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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100062g24.904.mrna |
| Orig protein id | gnl|cribi|Naga_100062g24.904 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:585808..588198 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6106 ID=rna6106|Name=rna6106|organism=Nannochloropsis gaditana|type=mRNA|length=1440bp
ATGTCTGACATTGAAGAGCTAGCGCAGCTTTTAGGGCAGCCTTTGGAGGA
CCTGGACTGGGGGGGAGAGCCCTTTTGCTTCCTGGAGAACGACCACCCGG
ACCATGTCCACTTGACGCACAGTGGAGGGGTTCTCCCGCCGCCGCATGTG
TCGTCCCACGTCATGTCGGTGCCTAACTGCTCGTCTGGCAATAAGCGGCG
TATGACGGAAGCCCTCCAAGTGAACTCGTATCCCTCTAAAACCTGCGGCC
CCGTCTTGGTCCCCGCCCCCGCCCCCTCGTCCCTGCCCATTATCCTCAAC
AGCAGCAGCAATGAGGACAACGGCAATCTGAACCGCAGGATGGGTGGCAG
GAGTATCCGCACCACTTCCAGGCAGCGTATGTCGAGTGCGGTGGAGGAGG
AATGCCGTTCGTACCCCACAGGGCCCGGTTCGCACTCGCACGTCACCTCC
CCCACCCCCTCTTCGTCCACTTTCCGAGACGATATGGAGCATGACCAATT
TGACAGCTCCTCGAGCACGGGAGACGCGTCAGTGACGGCTTCGGCCGGCC
AGGCTACCACATCCCGCACCCAAGCAGTGGCTCAACGCATGGAGCGTAAG
AAGACCCGGGAGAAGATGCGTCGGTTGGAAGTGAATGACAAGTTCAACGA
GCTGATGGAAGCCCTGGCAGAAGTAGAGACGGAAGATCAAACGCCCTTGG
AGCAGCAGCAGCAAAAGAAACTGCAGCAGGTCCAAGCCGGGAACGCGGAC
AAGGGGAACTTCCGCGTTGATGTGCTTTCCAGGGCGGTGAAGCTGATCAA
ACGTTTACATGCCGAACTGAAGGCCGAGCACACAGAAGTGGGGCGTCTTC
GCGCGCAGATGGAGCAGATGTGTGCGCCGGCCAAGGAGGAAGAGGGGGTG
GACAAGGAGTGGTCGGGGCACGAGGAACGCCAGGCATGCCACCCCCTGTC
GGGAGCCTTGTCCGGGCGGGAAGGAGAGAATGGCGTAATGCCCACAGTAT
CTTCTCAGACGGATTGCGCGCTTGCTTCGAAGACGCTCAATCATGCCTGG
GACGCACCTGGGAACAAGGGGGGCCCGCCGGTGACATGGGTGAGGGTACC
GCTGTGGATGCCATCTGGAGGGCACTCAGAGCACACAGAACGCCAGGCCG
CTATCGCGCACATGAAAGGTATGATGTTGGATCATCAGGTGCTGCCCGGT
GGGAACGCCTTCCCGTTCGCGGCCATGCCGTTCTTGATGCCTTCCCATAA
CGATGGAGACATGTCTGCTGTCGTGCCCGGCAATCCAGGGTCGTTTGCAG
GTGGCGACGGTAGTCTTACAGGCCAAGCGAGTACCGCAGGTTTTGAAGGA
GTGGATGAGGCGCCCACGCATGCACCGAATGGAACTGAAAAAATAGTGTT
GGACAGCAAATCAGGAGGAATTGTCTGTTCGATGTTGTAG back to topprotein sequence of rna6106 >rna6106-protein ID=rna6106-protein|Name=rna6106|organism=Nannochloropsis gaditana|type=polypeptide|length=578bp
MYATDCPQRGYYDPEAGLRSFGHRAFECDEDDKHRKRRNQTLPVALKWAM
IVCFAWGLFVVVVGMASRTSGANVSFFSARARLSESERGLKDKEDSPDFY
HEREQENMSQSVQADDRSESPMGGEEFGVGEGAAPQTETESSWEGRMATG
RAHLLKGVALALQELIATRGQSPLSALRHDPGPTSPDFSEALSHIEQSAN
VLAHSNSGELEIIERDYVNATTVLALLRLHEGNFDEVFRLVGVLQSQVDL
DPEEKSLLALLQGYVQEAQGTDKAGMFFALAREYDPKGCHESLLDTSYQP
PHYKLSAGIPAERPAYWPALADLFVFRELYTRQHALSPAASWPGTVWSEA
AQSDKDRHGANIGWGLHSAGVARAADLFAAQDFVILREFLHPFELAVLER
HYQARAQGGDVEYDQHLGRATSYQDRVGNFLNHRLTGLLNTIGKRPLKHA
YSFLCHYERRNGVVPQLKPHTDREDNEVTVSAQIYSDQAHSQWPIYVDTT
ETLPEHSSWRPKPSEGSAIQCDIKNGDALVFLGRRHTHYREAMPDELSTV
SSLLLHFVDRHFDFFDYKIARQRQDPSI back to topmRNA from alignment at CM002467.1:585808..588198- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6106 ID=rna6106|Name=rna6106|organism=Nannochloropsis gaditana|type=mRNA|length=2391bp|location=Sequence derived from alignment at CM002467.1:585808..588198- (Nannochloropsis gaditana)
GTTCCGTTGCTTAGAAGGCAGTTTGAATCCACTCGCCACATGGGCAAAGT
TTATGTTCAGAGGCTCTTTCACCCCAAAACGATAACAGGAAAAGTAACCA
AGAATGGTTGTTAGATATTTTCGAGTTCATAAACATGGAATACGAATATT
GTGTATCACTCGCCAAATTTCTTGCAAATCGCCACTCTTCGTCGGGTTCT
CCCAGTTGGACATGAATGAAGTGAAGTGTCCTGCATTCCACCACTAAGTC
CCGCTGACTCCATTCGGCACGAGCAGTTTCATTACATGGCTATTCCCTGC
TTATGTCTGAAACACAGGAACGATGTACGCGACGGACTGTCCACAAAGGG
GGTATTATGATCCTGAGGCCGGGTTGCGTAGCTTTGGTCATCGGGCTTTC
GAATGCGACGAAGATGACAAGCACAGAAAGCGGCGCAATCAAACGTTACC
CGTGGCGTTAAAGTGGGCCATGATAGTTTGTTTTGCGTGGGGCTTATTTG
TTGTGGTAGTTGGAATGGCCAGTCGTACCTCTGGAGCTAACGTAAGCTTC
TTCTCTGCGAGGGCCCGGCTATCGGAAAGCGAGCGAGGACTGAAGGACAA
AGAAGATTCACCGGATTTTTATCACGAAAGAGAGCAAGAAAATATGTCAC
AGTCTGTACAAGCGGATGATAGGTCAGAGTCGCCCATGGGTGGGGAGGAA
TTCGGGGTAGGCGAGGGGGCAGCTCCCCAGACAGAGACGGAGTCCTCCTG
GGAGGGCCGTATGGCCACGGGCCGGGCCCACTTGCTGAAAGGCGTTGCTT
TGGCGTTGCAGGAGCTTATAGCGACGCGAGGGCAGTCTCCTCTTTCGGCC
TTACGCCATGACCCGGGGCCCACAAGCCCCGATTTCTCCGAAGCCCTCAG
TCACATCGAGCAATCAGCAAACGTATTGGCTCATTCCAACTCAGGCGAAC
TCGAGATCATCGAGCGAGATTATGTGAATGCCACGACCGTGTTGGCTTTG
CTGAGGCTACATGAGGGCAACTTCGACGAAGTCTTCAGACTCGTGGGGGT
ACTCCAGTCCCAAGTAGACCTCGACCCGGAGGAGAAGTCCCTCTTGGCCT
TGCTGCAGGGCTACGTGCAGGAGGCCCAAGGGACGGACAAGGCAGGAATG
TTTTTTGCCCTGGCTCGCGAATACGATCCAAAGGGATGCCACGAATCGCT
CTTGGACACAAGCTACCAGCCCCCTCACTACAAACTCAGCGCGGGGATCC
CGGCGGAACGCCCCGCCTACTGGCCCGCCTTGGCGGACCTCTTCGTTTTT
CGCGAGCTCTACACGCGGCAGCATGCACTGTCGCCTGCGGCTAGCTGGCC
CGGGACCGTGTGGTCGGAGGCCGCGCAGAGCGATAAGGACCGGCATGGCG
CCAATATTGGCTGGGGGCTCCATTCCGCCGGGGTGGCGCGCGCGGCTGAC
CTCTTCGCAGCACAAGACTTTGTCATCTTGCGAGAATTCTTGCATCCCTT
TGAATTGGCTGTGTTGGAACGGCATTATCAAGCCAGAGCTCAGGGAGGGG
ACGTGGAGTATGATCAACACTTGGGCCGAGCTACTTCGTACCAGGACCGC
GTCGGTAATTTTTTAAATCATCGCCTGACCGGGCTTTTGAACACGATTGG
GAAACGTCCTCTGAAGCATGCCTACTCTTTTTTGTGTCATTATGAGCGAC
GGAATGGGGTAGTCCCTCAATTGAAACCACACACAGACCGGGAAGACAAC
GAGGTGAGTGTTGGAGCTCCTAGGGCACAGACTTAAAGCGAGTATTGCCG
TGTACGTGCTAAGTTAGCGCCGCCATTAATGTCACACGATCCTTAATCTC
TTTTCTGGCGCGTTGATATATTACTTTCGCTCACGTGCATGGATTTAAAC
TTTTCTCACAGGTCACCGTGAGCGCGCAAATTTACAGCGACCAGGCGCAC
TCTCAGTGGCCAATTTACGTCGACACGACCGAAACTCTTCCGGAACACAG
CAGTTGGCGACCAAAACCTTCAGAGGGATCCGCCATCCAATGCGATATCA
AAAACGGAGATGCCTTGGTTTTCTTGGGTCGACGGCACACTCATTACCGG
GAAGCCATGCCTGACGAGTTATCCACTGTCTCGTCTTTGCTTCTGCATTT
TGTTGATAGGCACTTCGATTTTTTCGATTATAAAATCGCTAGGCAACGCC
AGGATCCATCTATATGACCGAGCAATGTAGATTAAAAAGACAAATTATGG
GATGATTTTTTTGTTTTTGTACGTCACGCGTGAGACGGAACCTTTCTTCG
CGCCTTTCAAATGGGCCGACGTCTCCCTTTTCCGTGTGCTCTCCCATCCT
GCACACAGTCTTCACTGCTGCGATCAACAAGGTGTCTCCCA back to topCoding sequence (CDS) from alignment at CM002467.1:585808..588198- >rna6106 ID=rna6106|Name=rna6106|organism=Nannochloropsis gaditana|type=CDS|length=3474bp|location=Sequence derived from alignment at CM002467.1:585808..588198- (Nannochloropsis gaditana)
GTCACCGTGAGCGCGCAAATTTACAGCGACCAGGCGCACTCTCAGTGGCC
AATTTACGTCGACACGACCGAAACTCTTCCGGAACACAGCAGTTGGCGAC
CAAAACCTTCAGAGGGATCCGCCATCCAATGCGATATCAAAAACGGAGAT
GCCTTGGTTTTCTTGGGTCGACGGCACACTCATTACCGGGAAGCCATGCC
TGACGAGTTATCCACTGTCTCGTCTTTGCTTCTGCATTTTGTTGATAGGC
ACTTCGATTTTTTCGATTATAAAATCGCTAGGCAACGCCAGGATCCATCT
ATATGAATGTACGCGACGGACTGTCCACAAAGGGGGTATTATGATCCTGA
GGCCGGGTTGCGTAGCTTTGGTCATCGGGCTTTCGAATGCGACGAAGATG
ACAAGCACAGAAAGCGGCGCAATCAAACGTTACCCGTGGCGTTAAAGTGG
GCCATGATAGTTTGTTTTGCGTGGGGCTTATTTGTTGTGGTAGTTGGAAT
GGCCAGTCGTACCTCTGGAGCTAACGTAAGCTTCTTCTCTGCGAGGGCCC
GGCTATCGGAAAGCGAGCGAGGACTGAAGGACAAAGAAGATTCACCGGAT
TTTTATCACGAAAGAGAGCAAGAAAATATGTCACAGTCTGTACAAGCGGA
TGATAGGTCAGAGTCGCCCATGGGTGGGGAGGAATTCGGGGTAGGCGAGG
GGGCAGCTCCCCAGACAGAGACGGAGTCCTCCTGGGAGGGCCGTATGGCC
ACGGGCCGGGCCCACTTGCTGAAAGGCGTTGCTTTGGCGTTGCAGGAGCT
TATAGCGACGCGAGGGCAGTCTCCTCTTTCGGCCTTACGCCATGACCCGG
GGCCCACAAGCCCCGATTTCTCCGAAGCCCTCAGTCACATCGAGCAATCA
GCAAACGTATTGGCTCATTCCAACTCAGGCGAACTCGAGATCATCGAGCG
AGATTATGTGAATGCCACGACCGTGTTGGCTTTGCTGAGGCTACATGAGG
GCAACTTCGACGAAGTCTTCAGACTCGTGGGGGTACTCCAGTCCCAAGTA
GACCTCGACCCGGAGGAGAAGTCCCTCTTGGCCTTGCTGCAGGGCTACGT
GCAGGAGGCCCAAGGGACGGACAAGGCAGGAATGTTTTTTGCCCTGGCTC
GCGAATACGATCCAAAGGGATGCCACGAATCGCTCTTGGACACAAGCTAC
CAGCCCCCTCACTACAAACTCAGCGCGGGGATCCCGGCGGAACGCCCCGC
CTACTGGCCCGCCTTGGCGGACCTCTTCGTTTTTCGCGAGCTCTACACGC
GGCAGCATGCACTGTCGCCTGCGGCTAGCTGGCCCGGGACCGTGTGGTCG
GAGGCCGCGCAGAGCGATAAGGACCGGCATGGCGCCAATATTGGCTGGGG
GCTCCATTCCGCCGGGGTGGCGCGCGCGGCTGACCTCTTCGCAGCACAAG
ACTTTGTCATCTTGCGAGAATTCTTGCATCCCTTTGAATTGGCTGTGTTG
GAACGGCATTATCAAGCCAGAGCTCAGGGAGGGGACGTGGAGTATGATCA
ACACTTGGGCCGAGCTACTTCGTACCAGGACCGCGTCGGTAATTTTTTAA
ATCATCGCCTGACCGGGCTTTTGAACACGATTGGGAAACGTCCTCTGAAG
CATGCCTACTCTTTTTTGTGTCATTATGAGCGACGGAATGGGGTAGTCCC
TCAATTGAAACCACACACAGACCGGGAAGACAACGAGGTCACCGTGAGCG
CGCAAATTTACAGCGACCAGGCGCACTCTCAGTGGCCAATTTACGTCGAC
ACGACCGAAACTCTTCCGGAACACAGCAGTTGGCGACCAAAACCTTCAGA
GGGATCCGCCATCCAATGCGATATCAAAAACGGAGATGCCTTGGTTTTCT
TGGGTCGACGGCACACTCATTACCGGGAAGCCATGCCTGACGAGTTATCC
ACTGTCTCGTCTTTGCTTCTGCATTTTGTTGATAGGCACTTCGATTTTTT
CGATTATAAAATCGCTAGGCAACGCCAGGATCCATCTATATGAATGTACG
CGACGGACTGTCCACAAAGGGGGTATTATGATCCTGAGGCCGGGTTGCGT
AGCTTTGGTCATCGGGCTTTCGAATGCGACGAAGATGACAAGCACAGAAA
GCGGCGCAATCAAACGTTACCCGTGGCGTTAAAGTGGGCCATGATAGTTT
GTTTTGCGTGGGGCTTATTTGTTGTGGTAGTTGGAATGGCCAGTCGTACC
TCTGGAGCTAACGTAAGCTTCTTCTCTGCGAGGGCCCGGCTATCGGAAAG
CGAGCGAGGACTGAAGGACAAAGAAGATTCACCGGATTTTTATCACGAAA
GAGAGCAAGAAAATATGTCACAGTCTGTACAAGCGGATGATAGGTCAGAG
TCGCCCATGGGTGGGGAGGAATTCGGGGTAGGCGAGGGGGCAGCTCCCCA
GACAGAGACGGAGTCCTCCTGGGAGGGCCGTATGGCCACGGGCCGGGCCC
ACTTGCTGAAAGGCGTTGCTTTGGCGTTGCAGGAGCTTATAGCGACGCGA
GGGCAGTCTCCTCTTTCGGCCTTACGCCATGACCCGGGGCCCACAAGCCC
CGATTTCTCCGAAGCCCTCAGTCACATCGAGCAATCAGCAAACGTATTGG
CTCATTCCAACTCAGGCGAACTCGAGATCATCGAGCGAGATTATGTGAAT
GCCACGACCGTGTTGGCTTTGCTGAGGCTACATGAGGGCAACTTCGACGA
AGTCTTCAGACTCGTGGGGGTACTCCAGTCCCAAGTAGACCTCGACCCGG
AGGAGAAGTCCCTCTTGGCCTTGCTGCAGGGCTACGTGCAGGAGGCCCAA
GGGACGGACAAGGCAGGAATGTTTTTTGCCCTGGCTCGCGAATACGATCC
AAAGGGATGCCACGAATCGCTCTTGGACACAAGCTACCAGCCCCCTCACT
ACAAACTCAGCGCGGGGATCCCGGCGGAACGCCCCGCCTACTGGCCCGCC
TTGGCGGACCTCTTCGTTTTTCGCGAGCTCTACACGCGGCAGCATGCACT
GTCGCCTGCGGCTAGCTGGCCCGGGACCGTGTGGTCGGAGGCCGCGCAGA
GCGATAAGGACCGGCATGGCGCCAATATTGGCTGGGGGCTCCATTCCGCC
GGGGTGGCGCGCGCGGCTGACCTCTTCGCAGCACAAGACTTTGTCATCTT
GCGAGAATTCTTGCATCCCTTTGAATTGGCTGTGTTGGAACGGCATTATC
AAGCCAGAGCTCAGGGAGGGGACGTGGAGTATGATCAACACTTGGGCCGA
GCTACTTCGTACCAGGACCGCGTCGGTAATTTTTTAAATCATCGCCTGAC
CGGGCTTTTGAACACGATTGGGAAACGTCCTCTGAAGCATGCCTACTCTT
TTTTGTGTCATTATGAGCGACGGAATGGGGTAGTCCCTCAATTGAAACCA
CACACAGACCGGGAAGACAACGAG back to top
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