EWM24581.1, cds6091 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24581.1 vs. NCBI_GenBank
Match: gi|585106097|gb|EWM24581.1| (hypothetical protein Naga_100062g24 [Nannochloropsis gaditana]) HSP 1 Score: 1199.5 bits (3102), Expect = 0.000e+0 Identity = 578/578 (100.00%), Postives = 578/578 (100.00%), Query Frame = 0
Query: 1 MYATDCPQRGYYDPEAGLRSFGHRAFECDEDDKHRKRRNQTLPVALKWAMIVCFAWGLFVVVVGMASRTSGANVSFFSARARLSESERGLKDKEDSPDFYHEREQENMSQSVQADDRSESPMGGEEFGVGEGAAPQTETESSWEGRMATGRAHLLKGVALALQELIATRGQSPLSALRHDPGPTSPDFSEALSHIEQSANVLAHSNSGELEIIERDYVNATTVLALLRLHEGNFDEVFRLVGVLQSQVDLDPEEKSLLALLQGYVQEAQGTDKAGMFFALAREYDPKGCHESLLDTSYQPPHYKLSAGIPAERPAYWPALADLFVFRELYTRQHALSPAASWPGTVWSEAAQSDKDRHGANIGWGLHSAGVARAADLFAAQDFVILREFLHPFELAVLERHYQARAQGGDVEYDQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQIYSDQAHSQWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTVSSLLLHFVDRHFDFFDYKIARQRQDPSI 578
MYATDCPQRGYYDPEAGLRSFGHRAFECDEDDKHRKRRNQTLPVALKWAMIVCFAWGLFVVVVGMASRTSGANVSFFSARARLSESERGLKDKEDSPDFYHEREQENMSQSVQADDRSESPMGGEEFGVGEGAAPQTETESSWEGRMATGRAHLLKGVALALQELIATRGQSPLSALRHDPGPTSPDFSEALSHIEQSANVLAHSNSGELEIIERDYVNATTVLALLRLHEGNFDEVFRLVGVLQSQVDLDPEEKSLLALLQGYVQEAQGTDKAGMFFALAREYDPKGCHESLLDTSYQPPHYKLSAGIPAERPAYWPALADLFVFRELYTRQHALSPAASWPGTVWSEAAQSDKDRHGANIGWGLHSAGVARAADLFAAQDFVILREFLHPFELAVLERHYQARAQGGDVEYDQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQIYSDQAHSQWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTVSSLLLHFVDRHFDFFDYKIARQRQDPSI
Sbjct: 1 MYATDCPQRGYYDPEAGLRSFGHRAFECDEDDKHRKRRNQTLPVALKWAMIVCFAWGLFVVVVGMASRTSGANVSFFSARARLSESERGLKDKEDSPDFYHEREQENMSQSVQADDRSESPMGGEEFGVGEGAAPQTETESSWEGRMATGRAHLLKGVALALQELIATRGQSPLSALRHDPGPTSPDFSEALSHIEQSANVLAHSNSGELEIIERDYVNATTVLALLRLHEGNFDEVFRLVGVLQSQVDLDPEEKSLLALLQGYVQEAQGTDKAGMFFALAREYDPKGCHESLLDTSYQPPHYKLSAGIPAERPAYWPALADLFVFRELYTRQHALSPAASWPGTVWSEAAQSDKDRHGANIGWGLHSAGVARAADLFAAQDFVILREFLHPFELAVLERHYQARAQGGDVEYDQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQIYSDQAHSQWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTVSSLLLHFVDRHFDFFDYKIARQRQDPSI 578
BLAST of EWM24581.1 vs. NCBI_GenBank
Match: gi|857978454|emb|CEO95868.1| (hypothetical protein PBRA_004581 [Plasmodiophora brassicae]) HSP 1 Score: 157.918 bits (398), Expect = 1.676e-38 Identity = 146/466 (31.33%), Postives = 208/466 (44.64%), Query Frame = 0
Query: 120 SPMGGEEFGVGEGAAPQTETESSWEGRMATGRAHLLKGVALALQELIATRGQSPLSALRHDPGPTSPDFSEALSHIEQSANVLAHSNSGELE-IIERDYVNATTVLALLRLHEGNFDEVFRLVGVLQSQVDLDPEEKSLLALLQGYVQEAQG-TDKAGMFFALAREYDPKGCHESLLDTSYQPPHYKLSAGIPAERPAYWPALADLFVFRELYTRQHALSPAASWPGTVWSEAAQSDKDRHGANIGWGLHSAGVARAADLFAAQDFVILREFLHPFELAVLERHYQARAQGGDVE-YDQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLC-HYERRNG-VVPQLKPHTDREDNEVTVSAQIY--SDQAHSQWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTVSSLLLHFVDRHFDFFDYKIARQRQDPSI 578
+PMG + V +T + E M RA A+ L L A L + + G PD E L +Q + A S + E ++ R ALL G+ RL+ + P K+ L GYV E G A F+ ARE P HE+ Y IPA P Y L L +R+ Y +A +S S S D G + + A D+ DFV+LR FL P+E ++ Y ++ +D++L R +Y DR+ ++L R T +N I P+KH YSFLC H N P LKPH DREDNE T+S Q++ + + WPI+V + W+ KP +++ + +GDA++F GRRH H+R+ MP + SSLLLH+V HFD+ D+K RQ QDP+I
Sbjct: 48 NPMG--QLAVVASERARTSPTAYAERLMKKYRARKDYRAAMQLGRLYA------LQLIESNKGSELPDDEELLRLAQQWFDEAAKLGSDQCEPLLSR---------ALLHFVIGDDKAAKRLLRKVAEFAS--PACKAESDLYNGYVLEFDGDAPNAKAKFSSAREELP-SIHENFYSRVYA----HTDPVIPA--PKYEKRLRLLSAYRDFYHGFYADRNQSSAREFNPSHVMASGVDIRGGTLN-------LDNANDVLNKNDFVVLRAFLTPWETRTVQALYADLIDDKTIDNFDENLSRTITYNDRISHWLGQRYTDAVNGIVGEPVKHVYSFLCWHSPGPNPHNRPVLKPHIDREDNEFTISIQLHYVNTEGDPSWPIWVHVPTQEDTRAGWKDKPPRSESVEVRMLDGDAILFRGRRHVHWRDEMPVSGLSFSSLLLHYVHEHFDWRDFKYVRQAQDPAI 480
BLAST of EWM24581.1 vs. NCBI_GenBank
Match: gi|923138671|ref|XP_013762800.1| (hypothetical protein AMSG_00526 [Thecamonas trahens ATCC 50062] >gi|906555506|gb|KNC48749.1| hypothetical protein AMSG_00526 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 145.206 bits (365), Expect = 9.286e-34 Identity = 93/239 (38.91%), Postives = 124/239 (51.88%), Query Frame = 0
Query: 353 SDKDRHGANIGW-GLHSAGVARAADL---FAAQDFVI--LREFLHPFELAVLERHYQARAQGGDVEY-DQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYE---RRNGVVPQLKPHTDREDNEVTVSAQIY---SDQAHSQWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTVSSLLLHFVDRHFDFFDYKIARQRQDPSI 578
SD +IGW GL + +R A A DF L+ L P+EL +L +Y + G V + D GR T+ +RVG FLN L L + RP+K AYSF Y R L PHTDREDN+ T S Q+ A + WP+YVD ETLP +SWR +P + + +GD L+F GR H H+R +P +S V++++LH+VD FD YK RQ DP I
Sbjct: 296 SDTTAEPVSIGWSGLATTNASRVAGAGAELAGNDFGYGHLQHVLSPYELTLLVEYYDSCVDGEFVVWEDLEQGRRTAKSERVGYFLNVALAPLAEAVLSRPVKVAYSFYSDYAIDPRLGQPAHALFPHTDREDNQYTFSIQVAFQGEPGADAHWPLYVDQLETLPMRASWRQQPDRSTTTAVYLVSGDGLLFQGRSHIHFRSPLPKGVSRVANIILHYVDSDFDLRHYK-ERQWIDPDI 533
BLAST of EWM24581.1 vs. NCBI_GenBank
Match: gi|569390644|gb|ETO17811.1| (hypothetical protein RFI_19497, partial [Reticulomyxa filosa]) HSP 1 Score: 105.531 bits (262), Expect = 1.014e-21 Identity = 73/216 (33.80%), Postives = 106/216 (49.07%), Query Frame = 0
Query: 366 LHSAGVARAADLFAAQDFVILREFLHPFELAVLERHYQARAQGGDVE----YDQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYE-RRNGVVPQLKPHTDREDNEVTVSAQIYSDQAHSQ-WPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTVSSLLLHFVDRHFDFFDYKIARQRQD 575
L + + A F+ + V+L+ L P E L +++ + G E YD L R+ DRV L L+ I RP+K AYSFLC Y+ +++ P L HTDREDNE T S + D S +PIY + ++ P ++ GDAL+F GR+H H+R M +L T ++L H+V FDF D+K QRQ+
Sbjct: 59 LGTRNIENARQEFSRKGAVLLKNILSPLECEFLSKYFADAIRRGYPESVADYDSGLVRSIFNSDRVSFLWLTELNDLMTRIVGRPVKKAYSFLCGYKTQQHNRRPWLLGHTDREDNEFTFSITLTHDGPKSPPFPIYAHKKRMVSRRKNY-AFPGFDQVLEFVNDIGDALIFKGRQHIHFRNDMDPKLDTYWTILFHYVPLEFDFVDFK---QRQE 270
BLAST of EWM24581.1 vs. NCBI_GenBank
Match: gi|913621260|gb|AKV03793.1| (hypothetical protein AKJ09_10456 [Labilithrix luteola]) HSP 1 Score: 80.1073 bits (196), Expect = 2.244e-12 Identity = 70/254 (27.56%), Postives = 112/254 (44.09%), Query Frame = 0
Query: 318 PALADLFVFRELYTRQHALSPAASWPGTVWSEAAQSDKDRHGANIGWGLHSAGVARAADLFAA---QDFVILREFLHPFELAVLERHYQARAQGGDVEYD--QHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQIYSD---QAHSQWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTVSSLLLHFVDRHFD 563
P+ A+ + E+ R H + P+ WSE+ A AR D A+ +FV++R+ L+P +L ++ R+Y+A + G D Q R+ + + V F++ +L LLN I +P+K +Y +L YE G V L HTDR +S +D A + WPIY++ G A + GD +++ G H+R+A PD T + HFVD F+
Sbjct: 194 PSRANTILRSEILRRAHVVVPSD------WSESR---------------GKAWEARVRDCRASLERDEFVVIRDLLNPIQLQLMRRYYRAASLAGAFMLDDGQVAKRSWCHNEDVARFVHSQLVDLLNRIVPQPIKASYCYLGLYE--PGAV--LARHTDRAQCVWNLSVPFDADPETDADTAWPIYLEV---------------RGEARPVRLGIGDGVLYRGTDLPHWRDAQPDGHRT-TVCFFHFVDETFE 406
BLAST of EWM24581.1 vs. NCBI_GenBank
Match: gi|1098269909|emb|SFP52070.1| (hypothetical protein SAMN03159417_02293 [Ralstonia sp. NFACC01]) HSP 1 Score: 72.4034 bits (176), Expect = 2.259e-10 Identity = 61/197 (30.96%), Postives = 105/197 (53.30%), Query Frame = 0
Query: 372 ARAADLFAAQDFVILREFLHPFELAVLERHYQARAQGGDVEY--DQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQI-YSDQA--HSQWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPD-ELSTVSSLLLHFVDRHF 562
ARA+ FA +++ ++ + LHP+E+AVL R+ + + G + + Q R ++ D + L RLT L++ + P+K +Y++L Y + G V L H DR E +++ + Y+ + + WPI + LP+ + + GDALV+ G R H+REA+P+ +ST SLLLH+V+ +F
Sbjct: 115 ARAS--FARENYGVVTDALHPYEVAVLRRYLRHGVRSGAIRFGDPQVPRRYRAHNDPMLRTLQARLTPLISHVVGAPVKPSYAYLAAYTQ--GAV--LHRHVDRPQCEYSLTIAVDYTPEPTLEASWPIRLG----LPD-----------AEVLVYQSLGDALVYAGPRVVHFREALPEGHIST--SLLLHYVNLNF 288
BLAST of EWM24581.1 vs. NCBI_GenBank
Match: gi|640546535|ref|WP_024978670.1| (hypothetical protein [Ralstonia pickettii]) HSP 1 Score: 69.707 bits (169), Expect = 1.873e-9 Identity = 60/197 (30.46%), Postives = 104/197 (52.79%), Query Frame = 0
Query: 372 ARAADLFAAQDFVILREFLHPFELAVLERHYQARAQGGDVEY--DQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQI-YSDQA--HSQWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPD-ELSTVSSLLLHFVDRHF 562
ARA+ FA + + ++ + LHP+E+AV+ R+ + + G + + Q R ++ D + L RLT L++ + P+K +Y++L Y + G V L H DR E +++ + Y+ + + WPI + LP+ + + GDALV+ G R H+REA+P+ +ST SLLLH+V+ +F
Sbjct: 111 ARAS--FARESYGVVTDALHPYEVAVVRRYLRHGVRTGAIRFGDPQVPRRYRAHNDPMLRTLQARLTPLISHVVGVPVKPSYAYLAAYTQ--GAV--LHRHVDRPQCEYSLTIAVDYTPEPTLEASWPIRLG----LPD-----------AEVLVYQSLGDALVYAGPRVVHFREALPEGHIST--SLLLHYVNLNF 284
BLAST of EWM24581.1 vs. NCBI_GenBank
Match: gi|653768928|ref|WP_027679067.1| (hypothetical protein [Ralstonia sp. UNC404CL21Col]) HSP 1 Score: 69.3218 bits (168), Expect = 2.494e-9 Identity = 60/197 (30.46%), Postives = 103/197 (52.28%), Query Frame = 0
Query: 372 ARAADLFAAQDFVILREFLHPFELAVLERHYQARAQGGDVEY--DQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQI-YSDQA--HSQWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPD-ELSTVSSLLLHFVDRHF 562
ARA+ FA + + ++ + LHP+E+A + R+ + + G + + Q R ++ D V L RLT L++ + P+K +Y++L Y + G V L H DR E +++ + Y+ + + WPI + LP+ + + GDALV+ G R H+REA+P+ +ST SLLLH+V+ +F
Sbjct: 111 ARAS--FARESYGVVTDALHPYEVAAVRRYLRHGVRTGAIRFGDPQVPRRYRAHNDPVLQTLQTRLTPLISHVVGVPVKPSYAYLAAYTQ--GAV--LHRHVDRPQCEYSLTIAVDYTPEPTLEASWPIRLG----LPD-----------AEVLVYQSLGDALVYAGPRVVHFREALPEGHIST--SLLLHYVNLNF 284
BLAST of EWM24581.1 vs. NCBI_GenBank
Match: gi|1131010828|ref|WP_075772039.1| (hypothetical protein [Rhodocista sp. MIMtkB3]) HSP 1 Score: 66.6254 bits (161), Expect = 4.158e-8 Identity = 56/191 (29.32%), Postives = 80/191 (41.88%), Query Frame = 0
Query: 378 FAAQDFVILREFLHPFELAVLERHYQARAQGGDVEYDQHLG-RATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQI---YSDQAHSQWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTVSSLLLHFVDRHFDF 564
AAQ FV++ L P LA + + A G E+ R T + D VG H + RPL +Y+FL Y + L H DR E T+S I WP+ + RP P + + ++ + GD +VF GRR H R +P E ++LLLH+V H D+
Sbjct: 199 LAAQGFVLVPGLLPPAHLAAWQAYADALVAAGLTEHSAKAADRDTYHGDPVGTLFLHLFRPAAEALAGRPLVPSYAFLSAYRAAS----ALDEHLDRPPCEYTLSLHIDHRPRPDGPVPWPLRI------------RPGP-DTAPVELRCRLGDGVVFRGRRLPHSRPRLP-EGDRSTTLLLHYV--HPDY 369
BLAST of EWM24581.1 vs. NCBI_GenBank
Match: gi|1052386604|emb|SCG03510.1| (hypothetical protein GA0115259_108382 [Streptomyces sp. MnatMP-M17]) HSP 1 Score: 66.2402 bits (160), Expect = 5.630e-8 Identity = 55/188 (29.26%), Postives = 86/188 (45.74%), Query Frame = 0
Query: 380 AQDFVILREFLHPFELAVLERHYQ-ARAQG---GDVEYDQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHAYSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQIYSDQAHS-QWPIYVDTTETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTVSSLLLHFVDRHF 562
A D +LR P +A L RH++ RA+G D E + R Y D V F+ +LTG + PL+ +Y++ Y R G L+ H DR VS + +D + WP ++ T +H+ ++ GDA+V+ G H H+R+ +P + V+ LLH+VD F
Sbjct: 226 ADDVAVLRGTFPPLFVAALRRHFRRMRAEGYFSTDREQVRDGRRDGMYCDAVTLFVQQQLTGAVARWAGSPLRPSYTWAVTY--RPGAA--LERHRDRPQCRWNVSLCVDTDPGDAGPWPFHIRTGTR--QHT-------------VELGMGDAVVYSGTDHEHWRDPLPPD-RVVTMCLLHYVDPDF 393 The following BLAST results are available for this feature:
BLAST of EWM24581.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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