EWM24496.1, cds6177 (CDS) Nannochloropsis gaditana

Overview
NameEWM24496.1
Unique Namecds6177
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:810776..811183 -

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Properties
Property NameValue
Protein idEWM24496.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101596g1.9878.mrna
GbkeyCDS
End range.
End range811183
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:810776..811183 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24496.1 vs. NCBI_GenBank
Match: gi|585105982|gb|EWM24496.1| (hypothetical protein Naga_101596g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 243.432 bits (620), Expect = 5.438e-81
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 
Query:    1 SPQASRPGLPVAVALTTRYLPPLVLQAPPPRAASTPLAADGKPTKPFLCPSLVPFLPSSLLLHLDLPPTFPRASLRETPFLPRSLPPPLLSFAFPTPTSAGSTTPPATTTTITTTTDTTHAKEKFPHPSPSPPVP 135
            SPQASRPGLPVAVALTTRYLPPLVLQAPPPRAASTPLAADGKPTKPFLCPSLVPFLPSSLLLHLDLPPTFPRASLRETPFLPRSLPPPLLSFAFPTPTSAGSTTPPATTTTITTTTDTTHAKEKFPHPSPSPPVP
Sbjct:    1 SPQASRPGLPVAVALTTRYLPPLVLQAPPPRAASTPLAADGKPTKPFLCPSLVPFLPSSLLLHLDLPPTFPRASLRETPFLPRSLPPPLLSFAFPTPTSAGSTTPPATTTTITTTTDTTHAKEKFPHPSPSPPVP 135
The following BLAST results are available for this feature:
BLAST of EWM24496.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105982|gb|EWM24496.1|5.438e-81100.00hypothetical protein Naga_101596g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6192rna6192Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications