EWM24476.1, cds6201 (CDS) Nannochloropsis gaditana

Overview
NameEWM24476.1
Unique Namecds6201
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:867095..867424 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24476.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100239g6.3874.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:867095..867424 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24476.1 vs. NCBI_GenBank
Match: gi|585105946|gb|EWM24476.1| (hypothetical protein Naga_100239g6 [Nannochloropsis gaditana])

HSP 1 Score: 230.335 bits (586), Expect = 1.175e-76
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 
Query:    1 MSYQDMEARQTFICPSAVTFLRKNMCIWFKGHSAVEFEDFLKVGGGSSLTLLSFHRHRGSASAYNILTCPLIESRKRCKICHEYAGWNHMKGGSRDHLVGKGVSCIFVY 109
            MSYQDMEARQTFICPSAVTFLRKNMCIWFKGHSAVEFEDFLKVGGGSSLTLLSFHRHRGSASAYNILTCPLIESRKRCKICHEYAGWNHMKGGSRDHLVGKGVSCIFVY
Sbjct:    1 MSYQDMEARQTFICPSAVTFLRKNMCIWFKGHSAVEFEDFLKVGGGSSLTLLSFHRHRGSASAYNILTCPLIESRKRCKICHEYAGWNHMKGGSRDHLVGKGVSCIFVY 109
The following BLAST results are available for this feature:
BLAST of EWM24476.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105946|gb|EWM24476.1|1.175e-76100.00hypothetical protein Naga_100239g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6216rna6216Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications