|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100260g6.1402.mrna |
| Orig protein id | gnl|cribi|Naga_100260g6.1402 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:689350..690376 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6143 ID=rna6143|Name=rna6143|organism=Nannochloropsis gaditana|type=mRNA|length=1760bp
AAGACAGGCTTGAGCGGCAATTACGACCTCCTGTGACGCTGCGCTTACAG
CGCTTGTGGATCCACGCCTGTGGTTTGACCTTCAAAAGACGACACATGAT
ACAACACATGTCTTCCTTGATGGTGCGTTCTTTCTCGACGTGTGAAAATG
CCAAAAGATATCTGTGTACGACATCGATCGGCCCCTGATTCTCTCGCCAA
CTTAGGTATCTTACGCTCACACACCGCCCCACCGTGACCCCAGGGCACAA
TCAAAGCTGCCACCCACATCTCTTCCACCATGCTTCAACAACTTCCTCGG
TGGACATTGACCGCCGCATTCTCCGCCGCAGCGTTGTCTTCCTTCTCCGG
GGTTCCCTTCGAATCTGTGCAAGGCGAGCTCGTGTTGTCGTACGTTGTCC
TGCGCCATGGTGCCCGCAATATGCTACCCAAGACAAGCACTCTTCAAGAA
TCCAATGTGTTTGGTGGCCCCAACCTCCTTCCAGAAGGTCAACAACAATG
CTATGAGGTTGGTAAGGAATTTCGGGAACGATACCTTGACCTTGCCACGT
GCGCCCGGACAGGTACCTGTCTTACCCCTCACGGCACTGAATCCAAATAC
GGCGTCGTCGACTCAAACCCTGACTTGAACTACAACAATTTCAACACCCT
GTTTAACTCGTCTGCTTTGCACCGCACGTTGTTGAGCGCCAGCAGTTTTT
TGTCAGGGGCGTTTGGAGAGGAGGCTTGCAATGGAGAAGAGCTGCACGTG
CTCTCTCAACCTCCTGTCTTTTCGACCGAAGAGGGGCAAGATTGGCGCAT
ACGCGCATACACCAAGTGCCCCACATACGACCGTGACCTGGAAAGGTGGT
TCCAAAGCCCCGAGTTTCGCGCCAAAGAAGCCGAGTCTTTGTCCTTGCGC
ACCCGGGTTCAAGCCCTGGCCGGCCCCGCCGTGAACGTCTCTTTGGCCGA
ATGGTGGAACGTCTACGATCGATTTCAGGTTCGCCAGGCGTCCGTGGACA
GGGACGAGGTCCCTCAGGTTCTGGACGACGAGACCTATGAAGGAATGGTG
GCTCTCGCCATGTGGTTGGAGACCGCCAAGATGCGTTCGTCCTTGGTGCA
GAACCGGGTCGGGGGGGGTCTCCTGGCCGACGTGCTGGGACGGATGGAAC
AGGCCGTGCAGCACCGTGAGACAAGCTTCCCGCCCCACGTCTACCGGTTG
ACGGGCGTGGCGGCCCATTACAACACCTTGCTAGGGGTCCTCGCCTCCCT
CCAGGCGGACCAGGTCGCGAACAGCACGCTGTCCTGGGTCCGGGAGAAAA
TCCCGGCCTTGGCAGCGGTCCTCGTCTTTGAGCTGCACGCAGTACCCGCA
CAGGGCGGGGAGGAATACCTGGTCCGGCTCATGTATCAGGACGGCCCCGG
CGAGCCTTACCAGGGCATTTCCCTCCCCTGCAGCCGAGACGGTGACGCCG
ACCATGCGTGCCCGCTGCGAGAATTTTTCCAGTTGGGAGCCCCGCAAGCC
TTGAGTGCATCGGAGTGGTGTGCGGCCTGTGGGAACAGGGATGTGTGGGC
TTGTCAAGCAGGGGGCAGAGGCACGGGCAAGCTCCGAAGCAGGGGAAGGT
GAAGAAGGGGAAGGGGGTCCGCATGTAGGCGGCAGGAGGTGAACGATTTC
AATAGCATGACACCCGTGCTCGTCAGGCACGTGCAGGACAGTGGTAAGTG
AAAGAAAGAAAGGCAGGGAAGGGAAGGTCTCCGAGACCCTTCAACCTGTA
GGCGACGATG back to topprotein sequence of rna6143 >rna6143-protein ID=rna6143-protein|Name=rna6143|organism=Nannochloropsis gaditana|type=polypeptide|length=212bp
MEGFAKLQATVQATIETHCPEVARWDKDMSGEGQDEGSRGVLPTLRGAEE
ALQSAHVRYSRVSHLVDVQNRYRQDCGKLSERVKALYEQAAEEDANGTDL
KRQEMHARSMAVFEKVKALTDRVRRAQEAYRRLGIDVRGGGGGEDEGLGK
GVEGESLSHLRQEVRDLGERLRQIRYVAGEEGLVNGQEGEEEEEKDEDED
APPPPATAYGTD back to topmRNA from alignment at CM002467.1:689350..690376- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6143 ID=rna6143|Name=rna6143|organism=Nannochloropsis gaditana|type=mRNA|length=1027bp|location=Sequence derived from alignment at CM002467.1:689350..690376- (Nannochloropsis gaditana)
GACAAGGCTGGAGGCACCCTCATGCCTGCTGGACCAGTCACCACAAACCA
GCAACGCGTTATCCATGCAATCATCCAGCGCTTGAAATGGCCTTCTTCGT
TTCAATGATGCACAGGGGCTCCGCAGAAGTACTTCGACATTCCGAGTGCC
ATTTTCCGCCATGGAGGGCTTCGCAAAGCTTCAGGCTACGGTGCAGGCGA
CGATAGAGACCCATTGTCCGGAGGTGCGTACCACTCGTTGCCTCACCGTT
CTCTGGCAAATGTGCGAAGACATCCGTAGCTTTAACAACCTCTGGCCCAA
CAGGTCGCACGTTGGGACAAAGACATGTCTGGGGAGGGGCAAGACGAGGG
CTCACGAGGCGTGTTGCCCACGTTGCGTGGCGCAGAGGAGGCGCTTCAGT
CAGCGCATGTCCGCTATTCCCGGGTCTCGCACCTGGTCGACGTGCAAAAT
CGGTACCGGCAAGACTGTGGGAAACTGAGCGAGCGGGTCAAAGCCTTGTA
CGAGCAAGCCGCGGAGGAAGATGCGAACGGGACGGACTTAAAGCGGCAAG
AAATGCACGCACGGTCGATGGCCGTGTTTGAGAAGGTCAAAGCCTTGACA
GACCGCGTGCGCCGCGCCCAAGAGGCGTACCGGCGCCTGGGCATCGACGT
GAGGGGTGGGGGAGGAGGGGAGGATGAAGGATTGGGAAAGGGAGTCGAGG
GAGAGAGTTTAAGCCACCTCCGGCAGGAGGTACGGGACCTGGGGGAGCGC
CTCCGGCAAATCCGGTACGTCGCCGGGGAGGAAGGCCTAGTGAATGGGCA
AGAAGGGGAAGAAGAGGAAGAAAAGGACGAGGACGAGGACGCCCCCCCCC
CCCCTGCGACGGCTTACGGCACAGACTGAAGGAGAGAGGGCCAGCCGGGA
TTAGAGTGCATCGGTGCAAGCAAAGAAAGCGGGCGCCTGGGATGTCCAGC
AAGATCATGTACGGACGCCTAGCAAAATTGCGGGCGGGACATTGCAAATG
CAGTGAAAGCAAACTATCCCCTTGTGC back to topCoding sequence (CDS) from alignment at CM002467.1:689350..690376- >rna6143 ID=rna6143|Name=rna6143|organism=Nannochloropsis gaditana|type=CDS|length=1278bp|location=Sequence derived from alignment at CM002467.1:689350..690376- (Nannochloropsis gaditana)
GTCGCACGTTGGGACAAAGACATGTCTGGGGAGGGGCAAGACGAGGGCTC
ACGAGGCGTGTTGCCCACGTTGCGTGGCGCAGAGGAGGCGCTTCAGTCAG
CGCATGTCCGCTATTCCCGGGTCTCGCACCTGGTCGACGTGCAAAATCGG
TACCGGCAAGACTGTGGGAAACTGAGCGAGCGGGTCAAAGCCTTGTACGA
GCAAGCCGCGGAGGAAGATGCGAACGGGACGGACTTAAAGCGGCAAGAAA
TGCACGCACGGTCGATGGCCGTGTTTGAGAAGGTCAAAGCCTTGACAGAC
CGCGTGCGCCGCGCCCAAGAGGCGTACCGGCGCCTGGGCATCGACGTGAG
GGGTGGGGGAGGAGGGGAGGATGAAGGATTGGGAAAGGGAGTCGAGGGAG
AGAGTTTAAGCCACCTCCGGCAGGAGGTACGGGACCTGGGGGAGCGCCTC
CGGCAAATCCGGTACGTCGCCGGGGAGGAAGGCCTAGTGAATGGGCAAGA
AGGGGAAGAAGAGGAAGAAAAGGACGAGGACGAGGACGCCCCCCCCCCCC
CTGCGACGGCTTACGGCACAGACTGAATGGAGGGCTTCGCAAAGCTTCAG
GCTACGGTGCAGGCGACGATAGAGACCCATTGTCCGGAGGTCGCACGTTG
GGACAAAGACATGTCTGGGGAGGGGCAAGACGAGGGCTCACGAGGCGTGT
TGCCCACGTTGCGTGGCGCAGAGGAGGCGCTTCAGTCAGCGCATGTCCGC
TATTCCCGGGTCTCGCACCTGGTCGACGTGCAAAATCGGTACCGGCAAGA
CTGTGGGAAACTGAGCGAGCGGGTCAAAGCCTTGTACGAGCAAGCCGCGG
AGGAAGATGCGAACGGGACGGACTTAAAGCGGCAAGAAATGCACGCACGG
TCGATGGCCGTGTTTGAGAAGGTCAAAGCCTTGACAGACCGCGTGCGCCG
CGCCCAAGAGGCGTACCGGCGCCTGGGCATCGACGTGAGGGGTGGGGGAG
GAGGGGAGGATGAAGGATTGGGAAAGGGAGTCGAGGGAGAGAGTTTAAGC
CACCTCCGGCAGGAGGTACGGGACCTGGGGGAGCGCCTCCGGCAAATCCG
GTACGTCGCCGGGGAGGAAGGCCTAGTGAATGGGCAAGAAGGGGAAGAAG
AGGAAGAAAAGGACGAGGACGAGGACGCCCCCCCCCCCCCTGCGACGGCT
TACGGCACAGACTGAATGGAGGGCTTCGCAAAGCTTCAGGCTACGGTGCA
GGCGACGATAGAGACCCATTGTCCGGAG back to top
|