAAG
AAGGACGGAGCGGGCTTCAAGGATGAAGAGGGGCTGAGGCAGGAAGAGGA
GAAGGAGGGCGTAGAGGCGAAGGAGGTGAAGGAGGAGGAGGAGGAGGAGG
AGGAAGAAGAAGAAGAGGAAGAGTACGTCCCCATCGACGCCATGTTCCGG
GACGAAGTGGACGTGACGGCGGCCGATGGAACGAGTATGCGCGGGTATCT
AGTCTCCTCCAAGATGGCGCAGAAATTCTGGAGGCGGGAAGAGCGGCCCG
TGGTGCTTCTGCTCGCGGATGAGCGAGGCTGGCGCAGCGTCCAAACCCGG
AAGCTGGCGGACCACATGTCCTTCCTGAGCAACCATGTCTTCTTCGTCCC
AGACCTCTACCGCGGCCAGGTCTTCAAGAAGGGGCAGTCCAAGGAAGCGT
GGCGGGCGGCGCATCCCCCCATTCGCCTCCTACAAGACGCGAGGAGCGCG
ATGGAGAGCCTGGTCAGGAACTACAACGCCACGGCGACAGGCATCGTTGG
CTTCGGTGTTGGGGGCGGGCAAGCTCTCTCTGCTGTGGCCAGCGGCTTTA
TCAAGACCCATGCCGTCGTTGCTATGTGCCCTGTGGGCTATGACGCGCCC
AAGGTAGCGGAAGCGCTGAAGTCCACCCCTGCTCTGGTCATCTTTCCAGG
GCAGGACAATCCCGAGGCGCCATTGCAAAATGCACTGACCCTGATGGATG
GTTTTGCCTCGCACAAGGCCTTGCCGTACATGGTGAGGGTCTTCAAAGAT
TGCCACTTGCATTTTCTTACACGACCTGCACCAAACGAGGAGTCGGCCGC
TGAGGATGCGATCATGCTGGCGACAAGCTGGTTGGAAATTCAGCTCCGGA
GGGGGAAGGCAAAGATGATACGAGACTCTCGCATCCTCTGATCAACAAGA
CGGGGGAAAAAGCAAAAGGATGAGCAAGGCCATAATGTATGTAGTCGACC
AATGCATAATGACATTTATATATACTAGTGACATAATTGGGAGGAGCAAG
AACGTAAAAGCATAAGACATGAAAAATATGAATGCGTCGTATGTTTCTTA
CGGCTTTATTTGCTTCTTTCTCTGTCCCCGCGAAACGATTGCCCTTGCAA
AGTATGCACGCACCTGCGATAAAAGATACTCGACTTGATCT back to topprotein sequence of rna6229 >rna6229-protein ID=rna6229-protein|Name=rna6229|organism=Nannochloropsis gaditana|type=polypeptide|length=262bp
MRSKYSYLPVAVPIAGWLLAMMVIFVVHFISSWRRRKHLVGNLPKIFLWI
DPRSFLATAFRQKWNRRTFDRLILEEFQRRNYPPVIAICGPIPWVAPIFA
SNDATLIAEMLLLGNKTLMKKAGIKEEPPLEPFNQAVFSTTRRVLHTRMK
EWEQQSGLMVRSRTRRLAQYFTKRSTSSSFLSEQQHSEVDQENGHISSPV
EVLCLPPSPPHSLPPSLLSFHLPPLPPTLPPFLPSFLSRPPRALLYPING
GVSFPSRSGTRH back to topmRNA from alignment at CM002468.1:24475..26632- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6229 ID=rna6229|Name=rna6229|organism=Nannochloropsis gaditana|type=mRNA|length=2158bp|location=Sequence derived from alignment at CM002468.1:24475..26632- (Nannochloropsis gaditana)
TCATCCAGCATTCCTGCTTGCACATGACAACTCCATCAACAGGAAGGTGG
CGCGTGCCTTCACGTGTCCCGCCACTTCAGGTACACATCCTTTCGCCTTC
GCATGGAATCACCGGTAGATTGCGTGCTAATTGCGGCTTTTGCCCACACA
AAGACGAGCGGCCTTCTGTGTTGATTATCCCTCTTCACCTCCCCTATCAA
AGACGTGAAAAGATTCGACTATCCACTTAGCTGGCCCCCTGCTTCCTCCA
AAATTCTCTAGAAACCCCGTGTAGGCATGAATCAGTCTTCTTAATGCTGT
TTGAAGACATGGGTGGAAGAGACATGAAGTAAATAGGTACATTGGACATG
AAGTTCAAGCGCATCTTTTTCATCACCCCGTCCATCATGCTGCCTCGCTA
GCATACCTCAACAACGTCTTCTGACCCACAACCAGCGTCCTCACTCCAAT
AATTTGCATTCACACCGATACTTGTATAACAGGATGAGGTCAAAATATTC
TTATCTGCCCGTGGCAGTGCCCATTGCGGGTTGGTTACTCGCAATGATGG
TAATTTTTGTGGTCCATTTTATCTCCTCATGGCGGCGGCGTAAACACCTT
GTTGGGAACCTACCGAAGGTAAATGTGATTTCGAGGATGCGACAACAAAT
GTTGGGGGGACAAGTGCAAGTACACGCTCAGGGGGAAAATGACCGTGGGC
GGGAAAGGATCCAATATGGTTGTATCGGTACTTTAGGGTTAAATTGGAGT
CCAATTTCTTTGTTGCCCTTTTTCATTGTTTGAAACCTTCTCCAGATATT
CTTGTGGATCGATCCTAGATCCTTCCTGGCCACCGCATTTCGGCAAAAAT
GGAATCGGCGTACATTTGACCGGTATGGAGGGAGTAGCGGGAGGGAGGGA
AGAAGGACGGAGGAAGATGAGGAGGAGCAAGGAGCTTATCGGTGGCTTGT
TTCCGTCGGCCTGCACGACGCACCGTGGCAAGGAAGCCTGTTATTGACTT
GATCTCCTTTCCCTCCTTTTCTTAAATTTCTACCCTGCTTATTAGCCTTA
TTCTTGAGGAGTTTCAGAGACGGAACTATCCCCCCGTCATCGCGATTTGT
GGGCCCATCCCGTGGGTGGCGCCAATTTTCGCCTCGAACGACGCCACCCT
GATAGCGGAAATGCTCCTGCTCGGCAACAAGGTAAGAGCTTGGGGCTCCT
CTCCCTGCCTCCAGCATGGCTGCCTGGTTTTGCCTCGGACCTCTCCTTTC
TCTCCCAGAGGACTTATCGGTGACCTGGGCGCCTTCTCCCTCCTCTCCCT
TCCTCGCTTCCTCCCTCCAGACGCTGATGAAGAAGGCAGGCATCAAGGAG
GAGCCTCCCCTCGAGCCCTTCAACCAAGCAGTCTTCAGCACTACCCGTCG
AGTTCTTCATACCCGGATGAAGGAATGGGAGCAACAGAGCGGCCTCATGG
TTCGGAGTCGAACACGGCGTCTCGCCCAGTACGTCCTCCCTCCCGCCCTA
CCTCCCGCCCTCCCCCCCTTCCCTCCCTCGTTTCACTCCTCGCAGTGGAT
CTCATGTGCCGATGAACCGTCTATCGCATAAGGCTCGATCTTTCTTCCTG
AATGGCGCGGCTCTTCCCCCTCCCTTCCCTCTCTTTCCTCCTTATGTACC
TCCTGTCCTTCTCAGGTACTTTACCAAGCGTTCCACGTCCAGCTCCTTCC
TGTCAGAGCAGCAACATTCGGAGGTCGACCAAGAAAATGGGCACATCAGC
AGCCCGGTGGAGGTACTTTGCCTCCCTCCCTCCCCTCCTCACTCACTCCC
TCCCTCCCTTCTTTCCTTCCATCTTCCCCCCCTTCCTCCCACCCTTCCTC
CCTTTCTCCCTTCTTTTCTCTCTCGCCCCCCTCGAGCCCTCCTTTATCCC
ATCAACGGGGGCGTGTCTTTCCCCTCTAGGTCGGGTACAAGGCATTGATC
CCAGAAGGAGCCCAATCCTCGTCCCTCGTCCAACCTTGCACCCTTTCTTC
CCGTCCTCCTTTTCTCCCTCCTTCCCACCCTCGCTCCCTCCCTCCCTCCC
TCTTTCTTTACTCCCCTCGCGTCTCCGCACCCCTTAGCCCTGCGAGGCCC
ATACTTTGCGAGAGGAGTCCAGTCGTTCCTACTCCCAGGGCGAGGAGGGA
GGGAGGGA back to topCoding sequence (CDS) from alignment at CM002468.1:24475..26632- >rna6229 ID=rna6229|Name=rna6229|organism=Nannochloropsis gaditana|type=CDS|length=3945bp|location=Sequence derived from alignment at CM002468.1:24475..26632- (Nannochloropsis gaditana)
GTACTTTACCAAGCGTTCCACGTCCAGCTCCTTCCTGTCAGAGCAGCAAC
ATTCGGAGGTCGACCAAGAAAATGGGCACATCAGCAGCCCGGTGGAGGTA
CTTTGCCTCCCTCCCTCCCCTCCTCACTCACTCCCTCCCTCCCTTCTTTC
CTTCCATCTTCCCCCCCTTCCTCCCACCCTTCCTCCCTTTCTCCCTTCTT
TTCTCTCTCGCCCCCCTCGAGCCCTCCTTTATCCCATCAACGGGGGCGTG
TCTTTCCCCTCTAGGTCGGGTACAAGGCATTGAACGCTGATGAAGAAGGC
AGGCATCAAGGAGGAGCCTCCCCTCGAGCCCTTCAACCAAGCAGTCTTCA
GCACTACCCGTCGAGTTCTTCATACCCGGATGAAGGAATGGGAGCAACAG
AGCGGCCTCATGGTTCGGAGTCGAACACGGCGTCTCGCCCACCTTATTCT
TGAGGAGTTTCAGAGACGGAACTATCCCCCCGTCATCGCGATTTGTGGGC
CCATCCCGTGGGTGGCGCCAATTTTCGCCTCGAACGACGCCACCCTGATA
GCGGAAATGCTCCTGCTCGGCAACAAGATATTCTTGTGGATCGATCCTAG
ATCCTTCCTGGCCACCGCATTTCGGCAAAAATGGAATCGGCGTACATTTG
ACCGATGAGGTCAAAATATTCTTATCTGCCCGTGGCAGTGCCCATTGCGG
GTTGGTTACTCGCAATGATGGTAATTTTTGTGGTCCATTTTATCTCCTCA
TGGCGGCGGCGTAAACACCTTGTTGGGAACCTACCGAAGGTACTTTACCA
AGCGTTCCACGTCCAGCTCCTTCCTGTCAGAGCAGCAACATTCGGAGGTC
GACCAAGAAAATGGGCACATCAGCAGCCCGGTGGAGGTACTTTGCCTCCC
TCCCTCCCCTCCTCACTCACTCCCTCCCTCCCTTCTTTCCTTCCATCTTC
CCCCCCTTCCTCCCACCCTTCCTCCCTTTCTCCCTTCTTTTCTCTCTCGC
CCCCCTCGAGCCCTCCTTTATCCCATCAACGGGGGCGTGTCTTTCCCCTC
TAGGTCGGGTACAAGGCATTGAACGCTGATGAAGAAGGCAGGCATCAAGG
AGGAGCCTCCCCTCGAGCCCTTCAACCAAGCAGTCTTCAGCACTACCCGT
CGAGTTCTTCATACCCGGATGAAGGAATGGGAGCAACAGAGCGGCCTCAT
GGTTCGGAGTCGAACACGGCGTCTCGCCCACCTTATTCTTGAGGAGTTTC
AGAGACGGAACTATCCCCCCGTCATCGCGATTTGTGGGCCCATCCCGTGG
GTGGCGCCAATTTTCGCCTCGAACGACGCCACCCTGATAGCGGAAATGCT
CCTGCTCGGCAACAAGATATTCTTGTGGATCGATCCTAGATCCTTCCTGG
CCACCGCATTTCGGCAAAAATGGAATCGGCGTACATTTGACCGATGAGGT
CAAAATATTCTTATCTGCCCGTGGCAGTGCCCATTGCGGGTTGGTTACTC
GCAATGATGGTAATTTTTGTGGTCCATTTTATCTCCTCATGGCGGCGGCG
TAAACACCTTGTTGGGAACCTACCGAAGGTACTTTACCAAGCGTTCCACG
TCCAGCTCCTTCCTGTCAGAGCAGCAACATTCGGAGGTCGACCAAGAAAA
TGGGCACATCAGCAGCCCGGTGGAGGTACTTTGCCTCCCTCCCTCCCCTC
CTCACTCACTCCCTCCCTCCCTTCTTTCCTTCCATCTTCCCCCCCTTCCT
CCCACCCTTCCTCCCTTTCTCCCTTCTTTTCTCTCTCGCCCCCCTCGAGC
CCTCCTTTATCCCATCAACGGGGGCGTGTCTTTCCCCTCTAGGTCGGGTA
CAAGGCATTGAACGCTGATGAAGAAGGCAGGCATCAAGGAGGAGCCTCCC
CTCGAGCCCTTCAACCAAGCAGTCTTCAGCACTACCCGTCGAGTTCTTCA
TACCCGGATGAAGGAATGGGAGCAACAGAGCGGCCTCATGGTTCGGAGTC
GAACACGGCGTCTCGCCCACCTTATTCTTGAGGAGTTTCAGAGACGGAAC
TATCCCCCCGTCATCGCGATTTGTGGGCCCATCCCGTGGGTGGCGCCAAT
TTTCGCCTCGAACGACGCCACCCTGATAGCGGAAATGCTCCTGCTCGGCA
ACAAGATATTCTTGTGGATCGATCCTAGATCCTTCCTGGCCACCGCATTT
CGGCAAAAATGGAATCGGCGTACATTTGACCGATGAGGTCAAAATATTCT
TATCTGCCCGTGGCAGTGCCCATTGCGGGTTGGTTACTCGCAATGATGGT
AATTTTTGTGGTCCATTTTATCTCCTCATGGCGGCGGCGTAAACACCTTG
TTGGGAACCTACCGAAGGTACTTTACCAAGCGTTCCACGTCCAGCTCCTT
CCTGTCAGAGCAGCAACATTCGGAGGTCGACCAAGAAAATGGGCACATCA
GCAGCCCGGTGGAGGTACTTTGCCTCCCTCCCTCCCCTCCTCACTCACTC
CCTCCCTCCCTTCTTTCCTTCCATCTTCCCCCCCTTCCTCCCACCCTTCC
TCCCTTTCTCCCTTCTTTTCTCTCTCGCCCCCCTCGAGCCCTCCTTTATC
CCATCAACGGGGGCGTGTCTTTCCCCTCTAGGTCGGGTACAAGGCATTGA
ACGCTGATGAAGAAGGCAGGCATCAAGGAGGAGCCTCCCCTCGAGCCCTT
CAACCAAGCAGTCTTCAGCACTACCCGTCGAGTTCTTCATACCCGGATGA
AGGAATGGGAGCAACAGAGCGGCCTCATGGTTCGGAGTCGAACACGGCGT
CTCGCCCACCTTATTCTTGAGGAGTTTCAGAGACGGAACTATCCCCCCGT
CATCGCGATTTGTGGGCCCATCCCGTGGGTGGCGCCAATTTTCGCCTCGA
ACGACGCCACCCTGATAGCGGAAATGCTCCTGCTCGGCAACAAGATATTC
TTGTGGATCGATCCTAGATCCTTCCTGGCCACCGCATTTCGGCAAAAATG
GAATCGGCGTACATTTGACCGATGAGGTCAAAATATTCTTATCTGCCCGT
GGCAGTGCCCATTGCGGGTTGGTTACTCGCAATGATGGTAATTTTTGTGG
TCCATTTTATCTCCTCATGGCGGCGGCGTAAACACCTTGTTGGGAACCTA
CCGAAGGTACTTTACCAAGCGTTCCACGTCCAGCTCCTTCCTGTCAGAGC
AGCAACATTCGGAGGTCGACCAAGAAAATGGGCACATCAGCAGCCCGGTG
GAGGTACTTTGCCTCCCTCCCTCCCCTCCTCACTCACTCCCTCCCTCCCT
TCTTTCCTTCCATCTTCCCCCCCTTCCTCCCACCCTTCCTCCCTTTCTCC
CTTCTTTTCTCTCTCGCCCCCCTCGAGCCCTCCTTTATCCCATCAACGGG
GGCGTGTCTTTCCCCTCTAGGTCGGGTACAAGGCATTGAACGCTGATGAA
GAAGGCAGGCATCAAGGAGGAGCCTCCCCTCGAGCCCTTCAACCAAGCAG
TCTTCAGCACTACCCGTCGAGTTCTTCATACCCGGATGAAGGAATGGGAG
CAACAGAGCGGCCTCATGGTTCGGAGTCGAACACGGCGTCTCGCCCACCT
TATTCTTGAGGAGTTTCAGAGACGGAACTATCCCCCCGTCATCGCGATTT
GTGGGCCCATCCCGTGGGTGGCGCCAATTTTCGCCTCGAACGACGCCACC
CTGATAGCGGAAATGCTCCTGCTCGGCAACAAGATATTCTTGTGGATCGA
TCCTAGATCCTTCCTGGCCACCGCATTTCGGCAAAAATGGAATCGGCGTA
CATTTGACCGATGAGGTCAAAATATTCTTATCTGCCCGTGGCAGTGCCCA
TTGCGGGTTGGTTACTCGCAATGATGGTAATTTTTGTGGTCCATTTTATC
TCCTCATGGCGGCGGCGTAAACACCTTGTTGGGAACCTACCGAAG back to top
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