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Properties
| Property Name | Value |
|---|
| Product | HAD-like domain protein |
| Orig transcript id | gnl|cribi|Naga_100301g5.10492.mrna |
| Orig protein id | gnl|cribi|Naga_100301g5.10492 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:4950..7288 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6223 ID=rna6223|Name=rna6223|organism=Nannochloropsis gaditana|type=mRNA|length=961bp
ATGCATATTTTGGCCTGTTTTCAAATCCAGGTCAAGTTCTCAAGGACTAA
GACTACACCAGGTCTGGTGGTAAAGGTGAACCTGACTGACTTCACGCGAG
TAAGCGCCATCACAACGTCTGGAAATAATCTAGCATCAGCGCTTGAGAAG
GGAGACTTTGCGTATTTCGGGAGTGACTTTTTTCCTGGATCAGTGGTGAA
GGTAAACCTCACCGACTTCACTGAAGCCGACGTCCTACCTCTCGAGGATA
ACGAAGGCTCGCTGTTTTCGGCGGTGTTGAGTGGACAATTTGCGTATTTT
GGATGTTCCACTACTCCAGGTATCATCGTGAAGGTGAATTTGACCGACTT
CACCCGGGTCGAAAATCTCACGCTAAATTCCGATGAAAACACGTTGCAAA
CGGCGGTGTCAAAAGACGACTTTGCATATTTTGGGTAAGTCAAGTTTTAT
CAGTCCTTCACAATCGTCTGCGGGATCAATTTAAGCTAATGAGAACATGC
TCCACCAAATCGTCCACACAGAACTAATACTTCCCCTTCCAAAGTGATAA
GGGTTGCCATCTAGTCCTCCGGATGGAAGCTTACCCCTTGATGCCAATCC
CAGGAACAAACACGTGCATCCCGAGGAAACTTCCATCCGGAGACCCTGAT
TTCATATCCAGAAAGCCTTACAAGCAACCACTAAGACTATTCAATCATCA
GTAATATCATGATTGACTTCTATAAAAGTCGAAGGGAGAAGCATTATTCT
ATCAAACGCTTCTCATTATATAAGCCTCATCAAGAAAACAAGAAGTTTCC
GTGAATAAATCGTTTGGTAGTTCTCAAAACCCACCTCGAGGCGTGAACTG
CCTGTTTCTATCTCATCGAGATACTATGACATCAAAGTCGTAGGGTTAGG
GTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTAGGGTTAGGGT
TAGGGTTAGGG back to topprotein sequence of rna6223 >rna6223-protein ID=rna6223-protein|Name=rna6223|organism=Nannochloropsis gaditana|type=polypeptide|length=478bp
MLHFSSRLHNLHRVLGFCCMLESSSKHFLGSLVLAFLCCLMVETSPHDSS
IDAGAHIAELKHLAHCMAVRLLCLHRQHEKREKEQQQQEEGTHQGSFPPR
CVFSDLDGTLLHFGGNLLKESYEILPFDGAEKEALSIFKDIGRREMAGQP
STQHEEEHAAVSLGPLWGSAPPSQATCLHSSSELSADSQVPSPPASSSPP
APPCVGRTGSSAPAPRYVTLRYQPDGTTRTCIELPSLSSGPGYISVRTLE
LVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPN
ARLDLASDAHSEGHEGWDRTWKEAVGPLQGLWGLYEELKGEGWGVDGRDY
YTSFRVDTRGKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATAL
SRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVN
ADPRVETVTRPGILGSEEALERVLASLV back to topmRNA from alignment at CM002468.1:4950..7288+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6223 ID=rna6223|Name=rna6223|organism=Nannochloropsis gaditana|type=mRNA|length=2339bp|location=Sequence derived from alignment at CM002468.1:4950..7288+ (Nannochloropsis gaditana)
TCTGCTGTTGGCATTCCACACACAATCCTACCCGGAATTGACCCTTCTGG
CTTTAACAAGCCCAGGACAGATGCTCAAACATTTTGAATACCAAGAAATC
TAGTCTACCTTCCCTAGCAAATAGATGAATATCGAACCCCTCGACTCAAG
TTTATACTCAAACTTGATTGGGAGGTTAAATGAGGACTGTAGAAGTGTCA
GCGCCGTCGACGGCGAACAGAAAacccctcgtctccttagTGGCAATTGA
TGAGGAAAAGGATACTTGTTAGCTTGCTTTTTTGTTTAGTATTTATGATC
TCTGCTTTCGTCCTTCGTACAGTCGAAAGCTTCATGCCATCTCAAAATAT
TAGGCTAGAGCTGACTACGTATCTTCAGGGTGGAGCCTACCAACGCTTAC
GTGCACACCCATTGAAGTAAGAGAAAGCTTTTCTCATTGCGTGCTTTGTA
CAACTTCTTTTCCACCCGGCAATGCTGCATTTTTCTTCACGCCTGCACAA
CTTGCACAGGGTGCTGGGGTTCTGCTGCATGCTGGAATCTTCCAGCAAAC
ATTTCCTCGGCAGTCTTGTGCTCGCCTTCCTGTGTTGTCTCATGGTTGAG
ACATCCCCTCATGATTCTAGTATTGACGCCGGTGCTCACATAGCTGAACT
TAAGCATCTTGCACACTGTATGGCAGTTCGCCTTCTTTGTCTCCATCGTC
AGCATGaaaagcgggagaaggagcagcagcagcaggaggagggtacGCAC
CAGggctcttttccccctcgttgCGTCTTCAGCGACCTTGATGGTACGCT
ATTACACTTTGGTGGCAATTTATTGAAAGAAAGCTATGAAATTCTTCCGT
TTGATGGCGCCGAAAAAGAAGCACTGTCCATTTTCAAGGACATTGGTCGG
CGAGAGATGGCAGGTCAACCGAGCACCCAGCACGAGGAAGAGCAcgccgc
cgtctccctcggTCCCCTGTGGGGCTCGGCACCCCCTTCTCAAGCTACGT
GCTtacactcctcctccgagctTTCCGCGGATTCCCAggttccttcccca
cccgcttcctcttccccgccggcCCCACCTTGTGTAGGCCGTACGGGTTC
GtcagcccctgcccctcgatACGTGACCCTGAGATACCAGCCCGACGGCA
CAACTCGCACCTGCATCGAGCTCCCTTCCCTATCGTCAGGCCCTGGCTAT
ATCTCCGTCCGGACCTTGGAGCTGGTGCAGGCGATCCGGCGGGAGGGCTG
CCTCTTCGTCCTGCTCACCGGGGCGCGCAGCAGCACTTACCTGATGCGTC
GGCGCACAGGCCTGCCAGTGGTAGACTACGAATGTAtcgagggcggaggc
agacTCATTCACGACCCTAACGCCCGCCTGGACCTGGCGTCGGACGCACA
CAGCGAGGGGCATGAGGGCTGGGACCGcacgtggaaggaggccgtcgggC
CCCTCCAGGGGCTCTGGGGACTCTACGAGGAGctgaaaggagaagggtgg
ggCGTGGACGGGCGTGACTATTACACGAGTTTTCGGGTAGATACGAGGGG
CAAGATGGGGGAGCAGTGGGAGGGCGTCAAGAGTCGGTGAGGTGGCgcgg
gaagtggaggaggggaggaggagtcgaggGAGTGGAACAAGGAAGATTTG
ATTTATCTTCTTAGGGGTAGGCAAGGATAGAGAATATACTTTTCAACAGC
ATTTAAGGGGAGTGGTGTGCTTCAAGCAGGCACTTGTATTCGCCAACCTC
ACCGTTCGAttgccctctctcgcctTGTTCCACACTGCGGCAGGCTTCCT
GCTCTaggtctctcctcctccttcaacctgGGGAAAGCCGACATCTACCC
TCGTACGTCCGGCAAGGCGACTGCCCTTAGCCGACTgctccctcgccttt
ttctGCACCCTTCCCAGTGTGTAGTCTTGTTTGACGACGACAACGACCTG
GGTATGGCCGATGTCTGTGcgtccgggaggaggatcgcTGTCTCGATCAC
GCACCCATCCGTGCAAGCCTACGTGAATGCAGACCCTCGCGTTGAAACAG
TGACTAGGCCAGGGATCTTGGGCTCCGAGGAGGCCCTAGAGCGTGTGTTG
GCTTCGCTGGTGTAGCGGGTGGGCTCATTCGAGGCTTCTCCAGTCCGTGT
CGACTGATGTCGATGAACGCCCCTACGATTACTGCCTGGCCTGCAGAGCT
CTACGAGGCTGGTGTATTATTTTCTGCAGATGGGCAAGGCTGATTATTAC
GAGGACGTAGGATTGGAAAACTTTGGGGCAAAGAAAGtaaatattttttt
tgggaAGCAAAAGAATCTCAGAGCAATGTGCATTACGTG back to topCoding sequence (CDS) from alignment at CM002468.1:4950..7288+ >rna6223 ID=rna6223|Name=rna6223|organism=Nannochloropsis gaditana|type=CDS|length=2874bp|location=Sequence derived from alignment at CM002468.1:4950..7288+ (Nannochloropsis gaditana)
ATGCTGCATTTTTCTTCACGCCTGCACAACTTGCACAGGGTGCTGGGGTT
CTGCTGCATGCTGGAATCTTCCAGCAAACATTTCCTCGGCAGTCTTGTGC
TCGCCTTCCTGTGTTGTCTCATGGTTGAGACATCCCCTCATGATTCTAGT
ATTGACGCCGGTGCTCACATAGCTGAACTTAAGCATCTTGCACACTGTAT
GGCAGTTCGCCTTCTTTGTCTCCATCGTCAGCATGaaaagcgggagaagg
agcagcagcagcaggaggagggtacGCACCAGggctcttttccccctcgt
tgCGTCTTCAGCGACCTTGATGGTACGCTATTACACTTTGGTGGCAATTT
ATTGAAAGAAAGCTATGAAATTCTTCCGTTTGATGGCGCCGAAAAAGAAG
CACTGTCCATTTTCAAGGACATTGGTCGGCGAGAGATGGCAGGTCAACCG
AGCACCCAGCACGAGGAAGAGCAcgccgccgtctccctcggTCCCCTGTG
GGGCTCGGCACCCCCTTCTCAAGCTACGTGCTtacactcctcctccgagc
tTTCCGCGGATTCCCAggttccttccccacccgcttcctcttccccgccg
gcCCCACCTTGTGTAGGCCGTACGGGTTCGtcagcccctgcccctcgatA
CGTGACCCTGAGATACCAGCCCGACGGCACAACTCGCACCTGCATCGAGC
TCCCTTCCCTATCGTCAGGCCCTGGCTATATCTCCGTCCGGACCTTGGAG
CTGGTGCAGGCGATCCGGCGGGAGGGCTGCCTCTTCGTCCTGCTCACCGG
GGCGCGCAGCAGCACTTACCTGATGCGTCGGCGCACAGGCCTGCCAGTGG
TAGACTACGAATGTAtcgagggcggaggcagacTCATTCACGACCCTAAC
GCCCGCCTGGACCTGGCGTCGGACGCACACAGCGAGGGGCATGAGGGCTG
GGACCGcacgtggaaggaggccgtcgggCCCCTCCAGGGGCTCTGGGGAC
TCTACGAGGAGctgaaaggagaagggtggggCGTGGACGGGCGTGACTAT
TACACGAGTTTTCGGGTAGATACGAGGGGCAAGATGGGGGAGCAGTGGGA
GGGCGTCAAGAGTCGGCTTCCTGCTCTaggtctctcctcctccttcaacc
tgGGGAAAGCCGACATCTACCCTCGTACGTCCGGCAAGGCGACTGCCCTT
AGCCGACTgctccctcgcctttttctGCACCCTTCCCAGTGTGTAGTCTT
GTTTGACGACGACAACGACCTGGGTATGGCCGATGTCTGTGcgtccggga
ggaggatcgcTGTCTCGATCACGCACCCATCCGTGCAAGCCTACGTGAAT
GCAGACCCTCGCGTTGAAACAGTGACTAGGCCAGGGATCTTGGGCTCCGA
GGAGGCCCTAGAGCGTGTGTTGGCTTCGCTGGTGTAGATGCTGCATTTTT
CTTCACGCCTGCACAACTTGCACAGGGTGCTGGGGTTCTGCTGCATGCTG
GAATCTTCCAGCAAACATTTCCTCGGCAGTCTTGTGCTCGCCTTCCTGTG
TTGTCTCATGGTTGAGACATCCCCTCATGATTCTAGTATTGACGCCGGTG
CTCACATAGCTGAACTTAAGCATCTTGCACACTGTATGGCAGTTCGCCTT
CTTTGTCTCCATCGTCAGCATGaaaagcgggagaaggagcagcagcagca
ggaggagggtacGCACCAGggctcttttccccctcgttgCGTCTTCAGCG
ACCTTGATGGTACGCTATTACACTTTGGTGGCAATTTATTGAAAGAAAGC
TATGAAATTCTTCCGTTTGATGGCGCCGAAAAAGAAGCACTGTCCATTTT
CAAGGACATTGGTCGGCGAGAGATGGCAGGTCAACCGAGCACCCAGCACG
AGGAAGAGCAcgccgccgtctccctcggTCCCCTGTGGGGCTCGGCACCC
CCTTCTCAAGCTACGTGCTtacactcctcctccgagctTTCCGCGGATTC
CCAggttccttccccacccgcttcctcttccccgccggcCCCACCTTGTG
TAGGCCGTACGGGTTCGtcagcccctgcccctcgatACGTGACCCTGAGA
TACCAGCCCGACGGCACAACTCGCACCTGCATCGAGCTCCCTTCCCTATC
GTCAGGCCCTGGCTATATCTCCGTCCGGACCTTGGAGCTGGTGCAGGCGA
TCCGGCGGGAGGGCTGCCTCTTCGTCCTGCTCACCGGGGCGCGCAGCAGC
ACTTACCTGATGCGTCGGCGCACAGGCCTGCCAGTGGTAGACTACGAATG
TAtcgagggcggaggcagacTCATTCACGACCCTAACGCCCGCCTGGACC
TGGCGTCGGACGCACACAGCGAGGGGCATGAGGGCTGGGACCGcacgtgg
aaggaggccgtcgggCCCCTCCAGGGGCTCTGGGGACTCTACGAGGAGct
gaaaggagaagggtggggCGTGGACGGGCGTGACTATTACACGAGTTTTC
GGGTAGATACGAGGGGCAAGATGGGGGAGCAGTGGGAGGGCGTCAAGAGT
CGGCTTCCTGCTCTaggtctctcctcctccttcaacctgGGGAAAGCCGA
CATCTACCCTCGTACGTCCGGCAAGGCGACTGCCCTTAGCCGACTgctcc
ctcgcctttttctGCACCCTTCCCAGTGTGTAGTCTTGTTTGACGACGAC
AACGACCTGGGTATGGCCGATGTCTGTGcgtccgggaggaggatcgcTGT
CTCGATCACGCACCCATCCGTGCAAGCCTACGTGAATGCAGACCCTCGCG
TTGAAACAGTGACTAGGCCAGGGATCTTGGGCTCCGAGGAGGCCCTAGAG
CGTGTGTTGGCTTCGCTGGTGTAG back to top
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