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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100239g6.3874.mrna |
| Orig protein id | gnl|cribi|Naga_100239g6.3874 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:867027..867490 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6216 ID=rna6216|Name=rna6216|organism=Nannochloropsis gaditana|type=mRNA|length=1463bp
GTAGGACATTTTTCGAGTCTTTCAGGAACTAATGGGGAGTCACGCGTGGA
ACGTTTCTGTGGCACAGCGACGAGGCCGACGCCACCGGTGCAGGAAATTT
GGTCCCTGGGCGTATATATATATATATGTATTTCCCGCTTTTACAATTTG
CCGTGTGTCCACTAGTACTGATGAGGAAAGTGTACGCTTGGAAGCTGAGC
CTCCAGAGTGAGGCTGGACATTTCTGTGGTTGGCGTTTATTACCGATTTA
TGTAGCTAGCGGGAGCGTGGCTTACCTCCCTTGACGCCGAGACATAATCC
TTGCTTTTCCATCCATTGCTGAGGAAACTTGCGCTCATCACTTTTCACCT
CTCTTCTCCTCCAGATCAAAAGCTGTCTTCTTCCTATAATCGGTGCGTCA
CAAAAATGCTGAAGGTGGCAGTTCTAATCCTCAGCCTGGCCTCCTTGGGG
CTCTCGGCTGCGGATGAGCTTGTCCCGACGAGAGATACCACATCGAGCCC
TAGTGGGAGCCTACGGGGCAGCAACAGCATCTTGAATGTGACGAATGAAT
CAGAAGTAGAACCCCGTCGGGTGCCGGAGGAGTTTTCATGCGTCGGGAGC
ATATGCACGACCCTCGCGACGGTGAGGTTGTCTCAGGCCGGTCCTGAACA
GAAGCAGGAGGCGCTCGAGGTGCGTCATCGTGGCGATGCCGAGCGAATCC
CACGCACGATGAAGGCTGGAGACGTAAAAAGTGCGTCTACCAGCCTGAGC
CCAGTACCCGGGATTGCCGCTCTGGAGACGTCTGGGCGAGGAGGGAAAGC
CCTCGGAGCCGCCGACGGCCCCACGTGTAAGGGCGTGAAGTGTCTGATGC
CCGCCATGCCACCCATGGTCGCCCAGCCTGTGGCTCAGCCCCTGGCGCCT
AGCAACGGGGTCGTAATGGAGGAGCGCAACGATACGAATGCCAACAGCAC
CAGCAGCATCACCACTACCACCACCGCCGCCGACGGCACCACCATCTCCT
CCTCCCTCATCTGCACCAATAGCCGGTGCGTGCTTTGCAGCGAGGGACTG
TGCAAAGTCGCCGAACCCGACATGCAAGGGAACAGCACCGCCTTGAGCAT
GACTGGGCCTGGCACACGCGTGGAGATCACCTGCAAGGACAGCGTGTGCG
TGACCGTGACGACGGAGCGCGCGGCCAACGGCACGCTCTCGTCTACCACC
ACCCAAGCCACCACGAAAAGCGTGCCTTTCAGGGGGACGACGACGAAGAG
CGGCGAAGGGATCGGCGACAGTGGCTGATATTATGATGGTGTCCCTTTTT
TAAAGCGGGCGCTCGGCAGCCGCCAAGCGGCAGTGTGCAGAGGAAGGGTA
CAGGAAAAATGTATGTCGGGTTCATACTTGTCTTATCTTAAAAATGACTC
GGATCGAGAGAGAAGAATCTTTGCATGTATACATGGAAAAGTAAAATTAT
CGTCATCTCCTGA back to topprotein sequence of rna6216 >rna6216-protein ID=rna6216-protein|Name=rna6216|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
MSYQDMEARQTFICPSAVTFLRKNMCIWFKGHSAVEFEDFLKVGGGSSLT
LLSFHRHRGSASAYNILTCPLIESRKRCKICHEYAGWNHMKGGSRDHLVG
KGVSCIFVY back to topmRNA from alignment at CM002467.1:867027..867490+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6216 ID=rna6216|Name=rna6216|organism=Nannochloropsis gaditana|type=mRNA|length=464bp|location=Sequence derived from alignment at CM002467.1:867027..867490+ (Nannochloropsis gaditana)
GGCCTCGTCGCTGTGCCACAGAAACGTTCCACGCGTGACTCCCCATTAGT
TCCTGAAAGACTCGAAAAATGTCCTACCAAGACATGGAGGCGAGGCAGAC
ATTCATTTGTCCGTCGGCAGTGACTTTTCTTCGAAAAAACATGTGCATAT
GGTTCAAAGGACATTCCGCGGTCGAATTTGAGGACTTCCTcaaggtggga
ggcgggTCATCCCTCACATTACTTTCTTTTCATCGACATCGAGGGTCTGC
GTCCGCGTATAATATTCTCACCTGCCCTCTCATTGAATCGCGAAAACGCT
GTAAAATTTGCCATGAATATGCGGGGTGGAATCACATGAAAGGCGGGAGC
AGGGACCATCTTGTCGGCAAGGGTGTGTCGTGCATTTTTGTGTATTAGCA
CAGGGTTCCGGGTCACGTACCACGATATGATATATCTTAAAGAACAATAA
AGAGAAAAGACGAA back to topCoding sequence (CDS) from alignment at CM002467.1:867027..867490+ >rna6216 ID=rna6216|Name=rna6216|organism=Nannochloropsis gaditana|type=CDS|length=330bp|location=Sequence derived from alignment at CM002467.1:867027..867490+ (Nannochloropsis gaditana)
ATGTCCTACCAAGACATGGAGGCGAGGCAGACATTCATTTGTCCGTCGGC
AGTGACTTTTCTTCGAAAAAACATGTGCATATGGTTCAAAGGACATTCCG
CGGTCGAATTTGAGGACTTCCTcaaggtgggaggcgggTCATCCCTCACA
TTACTTTCTTTTCATCGACATCGAGGGTCTGCGTCCGCGTATAATATTCT
CACCTGCCCTCTCATTGAATCGCGAAAACGCTGTAAAATTTGCCATGAAT
ATGCGGGGTGGAATCACATGAAAGGCGGGAGCAGGGACCATCTTGTCGGC
AAGGGTGTGTCGTGCATTTTTGTGTATTAG back to top
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