EWM24546.1, cds6128 (CDS) Nannochloropsis gaditana

Overview
NameEWM24546.1
Unique Namecds6128
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:690154..690216 -
Alignment locationCM002467.1:689498..690073 -

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Properties
Property NameValue
Protein idEWM24546.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100260g6.1402.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:690154..690216 -
CM002467.1supercontigCM002467.1:689498..690073 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24546.1 vs. NCBI_GenBank
Match: gi|585106055|gb|EWM24546.1| (hypothetical protein Naga_100260g6 [Nannochloropsis gaditana])

HSP 1 Score: 425.631 bits (1093), Expect = 1.198e-150
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0 
Query:    1 MEGFAKLQATVQATIETHCPEVARWDKDMSGEGQDEGSRGVLPTLRGAEEALQSAHVRYSRVSHLVDVQNRYRQDCGKLSERVKALYEQAAEEDANGTDLKRQEMHARSMAVFEKVKALTDRVRRAQEAYRRLGIDVRGGGGGEDEGLGKGVEGESLSHLRQEVRDLGERLRQIRYVAGEEGLVNGQEGEEEEEKDEDEDAPPPPATAYGTD 212
            MEGFAKLQATVQATIETHCPEVARWDKDMSGEGQDEGSRGVLPTLRGAEEALQSAHVRYSRVSHLVDVQNRYRQDCGKLSERVKALYEQAAEEDANGTDLKRQEMHARSMAVFEKVKALTDRVRRAQEAYRRLGIDVRGGGGGEDEGLGKGVEGESLSHLRQEVRDLGERLRQIRYVAGEEGLVNGQEGEEEEEKDEDEDAPPPPATAYGTD
Sbjct:    1 MEGFAKLQATVQATIETHCPEVARWDKDMSGEGQDEGSRGVLPTLRGAEEALQSAHVRYSRVSHLVDVQNRYRQDCGKLSERVKALYEQAAEEDANGTDLKRQEMHARSMAVFEKVKALTDRVRRAQEAYRRLGIDVRGGGGGEDEGLGKGVEGESLSHLRQEVRDLGERLRQIRYVAGEEGLVNGQEGEEEEEKDEDEDAPPPPATAYGTD 212
[Close]
BLAST of EWM24546.1 vs. NCBI_GenBank
Match: gi|553187535|ref|XP_005854631.1| (hypothetical protein NGA_0169500 [Nannochloropsis gaditana CCMP526] >gi|422294429|gb|EKU21729.1| hypothetical protein NGA_0169500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 366.311 bits (939), Expect = 1.933e-127
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 
Query:    1 MEGFAKLQATVQATIETHCPEVARWDKDMSGEGQDEGSRGVLPTLRGAEEALQSAHVRYSRVSHLVDVQNRYRQDCGKLSERVKALYEQAAEEDANGTDLKRQEMHARSMAVFEKVKALTDRVRRAQEAYRRLGIDVRGGGGGEDEGLGKGVEGESLSHLRQEVRDLGERLRQIRYVAGEEGL 183
            MEGFAKLQATVQATIETHCPEVARWDKDMSGEGQDEGSRGVLPTLRGAEEALQSAHVRYSRVSHLVDVQNRYRQDCGKLSERVKALYEQAAEEDANGTDLKRQEMHARSMAVFEKVKALTDRVRRAQEAYRRLGIDVRGGGGGEDEGLGKGVEGESLSHLRQEVRDLGERLRQIRYVAGEEGL
Sbjct:    1 MEGFAKLQATVQATIETHCPEVARWDKDMSGEGQDEGSRGVLPTLRGAEEALQSAHVRYSRVSHLVDVQNRYRQDCGKLSERVKALYEQAAEEDANGTDLKRQEMHARSMAVFEKVKALTDRVRRAQEAYRRLGIDVRGGGGGEDEGLGKGVEGESLSHLRQEVRDLGERLRQIRYVAGEEGL 183
The following BLAST results are available for this feature:
BLAST of EWM24546.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585106055|gb|EWM24546.1|1.198e-150100.00hypothetical protein Naga_100260g6 [Nannochloropsi... [more]
gi|553187535|ref|XP_005854631.1|1.933e-127100.00hypothetical protein NGA_0169500 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6143rna6143Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications