EWM24462.1, cds6208 (CDS) Nannochloropsis gaditana

Overview
NameEWM24462.1
Unique Namecds6208
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:5421..6535 +
Alignment locationCM002468.1:6743..7064 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24462.1
ProductHAD-like domain protein
Orig transcript idgnl|cribi|Naga_100301g5.10492.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:5421..6535 +
CM002468.1supercontigCM002468.1:6743..7064 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD-like_dom
Homology
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|585105929|gb|EWM24462.1| (HAD-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 976.852 bits (2524), Expect = 0.000e+0
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0
Query:    1 MLHFSSRLHNLHRVLGFCCMLESSSKHFLGSLVLAFLCCLMVETSPHDSSIDAGAHIAELKHLAHCMAVRLLCLHRQHEKREKEQQQQEEGTHQGSFPPRCVFSDLDGTLLHFGGNLLKESYEILPFDGAEKEALSIFKDIGRREMAGQPSTQHEEEHAAVSLGPLWGSAPPSQATCLHSSSELSADSQVPSPPASSSPPAPPCVGRTGSSAPAPRYVTLRYQPDGTTRTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQGLWGLYEELKGEGWGVDGRDYYTSFRVDTRGKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 478
            MLHFSSRLHNLHRVLGFCCMLESSSKHFLGSLVLAFLCCLMVETSPHDSSIDAGAHIAELKHLAHCMAVRLLCLHRQHEKREKEQQQQEEGTHQGSFPPRCVFSDLDGTLLHFGGNLLKESYEILPFDGAEKEALSIFKDIGRREMAGQPSTQHEEEHAAVSLGPLWGSAPPSQATCLHSSSELSADSQVPSPPASSSPPAPPCVGRTGSSAPAPRYVTLRYQPDGTTRTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQGLWGLYEELKGEGWGVDGRDYYTSFRVDTRGKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV
Sbjct:    1 MLHFSSRLHNLHRVLGFCCMLESSSKHFLGSLVLAFLCCLMVETSPHDSSIDAGAHIAELKHLAHCMAVRLLCLHRQHEKREKEQQQQEEGTHQGSFPPRCVFSDLDGTLLHFGGNLLKESYEILPFDGAEKEALSIFKDIGRREMAGQPSTQHEEEHAAVSLGPLWGSAPPSQATCLHSSSELSADSQVPSPPASSSPPAPPCVGRTGSSAPAPRYVTLRYQPDGTTRTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQGLWGLYEELKGEGWGVDGRDYYTSFRVDTRGKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 478          
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|553184661|ref|XP_005854129.1| (sucrose-phosphate phosphatase, partial [Nannochloropsis gaditana CCMP526] >gi|422294931|gb|EKU22231.1| sucrose-phosphate phosphatase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 213.772 bits (543), Expect = 7.830e-65
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
Query:  373 LPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 478
            LPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV
Sbjct:    1 LPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 106          
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|1189393543|gb|OSX80437.1| (hypothetical protein BU14_0052s0053 [Porphyra umbilicalis])

HSP 1 Score: 165.236 bits (417), Expect = 4.156e-43
Identity = 114/276 (41.30%), Postives = 137/276 (49.64%), Query Frame = 0
Query:  218 VTLRYQPDGTTRTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQG------------------LWGLYEELKGEGWGVDGRDYYTSFRVDTRGKMGEQWEGVKSRLPAL-GLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVL 474
            VT+ Y   G  R C  L SLSS   Y+S  T  LVQ +R  G LFV++TGARSSTY  RR   LP  DYE  E GGR++            A  E    W  T++  VGP+                    LW LY E+K  GW VD RDYYTSFRVD  G               L G S SFNLGKADIYP  SGKA A   +L R  L P+  V +FDDDNDL + ++ +  R      TH SV   ++     E     G+LG+EEAL  V+
Sbjct:   38 VTIEYNQLGVQRECAVLGSLSSSTAYMSHETTRLVQTLRAAGVLFVIITGARSSTYARRRAA-LPAADYEFFENGGRML------------ASGELVPEWTATFEADVGPVDASVVPEGDAAPAPATRSGKLWDLYREMKEAGWKVDARDYYTSFRVDVAGTTAAGLNAAAFAAWDLRGFSCSFNLGKADIYPAGSGKAAAAREVLRRHGLRPAHAVTMFDDDNDLELGELAS--RSFLPGATHDSVLDALHRHDNWEMTNSRGVLGTEEALAAVM 298          
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|546326663|ref|XP_005719009.1| (unnamed protein product [Chondrus crispus] >gi|507115656|emb|CDF39098.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 152.14 bits (383), Expect = 3.121e-39
Identity = 97/253 (38.34%), Postives = 131/253 (51.78%), Query Frame = 0
Query:  244 ISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQG-----------------LWGLYEELKGEGWGVDGRDYYTSFRVDTR---GKMGEQWEG-VKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLA 475
            +S+RT  L+  +R  G +FV++TGARSSTY+ RR   LP  D+E  E GGR +      LD A          W   +   VGP+                   LW LY +L  +GW +D RDY T+ RVD +   GK   Q++  V++  P   L+SSFNLGK DIYP+ SGKA A   +L  L +     + LFDDDNDL +  +   GR     +THPSV   +   P      + G+LG+E ALE +LA
Sbjct:    1 MSLRTSHLIAELRAAGVVFVIITGARSSTYIGRRPL-LPQADFEFFENGGRKL--AAGVLDPA----------WTDRFVAEVGPILDRSSLLPDLPPVEVRDGTLWQLYRQLAHDGWNIDARDYMTNIRVDVKKSEGKTASQFQAIVENECPKRALASSFNLGKGDIYPQGSGKANAARHILQTLGIDSKDAIALFDDDNDLELGALV--GRSFLPGVTHPSVLEALKHQPTWTLTEQRGVLGTESALETILA 238          
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|1004146981|gb|KXZ54955.1| (hypothetical protein GPECTOR_3g123 [Gonium pectorale])

HSP 1 Score: 141.354 bits (355), Expect = 5.652e-35
Identity = 98/249 (39.36%), Postives = 127/249 (51.00%), Query Frame = 0
Query:  242 GYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQG-----------LWGLYEELKGEGWGVDGRDYYTSFRVDTRG-KMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 478
            G IS  TL  V  +R  GCLFV+++GAR ST LMR    LP  D    E GGR+++ P + L  A    +E  E W  +   A GP+             LW LY +L+ +GW +D   Y TSFRV  RG K  EQ   + +  P+ GLS SFNLG AD YP TSGK  A   L+ R       C  L DDDNDL +A     G+    SIT  SV+   +A P    V +P   G+  A E +L +++
Sbjct:   26 GVISAATLHQVAQLRSRGCLFVVISGARLSTLLMRLPY-LPAADAYVCENGGRILY-PGSDLPTACPV-TEDKE-WRASHDHAAGPITQDAVPPAEREGPLWDLYRKLQADGWSLDANGYTTSFRVHARGGKTMEQLRALLADKPS-GLSCSFNLGAADFYPSTSGKVQAARHLMSRFAAAAPDCSFLCDDDNDLELA--AEVGKAFLPSITSDSVRQAADARPEHFVVAKPAGQGTTAATEEMLLAVM 267          
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|818250355|gb|KKP37121.1| (hypothetical protein UR27_C0009G0029 [Candidatus Peregrinibacteria bacterium GW2011_GWA2_33_10] >gi|818254669|gb|KKP41295.1| hypothetical protein UR30_C0001G0142 [Candidatus Peregrinibacteria bacterium GW2011_GWC2_33_13] >gi|1083931336|gb|OGJ49115.1| hypothetical protein A2229_01880 [Candidatus Peregrinibacteria bacterium RIFOXYA2_FULL_33_7] >gi|1083935396|gb|OGJ52758.1| hypothetical protein A2483_04765 [Candidatus Peregrinibacteria bacterium RIFOXYC2_FULL_33_13])

HSP 1 Score: 136.732 bits (343), Expect = 4.024e-33
Identity = 84/262 (32.06%), Postives = 131/262 (50.00%), Query Frame = 0
Query:  229 RTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQG----------LWGLYEELKGEGWGVDGRDYYTSFRVDTR---GKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASL 477
            R C  L S +SG  Y+S++T+ L++ ++++G +FV+++G R ST+   R   LP  D   +E GGR+    N  LD          + W++ + E  G ++           LW  Y EL G GW +D   Y  +FR+  +    KM E  + ++  +P L ++++ NLGKAD YP  SGK  A+  +L +  +   +     DDDNDL M    A G+     IT  SV+  +            GILG+EE LE++L  L
Sbjct:   47 RVCNILKSATSGNAYVSLKTINLIEQLKQKGVIFVMISGVRKSTFF-ERIPFLPKADVWIMENGGRIY--VNEILD----------KKWNQRFFEVTGDIETDLPPEKRIGILWDFYRELIGRGWVIDTNSYSANFRISLKQNPDKMQEDIDKLQKEVPPL-ITTAHNLGKADFYPEISGKGNAVKYILEKFNIRIEESAACMDDDNDLPMT--SAVGKVYLPGITSESVREALKRHSDWVVSKNKGILGTEEVLEKILNEL 292          
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|302834030|ref|XP_002948578.1| (hypothetical protein VOLCADRAFT_103907 [Volvox carteri f. nagariensis] >gi|300266265|gb|EFJ50453.1| hypothetical protein VOLCADRAFT_103907 [Volvox carteri f. nagariensis])

HSP 1 Score: 134.806 bits (338), Expect = 1.945e-32
Identity = 102/274 (37.23%), Postives = 132/274 (48.18%), Query Frame = 0
Query:  219 TLRYQPDGTTRTCIEL---PSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQ-----------GLWGLYEELKGEGWGVDGRDYYTSFRVDTRG-KMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTR---PGILGSEEALERVL 474
            T+ ++P    R    L   PS S   G IS  TL LV  +R  G LFV++TGAR ST LMR    LP  D    E GGR+++ P + L  A     +    W  +  + VG ++            LW LY  L  EGW +D   Y TSFRV  RG K  +   G+ +   + GLS SFNLG AD YP TSGK  A   L+ R  +    C  L DDDNDL +A     GR    SI+  SV+    A P    V +    G+  +EE L+ V+
Sbjct:   15 TIMHEPKTIDRDAAVLLTPPSASGRQGVISAATLHLVAQLRSRGALFVVITGARLSTLLMRLPY-LPAADAYVCENGGRILY-PGSDLPTACPITEDAE--WRSSHDQVVGSVEQDAVQPKDRTGSLWELYRRLLAEGWYLDANGYTTSFRVHARGDKTMDDLRGLAA-FRSEGLSCSFNLGAADFYPATSGKVMAARHLMVRFGVAAKDCCFLCDDDNDLELAR--EVGRAFLPSISSDSVRQAAEARPEHFVVAKCEGQGVAATEEMLQAVM 281          
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|544209258|ref|XP_005535032.1| (hypothetical protein CYME_CMA027C [Cyanidioschyzon merolae strain 10D] >gi|449015344|dbj|BAM78746.1| hypothetical protein CYME_CMA027C [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 130.183 bits (326), Expect = 4.643e-30
Identity = 101/299 (33.78%), Postives = 133/299 (44.48%), Query Frame = 0
Query:  231 CIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIH--DPNARLDLASDAHSEGHEG---W---------------------DRTWKEAVGPLQGLWGLYEELKGEGWGVDGRDYYTSFRVDTRGKM---GEQWE--------------------------GVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVL 474
            C  LP+L+ G GY+S R +ELV  +R  G    LLTGARSST L RR   LPVVD    E GGRL+   D     D+      E   G   W                     D +  E   P+  LW    EL   GW +D R+YYT+FRVD    +     QWE                           +++R+  LGL ++ NLGK D++P  SGK      +L R      Q V + DDDND+ +A+ C S      S++H  V+A +   P  +  T  G L +EEAL  VL
Sbjct:   61 CRVLPTLTKGCGYLSERVVELVDTLRVHGVFVALLTGARSST-LYRRLPLLPVVDAIAWENGGRLMWRADTAYVEDVTWARRLEPWTGPHPWCAADECVVPREQDSPYPSTAVDGSSDEHPDPVAPLWQAASELATAGWMLDTREYYTAFRVDIASSLRSRNVQWERPASSTAATSAVNGVVTEQHMQAATADIRARVTPLGLQTASNLGKLDVFPGCSGKRNVAEYILARTGCTRDQAVAMIDDDNDIELAEWCGSA--YLPSVSHEHVRAVIQEHPEWKLSTFSGPLATEEALTAVL 356          
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|922853265|gb|KOO21892.1| (hypothetical protein Ctob_000273 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 125.561 bits (314), Expect = 4.408e-27
Identity = 90/270 (33.33%), Postives = 128/270 (47.41%), Query Frame = 0
Query:  224 PDGTTRTCIELPSLSSGPGYISVRTLELVQAIRREGCLFVLLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLASDAHSEGHEGWDRTWKEAVGPLQG----------LWGLYEELKGE--GWGVDGRDYYTSFRVDTRGKMGEQW---EGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRPGILGSEEALERVLASLV 478
            P G  R C  LPS + G G +S RT+EL+  +R  G +FV++T AR ST L  R   LP  D    E G R+       LD          E W + ++E  GPL+           LW L+   + E  G   D R YY  FRVDT+G    +      +++ LP  G++ + NLGK D +P  SGK  A++ L     +   +   LFDDDNDL MA+ CA      ++    S  A  + +  V +    G+   EE LE++L  +V
Sbjct:  384 PTGEQRVCRLLPSSTMGDGLVSERTVELIAELRARGVIFVIVTAARKST-LFEREPLLPPSDAYVCETGSRIYRGGLDALD----------EAWAKGFEEVSGPLERELDVSERPEPLWQLFRRFQAEVPGLKCDARSYYGCFRVDTQGNTAVEAALRACIEAHLPH-GITWAMNLGKYDFFPSASGKGNAVAYLQAVYGVRADESCCLFDDDNDLPMAERCAVHYLPGLTSQSVSRAAAEHPEWHVASKAGQGVFAIEECLEQLLERVV 641          
BLAST of EWM24462.1 vs. NCBI_GenBank
Match: gi|159472737|ref|XP_001694501.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158276725|gb|EDP02496.1| predicted protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 115.161 bits (287), Expect = 7.229e-26
Identity = 91/229 (39.74%), Postives = 114/229 (49.78%), Query Frame = 0
Query:  264 LLTGARSSTYLMRRRTGLPVVDYECIEGGGRLIHDPNARLDLA-----------SDAHSEGHEGWDRTW-KEAVGPLQGLWGLYEELKGEGWGVDGRDYYTSFRVDT--RGKMGEQWEGVKSRLPALGLSSSFNLGKADIYPRTSGKATALSRLLPRLFLHPSQCVVLFDDDNDLGMADVCASGRRIAVSITHPSVQAYVNADPRVETVTRP---GILGSEEALERVLA 475
            +++GAR ST LMR    LP+ D    E GGR+++ P + L  A           S  H+ G    D T  +E  GPL   W LY +L  EGW +D   Y TSFRV     GK  E+   V +  PA GL+SSFNLG AD YP TSGK  A   L+ R       C  L DDDNDL +A     GR    SIT  SV+    A P    V +    G++ +EE L  V+A
Sbjct:    1 VISGARLSTLLMRLPY-LPLADAYVCENGGRILY-PGSDLPTACPVTEDKEWRASHDHAAGSIEQDATPPQERKGPL---WDLYRKLHSEGWSLDANGYTTSFRVHAGRNGKSLEELRAVVAAAPA-GLASSFNLGAADFYPDTSGKVMAARHLMARFGAPAPACSFLCDDDNDLQLA--AEVGRAFLPSITSDSVRVAAEARPEHFVVAKTAGQGVVATEEMLHAVMA 221          
The following BLAST results are available for this feature:
BLAST of EWM24462.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105929|gb|EWM24462.1|0.000e+0100.00HAD-like domain protein [Nannochloropsis gaditana][more]
gi|553184661|ref|XP_005854129.1|7.830e-65100.00sucrose-phosphate phosphatase, partial [Nannochlor... [more]
gi|1189393543|gb|OSX80437.1|4.156e-4341.30hypothetical protein BU14_0052s0053 [Porphyra umbi... [more]
gi|546326663|ref|XP_005719009.1|3.121e-3938.34unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|1004146981|gb|KXZ54955.1|5.652e-3539.36hypothetical protein GPECTOR_3g123 [Gonium pectora... [more]
gi|818250355|gb|KKP37121.1|4.024e-3332.06hypothetical protein UR27_C0009G0029 [Candidatus P... [more]
gi|302834030|ref|XP_002948578.1|1.945e-3237.23hypothetical protein VOLCADRAFT_103907 [Volvox car... [more]
gi|544209258|ref|XP_005535032.1|4.643e-3033.78hypothetical protein CYME_CMA027C [Cyanidioschyzon... [more]
gi|922853265|gb|KOO21892.1|4.408e-2733.33hypothetical protein Ctob_000273 [Chrysochromulina... [more]
gi|159472737|ref|XP_001694501.1|7.229e-2639.74predicted protein [Chlamydomonas reinhardtii] >gi|... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6223rna6223Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications