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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100062g24.904.mrna |
Orig protein id | gnl|cribi|Naga_100062g24.904 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002467.1 | supercontig | CM002467.1:585808..588198 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6106 ID=rna6106|Name=rna6106|organism=Nannochloropsis gaditana|type=mRNA|length=1440bp ATGTCTGACATTGAAGAGCTAGCGCAGCTTTTAGGGCAGCCTTTGGAGGA CCTGGACTGGGGGGGAGAGCCCTTTTGCTTCCTGGAGAACGACCACCCGG ACCATGTCCACTTGACGCACAGTGGAGGGGTTCTCCCGCCGCCGCATGTG TCGTCCCACGTCATGTCGGTGCCTAACTGCTCGTCTGGCAATAAGCGGCG TATGACGGAAGCCCTCCAAGTGAACTCGTATCCCTCTAAAACCTGCGGCC CCGTCTTGGTCCCCGCCCCCGCCCCCTCGTCCCTGCCCATTATCCTCAAC AGCAGCAGCAATGAGGACAACGGCAATCTGAACCGCAGGATGGGTGGCAG GAGTATCCGCACCACTTCCAGGCAGCGTATGTCGAGTGCGGTGGAGGAGG AATGCCGTTCGTACCCCACAGGGCCCGGTTCGCACTCGCACGTCACCTCC CCCACCCCCTCTTCGTCCACTTTCCGAGACGATATGGAGCATGACCAATT TGACAGCTCCTCGAGCACGGGAGACGCGTCAGTGACGGCTTCGGCCGGCC AGGCTACCACATCCCGCACCCAAGCAGTGGCTCAACGCATGGAGCGTAAG AAGACCCGGGAGAAGATGCGTCGGTTGGAAGTGAATGACAAGTTCAACGA GCTGATGGAAGCCCTGGCAGAAGTAGAGACGGAAGATCAAACGCCCTTGG AGCAGCAGCAGCAAAAGAAACTGCAGCAGGTCCAAGCCGGGAACGCGGAC AAGGGGAACTTCCGCGTTGATGTGCTTTCCAGGGCGGTGAAGCTGATCAA ACGTTTACATGCCGAACTGAAGGCCGAGCACACAGAAGTGGGGCGTCTTC GCGCGCAGATGGAGCAGATGTGTGCGCCGGCCAAGGAGGAAGAGGGGGTG GACAAGGAGTGGTCGGGGCACGAGGAACGCCAGGCATGCCACCCCCTGTC GGGAGCCTTGTCCGGGCGGGAAGGAGAGAATGGCGTAATGCCCACAGTAT CTTCTCAGACGGATTGCGCGCTTGCTTCGAAGACGCTCAATCATGCCTGG GACGCACCTGGGAACAAGGGGGGCCCGCCGGTGACATGGGTGAGGGTACC GCTGTGGATGCCATCTGGAGGGCACTCAGAGCACACAGAACGCCAGGCCG CTATCGCGCACATGAAAGGTATGATGTTGGATCATCAGGTGCTGCCCGGT GGGAACGCCTTCCCGTTCGCGGCCATGCCGTTCTTGATGCCTTCCCATAA CGATGGAGACATGTCTGCTGTCGTGCCCGGCAATCCAGGGTCGTTTGCAG GTGGCGACGGTAGTCTTACAGGCCAAGCGAGTACCGCAGGTTTTGAAGGA GTGGATGAGGCGCCCACGCATGCACCGAATGGAACTGAAAAAATAGTGTT GGACAGCAAATCAGGAGGAATTGTCTGTTCGATGTTGTAG back to topprotein sequence of rna6106 >rna6106-protein ID=rna6106-protein|Name=rna6106|organism=Nannochloropsis gaditana|type=polypeptide|length=578bp MYATDCPQRGYYDPEAGLRSFGHRAFECDEDDKHRKRRNQTLPVALKWAM IVCFAWGLFVVVVGMASRTSGANVSFFSARARLSESERGLKDKEDSPDFY HEREQENMSQSVQADDRSESPMGGEEFGVGEGAAPQTETESSWEGRMATG RAHLLKGVALALQELIATRGQSPLSALRHDPGPTSPDFSEALSHIEQSAN VLAHSNSGELEIIERDYVNATTVLALLRLHEGNFDEVFRLVGVLQSQVDL DPEEKSLLALLQGYVQEAQGTDKAGMFFALAREYDPKGCHESLLDTSYQP PHYKLSAGIPAERPAYWPALADLFVFRELYTRQHALSPAASWPGTVWSEA AQSDKDRHGANIGWGLHSAGVARAADLFAAQDFVILREFLHPFELAVLER HYQARAQGGDVEYDQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHA YSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQIYSDQAHSQWPIYVDTT ETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTV SSLLLHFVDRHFDFFDYKIARQRQDPSI back to topmRNA from alignment at CM002467.1:585808..588198- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6106 ID=rna6106|Name=rna6106|organism=Nannochloropsis gaditana|type=mRNA|length=2391bp|location=Sequence derived from alignment at CM002467.1:585808..588198- (Nannochloropsis gaditana) GTTCCGTTGCTTAGAAGGCAGTTTGAATCCACTCGCCACATGGGCAAAGT
TTATGTTCAGAGGCTCTTTCACCCCAAAACGATAACAGGAAAAGTAACCA
AGAATGGTTGTTAGATATTTTCGAGTTCATAAACATGGAATACGAATATT
GTGTATCACTCGCCAAATTTCTTGCAAATCGCCACTCTTCGTCGGGTTCT
CCCAGTTGGACATGAATGAAGTGAAGTGTCCTGCATTCCACCACTAAGTC
CCGCTGACTCCATTCGGCACGAGCAGTTTCATTACATGGCTATTCCCTGC
TTATGTCTGAAACACAGGAACGATGTACGCGACGGACTGTCCACAAAGGG
GGTATTATGATCCTGAGGCCGGGTTGCGTAGCTTTGGTCATCGGGCTTTC
GAATGCGACGAAGATGACAAGCACAGAAAGCGGCGCAATCAAACGTTACC
CGTGGCGTTAAAGTGGGCCATGATAGTTTGTTTTGCGTGGGGCTTATTTG
TTGTGGTAGTTGGAATGGCCAGTCGTACCTCTGGAGCTAACGTAAGCTTC
TTCTCTGCGAGGGCCCGGCTATCGGAAAGCGAGCGAGGACTGAAGGACAA
AGAAGATTCACCGGATTTTTATCACGAAAGAGAGCAAGAAAATATGTCAC
AGTCTGTACAAGCGGATGATAGGTCAGAGTCGCCCATGGGTGGGGAGGAA
TTCGGGGTAGGCGAGGGGGCAGCTCCCCAGACAGAGACGGAGTCCTCCTG
GGAGGGCCGTATGGCCACGGGCCGGGCCCACTTGCTGAAAGGCGTTGCTT
TGGCGTTGCAGGAGCTTATAGCGACGCGAGGGCAGTCTCCTCTTTCGGCC
TTACGCCATGACCCGGGGCCCACAAGCCCCGATTTCTCCGAAGCCCTCAG
TCACATCGAGCAATCAGCAAACGTATTGGCTCATTCCAACTCAGGCGAAC
TCGAGATCATCGAGCGAGATTATGTGAATGCCACGACCGTGTTGGCTTTG
CTGAGGCTACATGAGGGCAACTTCGACGAAGTCTTCAGACTCGTGGGGGT
ACTCCAGTCCCAAGTAGACCTCGACCCGGAGGAGAAGTCCCTCTTGGCCT
TGCTGCAGGGCTACGTGCAGGAGGCCCAAGGGACGGACAAGGCAGGAATG
TTTTTTGCCCTGGCTCGCGAATACGATCCAAAGGGATGCCACGAATCGCT
CTTGGACACAAGCTACCAGCCCCCTCACTACAAACTCAGCGCGGGGATCC
CGGCGGAACGCCCCGCCTACTGGCCCGCCTTGGCGGACCTCTTCGTTTTT
CGCGAGCTCTACACGCGGCAGCATGCACTGTCGCCTGCGGCTAGCTGGCC
CGGGACCGTGTGGTCGGAGGCCGCGCAGAGCGATAAGGACCGGCATGGCG
CCAATATTGGCTGGGGGCTCCATTCCGCCGGGGTGGCGCGCGCGGCTGAC
CTCTTCGCAGCACAAGACTTTGTCATCTTGCGAGAATTCTTGCATCCCTT
TGAATTGGCTGTGTTGGAACGGCATTATCAAGCCAGAGCTCAGGGAGGGG
ACGTGGAGTATGATCAACACTTGGGCCGAGCTACTTCGTACCAGGACCGC
GTCGGTAATTTTTTAAATCATCGCCTGACCGGGCTTTTGAACACGATTGG
GAAACGTCCTCTGAAGCATGCCTACTCTTTTTTGTGTCATTATGAGCGAC
GGAATGGGGTAGTCCCTCAATTGAAACCACACACAGACCGGGAAGACAAC
GAGGTGAGTGTTGGAGCTCCTAGGGCACAGACTTAAAGCGAGTATTGCCG
TGTACGTGCTAAGTTAGCGCCGCCATTAATGTCACACGATCCTTAATCTC
TTTTCTGGCGCGTTGATATATTACTTTCGCTCACGTGCATGGATTTAAAC
TTTTCTCACAGGTCACCGTGAGCGCGCAAATTTACAGCGACCAGGCGCAC
TCTCAGTGGCCAATTTACGTCGACACGACCGAAACTCTTCCGGAACACAG
CAGTTGGCGACCAAAACCTTCAGAGGGATCCGCCATCCAATGCGATATCA
AAAACGGAGATGCCTTGGTTTTCTTGGGTCGACGGCACACTCATTACCGG
GAAGCCATGCCTGACGAGTTATCCACTGTCTCGTCTTTGCTTCTGCATTT
TGTTGATAGGCACTTCGATTTTTTCGATTATAAAATCGCTAGGCAACGCC
AGGATCCATCTATATGACCGAGCAATGTAGATTAAAAAGACAAATTATGG
GATGATTTTTTTGTTTTTGTACGTCACGCGTGAGACGGAACCTTTCTTCG
CGCCTTTCAAATGGGCCGACGTCTCCCTTTTCCGTGTGCTCTCCCATCCT
GCACACAGTCTTCACTGCTGCGATCAACAAGGTGTCTCCCA back to topCoding sequence (CDS) from alignment at CM002467.1:585808..588198- >rna6106 ID=rna6106|Name=rna6106|organism=Nannochloropsis gaditana|type=CDS|length=3474bp|location=Sequence derived from alignment at CM002467.1:585808..588198- (Nannochloropsis gaditana) GTCACCGTGAGCGCGCAAATTTACAGCGACCAGGCGCACTCTCAGTGGCC AATTTACGTCGACACGACCGAAACTCTTCCGGAACACAGCAGTTGGCGAC CAAAACCTTCAGAGGGATCCGCCATCCAATGCGATATCAAAAACGGAGAT GCCTTGGTTTTCTTGGGTCGACGGCACACTCATTACCGGGAAGCCATGCC TGACGAGTTATCCACTGTCTCGTCTTTGCTTCTGCATTTTGTTGATAGGC ACTTCGATTTTTTCGATTATAAAATCGCTAGGCAACGCCAGGATCCATCT ATATGAATGTACGCGACGGACTGTCCACAAAGGGGGTATTATGATCCTGA GGCCGGGTTGCGTAGCTTTGGTCATCGGGCTTTCGAATGCGACGAAGATG ACAAGCACAGAAAGCGGCGCAATCAAACGTTACCCGTGGCGTTAAAGTGG GCCATGATAGTTTGTTTTGCGTGGGGCTTATTTGTTGTGGTAGTTGGAAT GGCCAGTCGTACCTCTGGAGCTAACGTAAGCTTCTTCTCTGCGAGGGCCC GGCTATCGGAAAGCGAGCGAGGACTGAAGGACAAAGAAGATTCACCGGAT TTTTATCACGAAAGAGAGCAAGAAAATATGTCACAGTCTGTACAAGCGGA TGATAGGTCAGAGTCGCCCATGGGTGGGGAGGAATTCGGGGTAGGCGAGG GGGCAGCTCCCCAGACAGAGACGGAGTCCTCCTGGGAGGGCCGTATGGCC ACGGGCCGGGCCCACTTGCTGAAAGGCGTTGCTTTGGCGTTGCAGGAGCT TATAGCGACGCGAGGGCAGTCTCCTCTTTCGGCCTTACGCCATGACCCGG GGCCCACAAGCCCCGATTTCTCCGAAGCCCTCAGTCACATCGAGCAATCA GCAAACGTATTGGCTCATTCCAACTCAGGCGAACTCGAGATCATCGAGCG AGATTATGTGAATGCCACGACCGTGTTGGCTTTGCTGAGGCTACATGAGG GCAACTTCGACGAAGTCTTCAGACTCGTGGGGGTACTCCAGTCCCAAGTA GACCTCGACCCGGAGGAGAAGTCCCTCTTGGCCTTGCTGCAGGGCTACGT GCAGGAGGCCCAAGGGACGGACAAGGCAGGAATGTTTTTTGCCCTGGCTC GCGAATACGATCCAAAGGGATGCCACGAATCGCTCTTGGACACAAGCTAC CAGCCCCCTCACTACAAACTCAGCGCGGGGATCCCGGCGGAACGCCCCGC CTACTGGCCCGCCTTGGCGGACCTCTTCGTTTTTCGCGAGCTCTACACGC GGCAGCATGCACTGTCGCCTGCGGCTAGCTGGCCCGGGACCGTGTGGTCG GAGGCCGCGCAGAGCGATAAGGACCGGCATGGCGCCAATATTGGCTGGGG GCTCCATTCCGCCGGGGTGGCGCGCGCGGCTGACCTCTTCGCAGCACAAG ACTTTGTCATCTTGCGAGAATTCTTGCATCCCTTTGAATTGGCTGTGTTG GAACGGCATTATCAAGCCAGAGCTCAGGGAGGGGACGTGGAGTATGATCA ACACTTGGGCCGAGCTACTTCGTACCAGGACCGCGTCGGTAATTTTTTAA ATCATCGCCTGACCGGGCTTTTGAACACGATTGGGAAACGTCCTCTGAAG CATGCCTACTCTTTTTTGTGTCATTATGAGCGACGGAATGGGGTAGTCCC TCAATTGAAACCACACACAGACCGGGAAGACAACGAGGTCACCGTGAGCG CGCAAATTTACAGCGACCAGGCGCACTCTCAGTGGCCAATTTACGTCGAC ACGACCGAAACTCTTCCGGAACACAGCAGTTGGCGACCAAAACCTTCAGA GGGATCCGCCATCCAATGCGATATCAAAAACGGAGATGCCTTGGTTTTCT TGGGTCGACGGCACACTCATTACCGGGAAGCCATGCCTGACGAGTTATCC ACTGTCTCGTCTTTGCTTCTGCATTTTGTTGATAGGCACTTCGATTTTTT CGATTATAAAATCGCTAGGCAACGCCAGGATCCATCTATATGAATGTACG CGACGGACTGTCCACAAAGGGGGTATTATGATCCTGAGGCCGGGTTGCGT AGCTTTGGTCATCGGGCTTTCGAATGCGACGAAGATGACAAGCACAGAAA GCGGCGCAATCAAACGTTACCCGTGGCGTTAAAGTGGGCCATGATAGTTT GTTTTGCGTGGGGCTTATTTGTTGTGGTAGTTGGAATGGCCAGTCGTACC TCTGGAGCTAACGTAAGCTTCTTCTCTGCGAGGGCCCGGCTATCGGAAAG CGAGCGAGGACTGAAGGACAAAGAAGATTCACCGGATTTTTATCACGAAA GAGAGCAAGAAAATATGTCACAGTCTGTACAAGCGGATGATAGGTCAGAG TCGCCCATGGGTGGGGAGGAATTCGGGGTAGGCGAGGGGGCAGCTCCCCA GACAGAGACGGAGTCCTCCTGGGAGGGCCGTATGGCCACGGGCCGGGCCC ACTTGCTGAAAGGCGTTGCTTTGGCGTTGCAGGAGCTTATAGCGACGCGA GGGCAGTCTCCTCTTTCGGCCTTACGCCATGACCCGGGGCCCACAAGCCC CGATTTCTCCGAAGCCCTCAGTCACATCGAGCAATCAGCAAACGTATTGG CTCATTCCAACTCAGGCGAACTCGAGATCATCGAGCGAGATTATGTGAAT GCCACGACCGTGTTGGCTTTGCTGAGGCTACATGAGGGCAACTTCGACGA AGTCTTCAGACTCGTGGGGGTACTCCAGTCCCAAGTAGACCTCGACCCGG AGGAGAAGTCCCTCTTGGCCTTGCTGCAGGGCTACGTGCAGGAGGCCCAA GGGACGGACAAGGCAGGAATGTTTTTTGCCCTGGCTCGCGAATACGATCC AAAGGGATGCCACGAATCGCTCTTGGACACAAGCTACCAGCCCCCTCACT ACAAACTCAGCGCGGGGATCCCGGCGGAACGCCCCGCCTACTGGCCCGCC TTGGCGGACCTCTTCGTTTTTCGCGAGCTCTACACGCGGCAGCATGCACT GTCGCCTGCGGCTAGCTGGCCCGGGACCGTGTGGTCGGAGGCCGCGCAGA GCGATAAGGACCGGCATGGCGCCAATATTGGCTGGGGGCTCCATTCCGCC GGGGTGGCGCGCGCGGCTGACCTCTTCGCAGCACAAGACTTTGTCATCTT GCGAGAATTCTTGCATCCCTTTGAATTGGCTGTGTTGGAACGGCATTATC AAGCCAGAGCTCAGGGAGGGGACGTGGAGTATGATCAACACTTGGGCCGA GCTACTTCGTACCAGGACCGCGTCGGTAATTTTTTAAATCATCGCCTGAC CGGGCTTTTGAACACGATTGGGAAACGTCCTCTGAAGCATGCCTACTCTT TTTTGTGTCATTATGAGCGACGGAATGGGGTAGTCCCTCAATTGAAACCA CACACAGACCGGGAAGACAACGAG back to top
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