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Properties
| Property Name | Value |
|---|
| Product | galactose-binding protein |
| Orig transcript id | gnl|cribi|Naga_100117g9.411.mrna |
| Orig protein id | gnl|cribi|Naga_100117g9.411 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:473229..476683 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6063 ID=rna6063|Name=rna6063|organism=Nannochloropsis gaditana|type=mRNA|length=3183bp
TCTGCTACAACCCGGGCTCCGACGGGCTGCCAAACAAGAATATGCAGTTT
AAGACTGTGCTTCAGGAGGCAGACGCGCCCGAAACCTCACAACCCTTTTT
TTAAAACTTGCAGGTCATGCATGTGGTAGACACGTGTCATAAATACGGTT
TCGCAGGAGTTTTGTGCCTGCTCAACCTTTCGTCTGAGGCCATGGCATGG
AGGCCAACAGGGCCTGTATACCGACAAGCTTCGCAATGGTCAACGTGATG
CAGTTCTAGTGTGAAAAAAATGTCAAATTGGCAGAGAGTGGGGAGACGCG
GCAAAGCTGAGAGGAGAGCAATACAGCACGATGTGCCTCGGCCATCTGAC
GAAACTCGGGAGCCCCTTTCCGCCATCATGTCCCGGAGGCTTCGAGAGGA
TCCCTGCTATGACGAGGAAGATAAGCTAGGCAGCGTACTGCAGACATCCA
TCTGGAGCCAGAGCAGTGATCCTCAGCTTCAGCGGGCGATCGAGGAGTCA
CTGAGGTCGGGGCTGCCTGAGGAGACCCACATGCCAGGCCCCCGCACAAC
GTGGCCCAGGGCCGTGCTGAAAGCCGAAACTGATGAGGTGGAGCAGCTAG
CTACCGGTAAGGAAGAAGATGCAACCGGATGGGCGGCTCTTTCGGTAGAG
AATGTCGACCCTAGCCCCGCGGGCGGGGACGAGGAGGAGGAAATGGTGGC
GCTAGCCCTGAAGGCGTCAATGGAGCTGAGAGAACAGGAGGCTCATCGGT
CCTGGAATGAGACCAACCACGCCGAAGAAGCGCATACGGCTGAGGGACCT
AAGCGAAGGGGGTCAAGAGATACGCTCGGGCATACCATCGCCTCGGGCCC
CGCCTCCGACGCCGGCACAGCTCCCTCTCACGAGCTCTCTCATGCCACCT
CCCTGCACTCGTACGCGTCTATGGCCAGGCCTCCAAATGGCACAGCCGGG
CATGATGGAGGAGCTGGGGGTGGATCAAGCGTAGGCGGGCATTTCCGCCC
CTCGGCTGGAGACGATCGCAGATACGCAGCCTCTTGCGAAACGCCGTCAA
TCTCTCCTTGCGTGGGCGAGCCAGCCTCCTCAGGCATCAATGTGTCAGCA
ATTTTATCGCCAACACCGGTTTCGACCGGTACGAGTGATGACGACATCTC
GATGAACAAGCAAGCTGTAGCAAAAGCTGTAGAGGGGTCGGGAGCCTGCC
TCGTCCATTGCCCCGCACCTCCCCTTGCAGCGGTATCCTCTTCCATTGCC
ATGAACGCGCAGGCGAGCACTTTCGATGACATGCTCGCCCAGGCTCTGGA
GGAGTCATTGGAGCTGGGGCGGGAACAGGCGCGGAGAGAGGAAGAGCGAA
ATCGCGCAGAGGCCCAAGCAGGGGGCGCAGAGATGGCTAAGGTCGCTGTC
ATGGCGAGTGTGCACGAGGATGTGGGGCGGAGAATGACGGGGTCACCGGG
CCGCACGGGCGCTGTCAAGAGCAGGCAAGGGCTTGCTAAGACGACCACAG
GGCTGGCATGGACAGTGAAGAACGTGGAAGAGGTATTAGAGGTGCGACCC
GAGCAACGTGGCAATCTCCGCGTATTGGTAGGGACCGAGGGACAGTATTT
GCAGCATATCCGAGCCTCCTGGGGGTTAGACGTACGCATTTTGGACGATG
ACACCGAGATCAGGATTCGCTTTGCTGCTTCTAGTCAAGGCCGAGCACTG
TTTGGTGGCGAGGAGGGCAGTGAGGAGGAGCAGGAGAACCAGCTTGTGGG
TTTCAAAGCAGATCTTAGTCACATACTGAACGACCCGCAGCGCCTTATCG
AGGAGCGGCTCTCTCGCTATGTCCATGTTCTCATCGACTGGAGCAACATC
GTCTTCAGCGCAGGAAGCGGGAGCACGCCAGACTTGAGCCATGGGGTTGA
CGCGAAACGCTTCGCTGCGCTCTTAGAGCAAGATGAGAATGTGATGACTA
AATTCATGGCCACCTCCACTCACCCTCTCCTCGATCCAGGCACAGATATG
TTTCGACAGTTAGGATATGTCACACGCGTAGAGGCTCGTGGCAAGGAGGG
TTTTGTGGATGGATCACTTCAGCTGAAGCTAATGGAGGTGGCGACGAAGG
AGTTTCGTCATAAAGCACAGCACATGATTCGTTTGGCTACAGGCGACGGG
AACATGCACGATGAGCACGGACGGAAGGACCATGAGAGGGCGTGCTTTCC
TAAGATGGTCGAAGACGCTCTGCGAAATGGCTACAAGGTAGAATTATGGA
CATGGCGGCGATCGTGTTCCCACAAGTACTTCGAAATGCTGCAATACTAC
CATCCCCGTTTCATGATACAATTCTGTGACAATTTTCGGGATTTCATTTT
TCCCGGTGTCTCAACTCGCTAGGGCGTCCCAGATTCCGTGCCAGTCGTTT
CGTCCAATAGATAAATGAGTGACGTCGACGAGAGCGTTCGTGTCGGACCT
GACTGAGATTTTGTTATAATTGTGTGCAAACCCGCGTATCTTTGCAGCGG
TATCAACTGGAAGTCTCACTGCTTTCTAGAGAGTGTATTAAGAGCAACTT
GAATCAGTTGGAGATGAAAACACTGGAAATACAACAAGCGCATGGAAAGG
ACTAAAGTGAGGCTCATTTTAAGAAGCAAGATGGATTTCCGGATGCGCGC
CTGTTACGCGGCTCATTTGAATCTATCATGCTCTTCGTCGGTGCGTAGTC
CTATCCACACCTCGGGTGTGCGTGACCTTTACACGTGCCGTGTAAGCAGC
AGATGACAAGCTTTTCTGAAGAGGGGATAGCTTTTTTATAAAAAGGACGA
CAAATTTTTAGGCATCAAGCCGCGAAATATCACATTTGACATTGACAAGT
CACACAAAGCCATGGAGAGGCCTTTATCCGGGGAACTGTAGAAAGACACG
CAATGTACGATATGAACGAAAGGAATGCCCTGTTCCTGCTTTAACAGCTC
TTTGTCATTTATCGAAGCTCTACTGAGCAATTTTTTTCATTCGTCACTTT
GTGCACTAAATTTACAAGTAAAGAAGAGACACTACCAAAGATACTTTTCA
TTCCACAGCCGGTAATGAAATCGAGTCAAAATAAGCCGAAATTTCGGATA
GGGGCCGTGCAATCGTTGAGAGGAAGCAAGCGCGAAAAGCTTGACATTAA
CCAACCATTTGTTCATGATGCCAAGAAGAACCC back to topprotein sequence of rna6063 >rna6063-protein ID=rna6063-protein|Name=rna6063|organism=Nannochloropsis gaditana|type=polypeptide|length=922bp
MEASLMCRGQSSSTSPATAVLAQGMRSRIFTGPAWNISRPVWIGFLLLCA
LVVATMGQGGSHGLSHDSARDMNTPADVAPSPDSTLTVPSAPGSPITTGG
FSGPSGGFRILETLLGSKGSHVNKGEGAPSTSRADGSVESYQAGGRVVVD
SRTHPPESEISEQGQGAGLPPVIAANLREALPPAFIQEGPVQELPKEQKQ
GHAQPEQKVGLTNPSHPKAKGPQAEVNYAAEKAGAVVLQSSHSLVGAKNL
LDDDKDKYARSPCDQSKWLIINLSEDIRIDSLVLANYEKFSSMVKDFQVL
YSVKCPSLDGDEDSDGWMELGTFQAKEKAGEQRFQVDPPRYARYLKVRLL
SHWSREFYCTLSQIKVLGSTLQQGFMDDWQRQKINLGSHLEAIGPSDAIG
SHKEVEGGGDGGSVNQTCLFDGDCPAPEGEETPFMPADNVEGDLSTIDTS
TAEDDLGAHSITPPASKAPKPSKANPGNERVQEDLQQTHSTTVENGLQGT
GREGVVQHDDLDRNLNGTGSDDDLQRINSSLPFGRDEALKGGASGDECTG
EKMSEHSPAKEPTNEQLRKDLPSRNPRHEDGEILVESGGTAVARGKAIPS
SGNLHAENSEEQAVARPPSSADLPLPLDAPKVHDTTAKSSGQSLEALHPT
ASSAAESEGEDIAKAREPENGATAEAEFYEASASGGKPLVSPTRDSNGDG
VVTPIPHMGPGSHAKPPTQVHDGGSPQYTAASTTSTTTVLATVSGAPAKT
ELMTRFRHQCLQQMRLSDFKKQKLAKLQDDPRTKDHGTGSTATSLGNGSP
YDNIFKTLMDEMASLEINQSIFDVYVSNLHSCFVQVVDDVLLEQDRARLE
ALETIGLLQARLQSQAAVNEQFLRRMQRLESLSLAGGLAWIALIACLVLA
AGAQRALWKRWQGIATIEQPEM back to topmRNA from alignment at CM002467.1:473229..476683- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6063 ID=rna6063|Name=rna6063|organism=Nannochloropsis gaditana|type=mRNA|length=3455bp|location=Sequence derived from alignment at CM002467.1:473229..476683- (Nannochloropsis gaditana)
CGATACAACGTAACATTTCAGACTCTTTCGAACAGTGTGACAACTTGTGA
GGCCTCGAAAAATTAGACGAGTTGGGTTTACGAGCGAAGGATTTTTCTTG
CTGGTTGCGACAACCATTTACTTAGGCTAGAACGTTTGGCAAACCCTACC
ATCAACTACCACCATCTCCTACGATTGACACATGGTCACACAATTTAAAT
GCCGGCTCCATTCACACTCATGGCAAATAATATCACCACTTTGACAGCAC
AAAGTGAATCAGTAGTTATTGCACCCCGTATCCTGTTATTCGAAGGGTGG
TCAATCTTCTGGCCTTGGAAGTTTAAGTCAGCCACTCAAGCGTACTTCGC
ACACGGTACCTGGGCAGAGAATGGTCAAATTCCAAACTACCGTTCGTGTT
TGTCAAGAGCCTTGAGCAATATTTGTATTCAGTCCATTCAATCGTGATGG
AAGCGTCACTTATGTGTCGTGGACAGTCAAGCAGTACGTCGCCTGCCACG
GCTGTCCTTGCTCAAGGGATGAGAAGTAGAATTTTCACTGGGCCAGCGTG
GAACATAAGTCGGCCAGTTTGGATAGGTTTTCTCTTGCTTTGTGCGTTAG
TGGTCGCAACCATGGGCCAAGGTGGATCGCATGGGCTTTCTCATGACAGT
GCAAGGGACATGAATACCCCTGCCGATGTCGCGCCCTCTCCGGACTCTAC
CTTGACGGTCCCGAGCGCCCCAGGCAGTCCTATTACAACTGGAGGATTTA
GCGGCCCTAGTGGTGGCTTCAGAATCCTGGAGACCTTGCTCGGAAGTAAA
GGAAGTCATGTGAACAAGGGAGAGGGGGCACCCTCGACGAGCAGGGCGGA
TGGGTCCGTTGAAAGCTATCAAGCGGGCGGAAGGGTAGTGGTGGATTCCA
GGACGCATCCACCCGAATCTGAGATATCTGAACAGGGGCAAGGGGCTGGT
CTCCCGCCAGTTATTGCAGCAAACCTACGCGAGGCTCTTCCACCGGCATT
CATTCAGGAAGGCCCCGTCCAAGAGCTACCGAAGGAGCAGAAGCAGGGGC
ACGCGCAACCTGAGCAAAAGGTCGGCCTTACAAATCCTAGCCACCCGAAA
GCCAAGGGCCCTCAAGCCGAAGTGAACTATGCGGCGGAAAAGGCAGGAGC
AGTGGTGCTGCAATCGTCACATTCCCTCGTCGGTGCGAAGAATCTCTTGG
ATGATGATAAGGACAAGTACGCTCGGAGTCCTTGTGATCAGAGCAAATGG
CTCATTATCAATCTGTCTGAAGATATACGTATTGATTCCTTAGTTCTGGC
TAATTACGAGAAGTTTTCTTCAATGGTGAAGGACTTCCAGGTTTTGTACA
GTGTGAAGTGTCCCTCGTTGGACGGAGACGAGGATTCGGACGGCTGGATG
GAACTTGGTACTTTCCAAGCCAAAGAAAAAGCTGGGGAGCAGCGATTTCA
GGTTGATCCGCCGCGGTACGCTAGATATCTGAAAGTGCGCCTCCTGTCTC
ATTGGAGTCGCGAGTTTTATTGCACGCTCAGTCAGATAAAAGTTTTGGGC
TCAACCCTGCAGCAGGGCTTTATGGACGATTGGCAGCGGCAAAAAATCAA
TCTAGGCTCACATTTGGAGGCAATTGGCCCTTCCGATGCTATTGGAAGCC
ATAAAGAGGTTGAAGGTGGCGGTGACGGTGGATCAGTGAATCAAACTTGT
CTCTTCGACGGCGATTGCCCAGCCCCGGAGGGCGAGGAAACGCCTTTCAT
GCCCGCAGACAATGTGGAAGGGGACTTATCCACCATTGATACCAGTACCG
CCGAAGATGATCTTGGAGCGCACTCGATCACGCCGCCCGCCTCGAAGGCG
CCGAAGCCCTCCAAAGCCAACCCAGGAAATGAACGTGTACAGGAGGATCT
TCAACAGACACACAGCACAACCGTGGAAAATGGCTTGCAGGGAACTGGAC
GCGAAGGCGTAGTGCAGCATGATGATCTTGATCGGAATCTCAATGGCACG
GGTAGCGATGACGACCTTCAGAGAATAAATTCGAGTCTTCCTTTCGGGAG
GGATGAAGCGCTAAAGGGCGGTGCCTCAGGTGACGAGTGCACAGGCGAAA
AAATGTCAGAGCATTCTCCGGCAAAGGAGCCGACGAATGAACAACTAAGG
AAAGATCTGCCTTCTCGCAATCCAAGACATGAAGACGGTGAGATCCTAGT
GGAGAGTGGGGGCACAGCTGTAGCAAGGGGAAAAGCTATTCCATCTTCAG
GAAATCTACACGCGGAGAATAGTGAAGAGCAGGCAGTTGCAAGACCCCCG
TCCTCAGCAGACCTGCCTTTGCCTTTGGATGCCCCCAAGGTACACGATAC
TACAGCGAAATCCAGTGGGCAATCTCTAGAGGCTTTACACCCTACGGCAT
CCTCTGCTGCGGAGTCCGAAGGGGAAGATATTGCGAAAGCGCGAGAGCCG
GAAAATGGTGCGACGGCGGAAGCTGAGTTTTACGAGGCCTCTGCGTCCGG
CGGCAAGCCATTGGTCTCGCCTACTAGAGATAGCAATGGAGATGGTGTAG
TCACACCTATTCCACATATGGGCCCGGGAAGTCATGCAAAACCTCCAACT
CAGGTTCACGACGGTGGTTCACCGCAGTACACAGCCGCAAGCACGACGAG
CACAACAACTGTTTTAGCGACAGTGAGCGGAGCACCGGCCAAAACGGAGC
TGATGACTCGATTTCGACATCAATGTTTGCAGCAAATGCGACTGAGCGAT
TTTAAAAAGCAGAAGCTGGCCAAACTTCAGGATGACCCGCGAACGAAAGA
TCACGGGACTGGGTCTACTGCTACCTCTCTGGGAAATGGAAGTCCATACG
ACAATATATTTAAGACTTTGATGGACGAAATGGCATCTTTAGAAATTAAT
CAGTCTATTTTTGACGTGTACGTGAGTAATTTGCACAGCTGCTTTGTTCA
AGTCGTGGATGACGTGCTTTTAGAACAAGACAGGGCGCGTCTGGAAGCCC
TTGAAACCATTGGCCTACTGCAAGCGCGTCTTCAGAGCCAAGCAGCGGTC
AACGAACAGTTTTTGCGCCGTATGCAGCGTTTGGAAAGCCTGTCGTTGGC
TGGTGGGTTGGCGTGGATTGCGCTTATCGCTTGCCTCGTTTTGGCAGCCG
GCGCGCAGAGGGCACTGTGGAAACGATGGCAAGGTATAGCGACGATAGAG
CAACCGGAAATGTAAGCAGCGTGGGTGAGTGGGTTCTTCTTGGCATCATG
AACAAATGGTTGGTTAATGTCAAGCTTTTCGCGCTTGCTTCCTCTCAACG
ATTGCACGGCCCCTATCCGAAATTTCGGCTTATTTTGACTCGATTTCATT
ACCGGCTGTGGAATGAAAAGTATCTTTGGTAGTGTCTCTTCTTTACTTGT
AAATTTAGTGCACAAAGTGACGAATGAAAAAAATTGCTCAGTAGAGCTTC
GATAA back to topCoding sequence (CDS) from alignment at CM002467.1:473229..476683- >rna6063 ID=rna6063|Name=rna6063|organism=Nannochloropsis gaditana|type=CDS|length=2769bp|location=Sequence derived from alignment at CM002467.1:473229..476683- (Nannochloropsis gaditana)
ATGGAAGCGTCACTTATGTGTCGTGGACAGTCAAGCAGTACGTCGCCTGC
CACGGCTGTCCTTGCTCAAGGGATGAGAAGTAGAATTTTCACTGGGCCAG
CGTGGAACATAAGTCGGCCAGTTTGGATAGGTTTTCTCTTGCTTTGTGCG
TTAGTGGTCGCAACCATGGGCCAAGGTGGATCGCATGGGCTTTCTCATGA
CAGTGCAAGGGACATGAATACCCCTGCCGATGTCGCGCCCTCTCCGGACT
CTACCTTGACGGTCCCGAGCGCCCCAGGCAGTCCTATTACAACTGGAGGA
TTTAGCGGCCCTAGTGGTGGCTTCAGAATCCTGGAGACCTTGCTCGGAAG
TAAAGGAAGTCATGTGAACAAGGGAGAGGGGGCACCCTCGACGAGCAGGG
CGGATGGGTCCGTTGAAAGCTATCAAGCGGGCGGAAGGGTAGTGGTGGAT
TCCAGGACGCATCCACCCGAATCTGAGATATCTGAACAGGGGCAAGGGGC
TGGTCTCCCGCCAGTTATTGCAGCAAACCTACGCGAGGCTCTTCCACCGG
CATTCATTCAGGAAGGCCCCGTCCAAGAGCTACCGAAGGAGCAGAAGCAG
GGGCACGCGCAACCTGAGCAAAAGGTCGGCCTTACAAATCCTAGCCACCC
GAAAGCCAAGGGCCCTCAAGCCGAAGTGAACTATGCGGCGGAAAAGGCAG
GAGCAGTGGTGCTGCAATCGTCACATTCCCTCGTCGGTGCGAAGAATCTC
TTGGATGATGATAAGGACAAGTACGCTCGGAGTCCTTGTGATCAGAGCAA
ATGGCTCATTATCAATCTGTCTGAAGATATACGTATTGATTCCTTAGTTC
TGGCTAATTACGAGAAGTTTTCTTCAATGGTGAAGGACTTCCAGGTTTTG
TACAGTGTGAAGTGTCCCTCGTTGGACGGAGACGAGGATTCGGACGGCTG
GATGGAACTTGGTACTTTCCAAGCCAAAGAAAAAGCTGGGGAGCAGCGAT
TTCAGGTTGATCCGCCGCGGTACGCTAGATATCTGAAAGTGCGCCTCCTG
TCTCATTGGAGTCGCGAGTTTTATTGCACGCTCAGTCAGATAAAAGTTTT
GGGCTCAACCCTGCAGCAGGGCTTTATGGACGATTGGCAGCGGCAAAAAA
TCAATCTAGGCTCACATTTGGAGGCAATTGGCCCTTCCGATGCTATTGGA
AGCCATAAAGAGGTTGAAGGTGGCGGTGACGGTGGATCAGTGAATCAAAC
TTGTCTCTTCGACGGCGATTGCCCAGCCCCGGAGGGCGAGGAAACGCCTT
TCATGCCCGCAGACAATGTGGAAGGGGACTTATCCACCATTGATACCAGT
ACCGCCGAAGATGATCTTGGAGCGCACTCGATCACGCCGCCCGCCTCGAA
GGCGCCGAAGCCCTCCAAAGCCAACCCAGGAAATGAACGTGTACAGGAGG
ATCTTCAACAGACACACAGCACAACCGTGGAAAATGGCTTGCAGGGAACT
GGACGCGAAGGCGTAGTGCAGCATGATGATCTTGATCGGAATCTCAATGG
CACGGGTAGCGATGACGACCTTCAGAGAATAAATTCGAGTCTTCCTTTCG
GGAGGGATGAAGCGCTAAAGGGCGGTGCCTCAGGTGACGAGTGCACAGGC
GAAAAAATGTCAGAGCATTCTCCGGCAAAGGAGCCGACGAATGAACAACT
AAGGAAAGATCTGCCTTCTCGCAATCCAAGACATGAAGACGGTGAGATCC
TAGTGGAGAGTGGGGGCACAGCTGTAGCAAGGGGAAAAGCTATTCCATCT
TCAGGAAATCTACACGCGGAGAATAGTGAAGAGCAGGCAGTTGCAAGACC
CCCGTCCTCAGCAGACCTGCCTTTGCCTTTGGATGCCCCCAAGGTACACG
ATACTACAGCGAAATCCAGTGGGCAATCTCTAGAGGCTTTACACCCTACG
GCATCCTCTGCTGCGGAGTCCGAAGGGGAAGATATTGCGAAAGCGCGAGA
GCCGGAAAATGGTGCGACGGCGGAAGCTGAGTTTTACGAGGCCTCTGCGT
CCGGCGGCAAGCCATTGGTCTCGCCTACTAGAGATAGCAATGGAGATGGT
GTAGTCACACCTATTCCACATATGGGCCCGGGAAGTCATGCAAAACCTCC
AACTCAGGTTCACGACGGTGGTTCACCGCAGTACACAGCCGCAAGCACGA
CGAGCACAACAACTGTTTTAGCGACAGTGAGCGGAGCACCGGCCAAAACG
GAGCTGATGACTCGATTTCGACATCAATGTTTGCAGCAAATGCGACTGAG
CGATTTTAAAAAGCAGAAGCTGGCCAAACTTCAGGATGACCCGCGAACGA
AAGATCACGGGACTGGGTCTACTGCTACCTCTCTGGGAAATGGAAGTCCA
TACGACAATATATTTAAGACTTTGATGGACGAAATGGCATCTTTAGAAAT
TAATCAGTCTATTTTTGACGTGTACGTGAGTAATTTGCACAGCTGCTTTG
TTCAAGTCGTGGATGACGTGCTTTTAGAACAAGACAGGGCGCGTCTGGAA
GCCCTTGAAACCATTGGCCTACTGCAAGCGCGTCTTCAGAGCCAAGCAGC
GGTCAACGAACAGTTTTTGCGCCGTATGCAGCGTTTGGAAAGCCTGTCGT
TGGCTGGTGGGTTGGCGTGGATTGCGCTTATCGCTTGCCTCGTTTTGGCA
GCCGGCGCGCAGAGGGCACTGTGGAAACGATGGCAAGGTATAGCGACGAT
AGAGCAACCGGAAATGTAA back to top
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