EWM24583.1, cds6094 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24583.1 vs. NCBI_GenBank
Match: gi|585106099|gb|EWM24583.1| (methyltransferase type 11 [Nannochloropsis gaditana]) HSP 1 Score: 474.552 bits (1220), Expect = 2.544e-169 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 Query: 1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIFTNP 231 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIFTNP Sbjct: 1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIFTNP 231
BLAST of EWM24583.1 vs. NCBI_GenBank
Match: gi|585106100|gb|EWM24584.1| (methyltransferase type 11 [Nannochloropsis gaditana]) HSP 1 Score: 360.147 bits (923), Expect = 7.199e-125 Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0 Query: 1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKI 181 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHR+ K+ Sbjct: 1 MAEPKEGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRVSIKL 181
BLAST of EWM24583.1 vs. NCBI_GenBank
Match: gi|873230410|emb|CEM11033.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 211.075 bits (536), Expect = 3.451e-65 Identity = 109/232 (46.98%), Postives = 149/232 (64.22%), Query Frame = 0 Query: 6 EGTVTFDRDHYPEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGD----LKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLK--VDMVLLIDVYHHIEYVQTYMTKVREGM---RTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIF 228 E F+ HYP+G+NANF+ S E L+ KY GLF DPE RDIA+ IL+AL G +VD+G+GTGLFL A +G +G +YA E+S GF+ LL + ++EGL+N V + T+ +LP K D+V + DVYHH EY +T++ + + + TG LV+IDFHRIPEKIWS PPEWVL HVRAGQD F+ E+E++GF + +V + ++ENY M F Sbjct: 2 ESPAVFNASHYPDGVNANFVNSTEEQLKEKYGNGSGLFEDPEQRDIAKCKDAILKALRQHCHLSPGCCLVDVGAGTGLFLKDFSAIIGNQGSIYACELSDGFLGLLERLCDEEGLTNVITVKTSDTSLQLPESAKRAADLVFICDVYHHFEYPRTFIRHIADDVIKPDTGL-LVVIDFHRIPEKIWSRPPEWVLDHVRAGQDTFKQEIEESGFEYLSDVEVEGMRENYMMTF 232
BLAST of EWM24583.1 vs. NCBI_GenBank
Match: gi|1180213669|ref|WP_083732515.1| (hypothetical protein [Fuerstia marisgermanicae]) HSP 1 Score: 153.68 bits (387), Expect = 3.030e-41 Identity = 83/217 (38.25%), Postives = 129/217 (59.45%), Query Frame = 0 Query: 17 PEGLNANFLVSDAEALE--AKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIFTNP 231 P+G+N +FL D + E ++ + E+R++ IL+A+G G I D+GSGTGL++ VG +G VYAV+ISP V+ +R++ + E L N +V + +++L D KVD V + D YHH EY ++ + + + ++ G EL+LIDF+RIP EWV++HVRA + F+AE+E AGF F EV +P+ +ENY + F P Sbjct: 179 PDGINDSFLDPDLDPSEWVNRF--------EIESREVFAARGSILKAVGLKPGMSIADIGSGTGLYVGLFSKEVGTEGRVYAVDISPRLVDFVRRRVKAEELHNVEVVQSDEKSAKL-GDRKVDRVFVCDTYHHFEYYESMLASIMDALKPGGELILIDFNRIPGTSR----EWVVNHVRADKQTFQAEVEAAGFEFIDEVRIPEFKENYLLRFRKP 382
BLAST of EWM24583.1 vs. NCBI_GenBank
Match: gi|1140106012|gb|APZ90569.1| (Ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Fuerstia marisgermanicae]) HSP 1 Score: 153.68 bits (387), Expect = 3.862e-39 Identity = 84/215 (39.07%), Postives = 128/215 (59.53%), Query Frame = 0 Query: 17 PEGLNANFLVSDAEALEAKYSGAKGLFTDPETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIFTNP 231 P+G+N +FL D + E F + E+R++ IL+A+G G I D+GSGTGL++ VG +G VYAV+ISP V+ +R++ + E L N +V + +++L D KVD V + D YHH EY ++ + + + ++ G EL+LIDF+RIP EWV++HVRA + F+AE+E AGF F EV +P+ +ENY + F P Sbjct: 778 PDGINDSFLDPDLDPSEWV-----NRF-EIESREVFAARGSILKAVGLKPGMSIADIGSGTGLYVGLFSKEVGTEGRVYAVDISPRLVDFVRRRVKAEELHNVEVVQSDEKSAKL-GDRKVDRVFVCDTYHHFEYYESMLASIMDALKPGGELILIDFNRIPGTSR----EWVVNHVRADKQTFQAEVEAAGFEFIDEVRIPEFKENYLLRFRKP 981
BLAST of EWM24583.1 vs. NCBI_GenBank
Match: gi|499432771|ref|WP_011120235.1| (methyltransferase [Rhodopirellula baltica] >gi|32473470|ref|NP_866464.1| methyltransferase [Rhodopirellula baltica SH 1] >gi|32398150|emb|CAD78245.1| conserved hypothetical protein-putative methyltransferase [Rhodopirellula baltica SH 1]) HSP 1 Score: 139.043 bits (349), Expect = 4.477e-37 Identity = 73/185 (39.46%), Postives = 107/185 (57.84%), Query Frame = 0 Query: 47 ETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIFTNP 231 E+R++ I+ A+ G Q+ D+G+GTGLFL AVG G ++A++I+P F+E + + E + L N + VLG + LP + + + DVYHH EY + + + M+ G +LV+IDF RI K EW + HVRAG++ FR E+E AGFVF+ EV L ENYF+ F P Sbjct: 57 ESREVYAAKDQIVAAMKLKPGDQVADVGTGTGLFLEPFSDAVGKDGWIFAIDIAPKFIERVSRISELKRLGNVTPVLGLPDDICLPPN-SITAAFVCDVYHHFEYPANSLKSIFDAMKPGGQLVVIDFERIEGK----SREWTMGHVRAGKETFRKEIEAAGFVFREEVKLDGFDENYFLRFGRP 236
BLAST of EWM24583.1 vs. NCBI_GenBank
Match: gi|149814202|gb|EDM73815.1| (hypothetical protein PPSIR1_34647 [Plesiocystis pacifica SIR-1]) HSP 1 Score: 139.813 bits (351), Expect = 5.029e-37 Identity = 72/182 (39.56%), Postives = 106/182 (58.24%), Query Frame = 0 Query: 49 RDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIFTN 230 RD+ + I+ A+ G + D+G+GTG FL L A +GP+G +YAV+I+P F+E LR + DEGLSN +V G TT + LP VD++ + DVYHHIEY Y+ + E +R G LV+++F ++P K ++ HVR + AE+ GF E+T L ENY ++FT Sbjct: 96 RDVFEHREAIVAAMALEPGMTVADIGAGTGAFLTTLSAPLGPEGKLYAVDIAPPFLEHLRGRVADEGLSNVEVVEGTTTETGLPPG-SVDVLFVCDVYHHIEYPSAYLRSLHETLRPGGRLVIVEFDKVPGKTSKR----MMKHVRQDKATLLAEVGAEGFSLVEEITSVPLSENYMLVFTR 272
BLAST of EWM24583.1 vs. NCBI_GenBank
Match: gi|495942552|ref|WP_008667131.1| (fibrillarin-like rRNA methylase [Rhodopirellula europaea] >gi|460272466|gb|EMI26535.1| Methyltransferase type 11 [Rhodopirellula europaea SH398]) HSP 1 Score: 138.658 bits (348), Expect = 6.593e-37 Identity = 73/185 (39.46%), Postives = 108/185 (58.38%), Query Frame = 0 Query: 47 ETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIFTNP 231 E+R++ +I+ A+ G Q+ D+G+GTGLF+ AVG G V+A++I+P FV+ + + E + L N + VLG + LP + + + DVYHH EY + + + M+ G +LV+IDF RI K EW + HVRAG++ FR E+E AGFVF+ EV L ENYF+ F P Sbjct: 57 ESREVYAAKDEIVSAMKLKPGDQVADIGTGTGLFVEPFSDAVGKDGWVFAIDIAPKFVQRVSRISELKRLGNVTPVLGLPDDICLPPN-SITAAFVCDVYHHFEYPANSLKSIFDAMKPGGQLVVIDFERIEGK----SREWTMGHVRAGKETFREEIEAAGFVFREEVKLDGFDENYFLRFGRP 236
BLAST of EWM24583.1 vs. NCBI_GenBank
Match: gi|327540115|gb|EGF26709.1| (Methyltransferase type 11 [Rhodopirellula baltica WH47]) HSP 1 Score: 137.887 bits (346), Expect = 8.793e-37 Identity = 72/185 (38.92%), Postives = 107/185 (57.84%), Query Frame = 0 Query: 47 ETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIFTNP 231 E+R++ I+ A+ G Q+ D+G+GTGLF+ AVG G ++A++I+P F+E + + E + L N + VLG + LP + + + DVYHH EY + + + M+ G +LV+IDF RI K EW + HVRAG++ FR E+E AGFVF+ EV L ENYF+ F P Sbjct: 41 ESREVYAAKDQIVAAMKLKPGDQVADVGTGTGLFVEPFSDAVGKDGWIFAIDIAPKFIERVSRISELKRLGNVTPVLGLPDDICLPPN-SITAAFVCDVYHHFEYPANSLKSIFDAMKPGGQLVVIDFERIEGK----SREWTMGHVRAGKETFRKEIEAAGFVFREEVKLDGFDENYFLRFGRP 220
BLAST of EWM24583.1 vs. NCBI_GenBank
Match: gi|495930274|ref|WP_008654853.1| (fibrillarin-like rRNA methylase [Rhodopirellula europaea] >gi|448887583|gb|EMB17948.1| Methyltransferase type 11 [Rhodopirellula europaea 6C]) HSP 1 Score: 138.272 bits (347), Expect = 8.812e-37 Identity = 73/185 (39.46%), Postives = 108/185 (58.38%), Query Frame = 0 Query: 47 ETRDIARNVPDILEALGDLKGKQIVDLGSGTGLFLNFLDAAVGPKGHVYAVEISPGFVELLRKKKEDEGLSNTSIVLGNTTNSELPADLKVDMVLLIDVYHHIEYVQTYMTKVREGMRTGAELVLIDFHRIPEKIWSHPPEWVLSHVRAGQDVFRAELEQAGFVFQREVTLPKLQENYFMIFTNP 231 E+R++ +I+ A+ G Q+ D+G+GTGLF+ AVG G V+A++I+P FV+ + + E + L N + VLG + LP + + + DVYHH EY + + + M+ G +LV+IDF RI K EW + HVRAG++ FR E+E AGFVF+ EV L ENYF+ F P Sbjct: 57 ESREVYAAKDEIVAAMKLKPGDQVADIGTGTGLFVEPFSDAVGKDGWVFAIDIAPKFVQRVSRISELKRLGNVTPVLGLPDDICLPPN-SITAAFVCDVYHHFEYPANSLKSIFDAMKPGGQLVVIDFERIEGK----SREWTMGHVRAGKETFREEIEAAGFVFREEVKLDGFDENYFLRFGRP 236 The following BLAST results are available for this feature:
BLAST of EWM24583.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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