rna6192, rna6192 (mRNA) Nannochloropsis gaditana

Overview
Namerna6192
Unique Namerna6192
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length471
Alignment locationCM002467.1:809297..811184 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101596g1.9878.mrna
Orig protein idgnl|cribi|Naga_101596g1.9878
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:809297..811184 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101596g1gene5982Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24496.1cds6177Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6192rna6192-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6192 ID=rna6192|Name=rna6192|organism=Nannochloropsis gaditana|type=mRNA|length=471bp
CGTCCAAGGCACATCAAGTGAGTCCTTGATTTATCATCGCCGTCCAACAT
CCATCTTTACACGTGCAAACATTCAGAAGCAGCCACGAGCATTCCAAGAA
TGGAGTTTCCAAAGTCCTCTGGCACAAGTACAGTGCCCGCTGGGCACGGT
CCCGATGTTTCTGGAGGAGGCGGAACAAGCAGAGGAGCCGAGCGCATGAA
GGGGGAGGGAGGGAGGGAAAGTCCCTCCCCTTCTCCACCGACCAAATCTC
CTCAAAACGAAGCAGGGCTTCAGGAGGGAGGGAGTGAGAGGAGGAGCAAA
ACCCCTCCTCCTGGGTGTGCCCGTGCTGTTGGGGACGGGAGCAGGAGTCC
GCTTGTTGTGTCGAACGGTTATGCCACAGTCGCCTCGGCCCTCGGCGGTG
ATGTGGGGGACGGAGGAGAACAACGGGGAGGGATGGAGGGGCAGGGAAGG
GTTCGTCGGGGTGGGAGAGGA
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protein sequence of rna6192

>rna6192-protein ID=rna6192-protein|Name=rna6192|organism=Nannochloropsis gaditana|type=polypeptide|length=135bp
SPQASRPGLPVAVALTTRYLPPLVLQAPPPRAASTPLAADGKPTKPFLCP
SLVPFLPSSLLLHLDLPPTFPRASLRETPFLPRSLPPPLLSFAFPTPTSA
GSTTPPATTTTITTTTDTTHAKEKFPHPSPSPPVP
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mRNA from alignment at CM002467.1:809297..811184-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6192 ID=rna6192|Name=rna6192|organism=Nannochloropsis gaditana|type=mRNA|length=1888bp|location=Sequence derived from alignment at CM002467.1:809297..811184- (Nannochloropsis gaditana)
AAGCCCGCAAGCTTCCCGCCCCGGCCTACCAGTGGCAGTCGCCTTAACAA
CACGGTATCTTCCCCCGCTCGTCCTCCAAGCTCCCCCCCCTCGTGCCGCC
TCCACGCCCCTCGCCGCGGACGGAAAACCGACGAAGCCCTTCCTATGCCC
CTCCCTCGTCCCCTTCCTCCCCTCCTCCCTTCTCCTCCACCTCGACCTCC
CCCCCACCTTCCCGAGAGCGTCGCTACGGGAAACGCCCTTCCTCCCTCGA
TCCCTCCCTCCTCCCCTCCTGTCATTCGCTTTCCCCACCCCAACCTCAGC
TGGCTCGACCACACCACCAGCCACCACCACCACCATCACCACAACCACAG
ACACAACACATGCGAAGGAAAAATTCCCTCACCCATCGCCTAGCCCCCCT
GTTCCTTAGAGACCCTTCTCCCCCCGGCAGGGAAGGAGGGAAGGAGGGAG
GGGCGGAGGGCGGGAGGGAGGGAGGGCCGGGCGTGGGTGGCCACGGTCAG
TCGGCCGCACCGGTGCGGGAAATGTCCTTGACGCGCCCATCTAGACTCGG
GTTGTGAGACGGGGCGGAAGGGGTGGGGGGATGGCAGGAAGGAGGGCGGG
ACAGGGTAAAGAGGACTGCCAAAAGGAGTGGAACACTACAGCCGCCGAGA
AGGTTCATGGACAGGAGGAATCGAACATAAAATTGAAGATGGGATGAAAT
GTATGAAATGTAAAATGATGCGACGGATGTCATATACTGCATGTGAATCG
ACCAGGGACAGGCCAGAGTCAGGAGCTGGGAGATAGCCCTAATTCGAACC
CTAATTCGAACCCTAACCCTATCCCTAGCCCTAACCCGAACCCAAAGAGA
CGTGAGAGGCGTCCGACGGGAGGGCTGTGCATTGAAACCAAAATGACTGA
AATGAAAAAATGGGATCTGCGTATTTTGAGAATGTGTGGGGGGGGCGTGG
AGGCGGAAAAACTTTTGACCACGTCCTTTATGGCGAGGAAGAGGCAGAGC
CGATGCCGAAGGCGAAGGGGAACGACAGGCGCAGGAAGGGGAATAGCACA
GCCGAGAGAGGAGCGTAAACCGGAGTGGTTAAGAGCACAACGATAAAGGA
TAGGGATCGGTAAGCGATTTCAAAAAAAAGAAACTTTCCACGCTGTCGTG
ATTACTTGGGAGGAAAATCATGCCCCGGTTACCTCTCTGAGTCTCTGTCG
TATTGCAAGCAACCCCCCTCGTCTTGACCCTTGGGGGTGCGTCGACACAC
TGGCCGAAAGCTACGATGGAAGGATCGTTGTGTATTGTGTGTGGAACGAG
AGGGATCGGTTTGTACGTCGATGGCGTCGGCTTGATTGCCGCTCCTGGCA
GGCAGAGCAGAGGGTCGCGGGGCCGAAGGAGCGACCATTGGGAGCGCAAC
GCGTGCAGATCCGTGCAAGCAACCTAGGATTCTAATCAGTGTGGAGAGCG
ATCGAAGCTTTGCGTCCAACTTGCCATGATGAACCAGAAAAGAAAGCCGA
TGTCAGGAGAAAAACGTCTGTGCTCGTCCCAAAAGCCGACACACGATGAC
AGGAAGGTCTGGGTAGGAAGACATTGACAGAAGGAAAAAAGGAATCTGCG
GAAAAGAAGACGGGAAGGAGGAGGGAGACAGCGAAGCTAACATGAGAGCA
TTCTGAACGGACCTTCTAGTCTACTTGTTGGGGTGAGAAATCCGGATCGC
TTTATTTTCCCTCTCGGGCTGCATGAACGTGCCAACGCGCGTCGATGTCT
TCAGCTTTCCTTTCGGGAGGAATCCTGATTCACAAGGGGGGGGGAGGGAT
AGCTCCCTGCCGAGGAGAGGATGTGCTCGACACCGAAGCCGGCGGGAATT
CCCCAATCACCGAATACAAAATCCTTCGCGCTTGCTCC
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Coding sequence (CDS) from alignment at CM002467.1:809297..811184-

>rna6192 ID=rna6192|Name=rna6192|organism=Nannochloropsis gaditana|type=CDS|length=408bp|location=Sequence derived from alignment at CM002467.1:809297..811184- (Nannochloropsis gaditana)
AGCCCGCAAGCTTCCCGCCCCGGCCTACCAGTGGCAGTCGCCTTAACAAC
ACGGTATCTTCCCCCGCTCGTCCTCCAAGCTCCCCCCCCTCGTGCCGCCT
CCACGCCCCTCGCCGCGGACGGAAAACCGACGAAGCCCTTCCTATGCCCC
TCCCTCGTCCCCTTCCTCCCCTCCTCCCTTCTCCTCCACCTCGACCTCCC
CCCCACCTTCCCGAGAGCGTCGCTACGGGAAACGCCCTTCCTCCCTCGAT
CCCTCCCTCCTCCCCTCCTGTCATTCGCTTTCCCCACCCCAACCTCAGCT
GGCTCGACCACACCACCAGCCACCACCACCACCATCACCACAACCACAGA
CACAACACATGCGAAGGAAAAATTCCCTCACCCATCGCCTAGCCCCCCTG
TTCCTTAG
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Synonyms
Publications