EWM24462.1, cds6208 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|585105929|gb|EWM24462.1| (HAD-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 976.852 bits (2524), Expect = 0.000e+0 Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0 Query: 1 MLHFSSRLHNLHRVLGFCCMLESSSKHFLGSLVLAFLCCLMVETSPHDSSIDAGAHIAELKHLAHCMAVRLLCLHRQHEKREKEQQQQEEGTHQGSFPPRCVFSDLDGTLLHFGGNLLKESYEILPFDGAEKEALSIFKDIGRREMAGQPSTQHEEEHAAVSLGPLWGSAPPSQATCLHSSSELSADSQVPSPPASSSPPAPPCVGRTGSSAPAPRYVTLRYQPDGTTRTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQGLWGLYEELKGEGWGVDGRDYYTSFRVDTRGKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 478 MLHFSSRLHNLHRVLGFCCMLESSSKHFLGSLVLAFLCCLMVETSPHDSSIDAGAHIAELKHLAHCMAVRLLCLHRQHEKREKEQQQQEEGTHQGSFPPRCVFSDLDGTLLHFGGNLLKESYEILPFDGAEKEALSIFKDIGRREMAGQPSTQHEEEHAAVSLGPLWGSAPPSQATCLHSSSELSADSQVPSPPASSSPPAPPCVGRTGSSAPAPRYVTLRYQPDGTTRTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQGLWGLYEELKGEGWGVDGRDYYTSFRVDTRGKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV Sbjct: 1 MLHFSSRLHNLHRVLGFCCMLESSSKHFLGSLVLAFLCCLMVETSPHDSSIDAGAHIAELKHLAHCMAVRLLCLHRQHEKREKEQQQQEEGTHQGSFPPRCVFSDLDGTLLHFGGNLLKESYEILPFDGAEKEALSIFKDIGRREMAGQPSTQHEEEHAAVSLGPLWGSAPPSQATCLHSSSELSADSQVPSPPASSSPPAPPCVGRTGSSAPAPRYVTLRYQPDGTTRTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQGLWGLYEELKGEGWGVDGRDYYTSFRVDTRGKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 478
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|553184661|ref|XP_005854129.1| (sucrose-phosphate phosphatase, partial [Nannochloropsis gaditana CCMP526] >gi|422294931|gb|EKU22231.1| sucrose-phosphate phosphatase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 213.772 bits (543), Expect = 7.830e-65 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 Query: 373 LPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 478 LPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV Sbjct: 1 LPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 106
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|1189393543|gb|OSX80437.1| (hypothetical protein BU14_0052s0053 [Porphyra umbilicalis]) HSP 1 Score: 165.236 bits (417), Expect = 4.156e-43 Identity = 114/276 (41.30%), Postives = 137/276 (49.64%), Query Frame = 0 Query: 218 VTLRYQPDGTTRTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQG------------------LWGLYEELKGEGWGVDGRDYYTSFRVDTRGKMGEQWEGVKSRLPAL-GLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVL 474 VT+ Y G R C L SLSS Y+S T LVQ +R G LFV++TGARSSTY RR LP DYE E GGR++ A E W T++ VGP+ LW LY E+K GW VD RDYYTSFRVD G L G S SFNLGKADIYP SGKA A +L R L P+ V +FDDDNDL + ++ + R TH SV ++ E G+LG+EEAL V+ Sbjct: 38 VTIEYNQLGVQRECAVLGSLSSSTAYMSHETTRLVQTLRAAGVLFVIITGARSSTYARRRAA-LPAADYEFFENGGRML------------ASGELVPEWTATFEADVGPVDASVVPEGDAAPAPATRSGKLWDLYREMKEAGWKVDARDYYTSFRVDVAGTTAAGLNAAAFAAWDLRGFSCSFNLGKADIYPAGSGKAAAAREVLRRHGLRPAHAVTMFDDDNDLELGELAS--RSFLPGATHDSVLDALHRHDNWEMTNSRGVLGTEEALAAVM 298
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|546326663|ref|XP_005719009.1| (unnamed protein product [Chondrus crispus] >gi|507115656|emb|CDF39098.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 152.14 bits (383), Expect = 3.121e-39 Identity = 97/253 (38.34%), Postives = 131/253 (51.78%), Query Frame = 0 Query: 244 ISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQG-----------------LWGLYEELKGEGWGVDGRDYYTSFRVDTR---GKMGEQWEG-VKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLA 475 +S+RT L+ +R G +FV++TGARSSTY+ RR LP D+E E GGR + LD A W + VGP+ LW LY +L +GW +D RDY T+ RVD + GK Q++ V++ P L+SSFNLGK DIYP+ SGKA A +L L + + LFDDDNDL + + GR +THPSV + P + G+LG+E ALE +LA Sbjct: 1 MSLRTSHLIAELRAAGVVFVIITGARSSTYIGRRPL-LPQADFEFFENGGRKL--AAGVLDPA----------WTDRFVAEVGPILDRSSLLPDLPPVEVRDGTLWQLYRQLAHDGWNIDARDYMTNIRVDVKKSEGKTASQFQAIVENECPKRALASSFNLGKGDIYPQGSGKANAARHILQTLGIDSKDAIALFDDDNDLELGALV--GRSFLPGVTHPSVLEALKHQPTWTLTEQRGVLGTESALETILA 238
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|1004146981|gb|KXZ54955.1| (hypothetical protein GPECTOR_3g123 [Gonium pectorale]) HSP 1 Score: 141.354 bits (355), Expect = 5.652e-35 Identity = 98/249 (39.36%), Postives = 127/249 (51.00%), Query Frame = 0 Query: 242 GYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQG-----------LWGLYEELKGEGWGVDGRDYYTSFRVDTRG-KMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 478 G IS TL V +R GCLFV+++GAR ST LMR LP D E GGR+++ P + L A +E E W + A GP+ LW LY +L+ +GW +D Y TSFRV RG K EQ + + P+ GLS SFNLG AD YP TSGK A L+ R C L DDDNDL +A G+ SIT SV+ +A P V +P G+ A E +L +++ Sbjct: 26 GVISAATLHQVAQLRSRGCLFVVISGARLSTLLMRLPY-LPAADAYVCENGGRILY-PGSDLPTACPV-TEDKE-WRASHDHAAGPITQDAVPPAEREGPLWDLYRKLQADGWSLDANGYTTSFRVHARGGKTMEQLRALLADKPS-GLSCSFNLGAADFYPSTSGKVQAARHLMSRFAAAAPDCSFLCDDDNDLELA--AEVGKAFLPSITSDSVRQAADARPEHFVVAKPAGQGTTAATEEMLLAVM 267
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|818250355|gb|KKP37121.1| (hypothetical protein UR27_C0009G0029 [Candidatus Peregrinibacteria bacterium GW2011_GWA2_33_10] >gi|818254669|gb|KKP41295.1| hypothetical protein UR30_C0001G0142 [Candidatus Peregrinibacteria bacterium GW2011_GWC2_33_13] >gi|1083931336|gb|OGJ49115.1| hypothetical protein A2229_01880 [Candidatus Peregrinibacteria bacterium RIFOXYA2_FULL_33_7] >gi|1083935396|gb|OGJ52758.1| hypothetical protein A2483_04765 [Candidatus Peregrinibacteria bacterium RIFOXYC2_FULL_33_13]) HSP 1 Score: 136.732 bits (343), Expect = 4.024e-33 Identity = 84/262 (32.06%), Postives = 131/262 (50.00%), Query Frame = 0 Query: 229 RTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQG----------LWGLYEELKGEGWGVDGRDYYTSFRVDTR---GKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASL 477 R C L S +SG Y+S++T+ L++ ++++G +FV+++G R ST+ R LP D +E GGR+ N LD + W++ + E G ++ LW Y EL G GW +D Y +FR+ + KM E + ++ +P L ++++ NLGKAD YP SGK A+ +L + + + DDDNDL M A G+ IT SV+ + GILG+EE LE++L L Sbjct: 47 RVCNILKSATSGNAYVSLKTINLIEQLKQKGVIFVMISGVRKSTFF-ERIPFLPKADVWIMENGGRIY--VNEILD----------KKWNQRFFEVTGDIETDLPPEKRIGILWDFYRELIGRGWVIDTNSYSANFRISLKQNPDKMQEDIDKLQKEVPPL-ITTAHNLGKADFYPEISGKGNAVKYILEKFNIRIEESAACMDDDNDLPMT--SAVGKVYLPGITSESVREALKRHSDWVVSKNKGILGTEEVLEKILNEL 292
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|302834030|ref|XP_002948578.1| (hypothetical protein VOLCADRAFT_103907 [Volvox carteri f. nagariensis] >gi|300266265|gb|EFJ50453.1| hypothetical protein VOLCADRAFT_103907 [Volvox carteri f. nagariensis]) HSP 1 Score: 134.806 bits (338), Expect = 1.945e-32 Identity = 102/274 (37.23%), Postives = 132/274 (48.18%), Query Frame = 0 Query: 219 TLRYQPDGTTRTCIEL---PSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQ-----------GLWGLYEELKGEGWGVDGRDYYTSFRVDTRG-KMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTR---PGILGSEEALERVL 474 T+ ++P R L PS S G IS TL LV +R G LFV++TGAR ST LMR LP D E GGR+++ P + L A + W + + VG ++ LW LY L EGW +D Y TSFRV RG K + G+ + + GLS SFNLG AD YP TSGK A L+ R + C L DDDNDL +A GR SI+ SV+ A P V + G+ +EE L+ V+ Sbjct: 15 TIMHEPKTIDRDAAVLLTPPSASGRQGVISAATLHLVAQLRSRGALFVVITGARLSTLLMRLPY-LPAADAYVCENGGRILY-PGSDLPTACPITEDAE--WRSSHDQVVGSVEQDAVQPKDRTGSLWELYRRLLAEGWYLDANGYTTSFRVHARGDKTMDDLRGLAA-FRSEGLSCSFNLGAADFYPATSGKVMAARHLMVRFGVAAKDCCFLCDDDNDLELAR--EVGRAFLPSISSDSVRQAAEARPEHFVVAKCEGQGVAATEEMLQAVM 281
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|544209258|ref|XP_005535032.1| (hypothetical protein CYME_CMA027C [Cyanidioschyzon merolae strain 10D] >gi|449015344|dbj|BAM78746.1| hypothetical protein CYME_CMA027C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 130.183 bits (326), Expect = 4.643e-30 Identity = 101/299 (33.78%), Postives = 133/299 (44.48%), Query Frame = 0 Query: 231 CIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIH--DPNARLDLASDAHSEGHEG---W---------------------DRTWKEAVGPLQGLWGLYEELKGEGWGVDGRDYYTSFRVDTRGKM---GEQWE--------------------------GVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVL 474 C LP+L+ G GY+S R +ELV +R G LLTGARSST L RR LPVVD E GGRL+ D D+ E G W D + E P+ LW EL GW +D R+YYT+FRVD + QWE +++R+ LGL ++ NLGK D++P SGK +L R Q V + DDDND+ +A+ C S S++H V+A + P + T G L +EEAL VL Sbjct: 61 CRVLPTLTKGCGYLSERVVELVDTLRVHGVFVALLTGARSST-LYRRLPLLPVVDAIAWENGGRLMWRADTAYVEDVTWARRLEPWTGPHPWCAADECVVPREQDSPYPSTAVDGSSDEHPDPVAPLWQAASELATAGWMLDTREYYTAFRVDIASSLRSRNVQWERPASSTAATSAVNGVVTEQHMQAATADIRARVTPLGLQTASNLGKLDVFPGCSGKRNVAEYILARTGCTRDQAVAMIDDDNDIELAEWCGSA--YLPSVSHEHVRAVIQEHPEWKLSTFSGPLATEEALTAVL 356
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|922853265|gb|KOO21892.1| (hypothetical protein Ctob_000273 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 125.561 bits (314), Expect = 4.408e-27 Identity = 90/270 (33.33%), Postives = 128/270 (47.41%), Query Frame = 0 Query: 224 PDGTTRTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQG----------LWGLYEELKGE--GWGVDGRDYYTSFRVDTRGKMGEQW---EGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 478 P G R C LPS + G G +S RT+EL+ +R G +FV++T AR ST L R LP D E G R+ LD E W + ++E GPL+ LW L+ + E G D R YY FRVDT+G + +++ LP G++ + NLGK D +P SGK A++ L + + LFDDDNDL MA+ CA ++ S A + + V + G+ EE LE++L +V Sbjct: 384 PTGEQRVCRLLPSSTMGDGLVSERTVELIAELRARGVIFVIVTAARKST-LFEREPLLPPSDAYVCETGSRIYRGGLDALD----------EAWAKGFEEVSGPLERELDVSERPEPLWQLFRRFQAEVPGLKCDARSYYGCFRVDTQGNTAVEAALRACIEAHLPH-GITWAMNLGKYDFFPSASGKGNAVAYLQAVYGVRADESCCLFDDDNDLPMAERCAVHYLPGLTSQSVSRAAAEHPEWHVASKAGQGVFAIEECLEQLLERVV 641
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|159472737|ref|XP_001694501.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158276725|gb|EDP02496.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 115.161 bits (287), Expect = 7.229e-26 Identity = 91/229 (39.74%), Postives = 114/229 (49.78%), Query Frame = 0 Query: 264 LLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLA-----------SDAHSEGHEGWDRTW-KEAVGPLQGLWGLYEELKGEGWGVDGRDYYTSFRVDT--RGKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRP---GILGSEEALERVLA 475 +++GAR ST LMR LP+ D E GGR+++ P + L A S H+ G D T +E GPL W LY +L EGW +D Y TSFRV GK E+ V + PA GL+SSFNLG AD YP TSGK A L+ R C L DDDNDL +A GR SIT SV+ A P V + G++ +EE L V+A Sbjct: 1 VISGARLSTLLMRLPY-LPLADAYVCENGGRILY-PGSDLPTACPVTEDKEWRASHDHAAGSIEQDATPPQERKGPL---WDLYRKLHSEGWSLDANGYTTSFRVHAGRNGKSLEELRAVVAAAPA-GLASSFNLGAADFYPDTSGKVMAARHLMARFGAPAPACSFLCDDDNDLQLA--AEVGRAFLPSITSDSVRVAAEARPEHFVVAKTAGQGVVATEEMLHAVMA 221 The following BLAST results are available for this feature:
BLAST of EWM24462.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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