EWM24659.1, cds6035 (CDS) Nannochloropsis gaditana

Overview
NameEWM24659.1
Unique Namecds6035
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:445550..447739 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24659.1
Productgtp-binding protein parf
Orig transcript idgnl|cribi|Naga_100055g4.7343.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:445550..447739 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Homology
BLAST of EWM24659.1 vs. NCBI_GenBank
Match: gi|585106181|gb|EWM24659.1| (gtp-binding protein parf [Nannochloropsis gaditana])

HSP 1 Score: 1484.93 bits (3843), Expect = 0.000e+0
Identity = 729/729 (100.00%), Postives = 729/729 (100.00%), Query Frame = 0
Query:    1 MGNDVSSSITSIRSEEDRRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKEEDHAPVIEKSNKEARKPQSVRVLPDTVVPGTSRENTGVTRSKGEGHKPVGHVSSPAAAVASKHPRPIQGDPQAWPGVTCRSTQGPQRSSVQESGLVDVEDFKFQPREGNEQNELTLFLAEAEGGSTEDDMNEERRRQSLRSCLKPGSLASLSEAQRRATGVVGSGDVREGDEGEEDEDLPAEEGEQRYVGLRPVNLPAKDISLSERGCNADRGKGSLSDDQKKGLVGPLSVHEDGLGVWMTAQGKESDGKDDIDIPAGLPLPLHSLDLSQADSSEGEDCDQGIFNRKIQQPGDSSLQRTGNNMEGSLSSFSNSSTTAAPLPLEGLADKTDFVLSKAARAAIAATMEELNGRSPGEDLANGDLSRREQRSAGKMKTKASEGKRKRRNSSGNGGQSV 729
            MGNDVSSSITSIRSEEDRRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKEEDHAPVIEKSNKEARKPQSVRVLPDTVVPGTSRENTGVTRSKGEGHKPVGHVSSPAAAVASKHPRPIQGDPQAWPGVTCRSTQGPQRSSVQESGLVDVEDFKFQPREGNEQNELTLFLAEAEGGSTEDDMNEERRRQSLRSCLKPGSLASLSEAQRRATGVVGSGDVREGDEGEEDEDLPAEEGEQRYVGLRPVNLPAKDISLSERGCNADRGKGSLSDDQKKGLVGPLSVHEDGLGVWMTAQGKESDGKDDIDIPAGLPLPLHSLDLSQADSSEGEDCDQGIFNRKIQQPGDSSLQRTGNNMEGSLSSFSNSSTTAAPLPLEGLADKTDFVLSKAARAAIAATMEELNGRSPGEDLANGDLSRREQRSAGKMKTKASEGKRKRRNSSGNGGQSV
Sbjct:    1 MGNDVSSSITSIRSEEDRRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKEEDHAPVIEKSNKEARKPQSVRVLPDTVVPGTSRENTGVTRSKGEGHKPVGHVSSPAAAVASKHPRPIQGDPQAWPGVTCRSTQGPQRSSVQESGLVDVEDFKFQPREGNEQNELTLFLAEAEGGSTEDDMNEERRRQSLRSCLKPGSLASLSEAQRRATGVVGSGDVREGDEGEEDEDLPAEEGEQRYVGLRPVNLPAKDISLSERGCNADRGKGSLSDDQKKGLVGPLSVHEDGLGVWMTAQGKESDGKDDIDIPAGLPLPLHSLDLSQADSSEGEDCDQGIFNRKIQQPGDSSLQRTGNNMEGSLSSFSNSSTTAAPLPLEGLADKTDFVLSKAARAAIAATMEELNGRSPGEDLANGDLSRREQRSAGKMKTKASEGKRKRRNSSGNGGQSV 729          
BLAST of EWM24659.1 vs. NCBI_GenBank
Match: gi|553189047|ref|XP_005854920.1| (ras superfamily gtpase, partial [Nannochloropsis gaditana CCMP526] >gi|553195368|ref|XP_005856132.1| ras superfamily gtpase, partial [Nannochloropsis gaditana CCMP526] >gi|422292921|gb|EKU20222.1| ras superfamily gtpase, partial [Nannochloropsis gaditana CCMP526] >gi|422294135|gb|EKU21435.1| ras superfamily gtpase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1012.68 bits (2617), Expect = 0.000e+0
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0
Query:  232 SVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKEEDHAPVIEKSNKEARKPQSVRVLPDTVVPGTSRENTGVTRSKGEGHKPVGHVSSPAAAVASKHPRPIQGDPQAWPGVTCRSTQGPQRSSVQESGLVDVEDFKFQPREGNEQNELTLFLAEAEGGSTEDDMNEERRRQSLRSCLKPGSLASLSEAQRRATGVVGSGDVREGDEGEEDEDLPAEEGEQRYVGLRPVNLPAKDISLSERGCNADRGKGSLSDDQKKGLVGPLSVHEDGLGVWMTAQGKESDGKDDIDIPAGLPLPLHSLDLSQADSSEGEDCDQGIFNRKIQQPGDSSLQRTGNNMEGSLSSFSNSSTTAAPLPLEGLADKTDFVLSKAARAAIAATMEELNGRSPGEDLANGDLSRREQRSAGKMKTKASEGKRKRRNSSGNGGQSV 729
            SVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKEEDHAPVIEKSNKEARKPQSVRVLPDTVVPGTSRENTGVTRSKGEGHKPVGHVSSPAAAVASKHPRPIQGDPQAWPGVTCRSTQGPQRSSVQESGLVDVEDFKFQPREGNEQNELTLFLAEAEGGSTEDDMNEERRRQSLRSCLKPGSLASLSEAQRRATGVVGSGDVREGDEGEEDEDLPAEEGEQRYVGLRPVNLPAKDISLSERGCNADRGKGSLSDDQKKGLVGPLSVHEDGLGVWMTAQGKESDGKDDIDIPAGLPLPLHSLDLSQADSSEGEDCDQGIFNRKIQQPGDSSLQRTGNNMEGSLSSFSNSSTTAAPLPLEGLADKTDFVLSKAARAAIAATMEELNGRSPGEDLANGDLSRREQRSAGKMKTKASEGKRKRRNSSGNGGQSV
Sbjct:    1 SVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKEEDHAPVIEKSNKEARKPQSVRVLPDTVVPGTSRENTGVTRSKGEGHKPVGHVSSPAAAVASKHPRPIQGDPQAWPGVTCRSTQGPQRSSVQESGLVDVEDFKFQPREGNEQNELTLFLAEAEGGSTEDDMNEERRRQSLRSCLKPGSLASLSEAQRRATGVVGSGDVREGDEGEEDEDLPAEEGEQRYVGLRPVNLPAKDISLSERGCNADRGKGSLSDDQKKGLVGPLSVHEDGLGVWMTAQGKESDGKDDIDIPAGLPLPLHSLDLSQADSSEGEDCDQGIFNRKIQQPGDSSLQRTGNNMEGSLSSFSNSSTTAAPLPLEGLADKTDFVLSKAARAAIAATMEELNGRSPGEDLANGDLSRREQRSAGKMKTKASEGKRKRRNSSGNGGQSV 498          
BLAST of EWM24659.1 vs. NCBI_GenBank
Match: gi|553189062|ref|XP_005854925.1| (gtp-binding parf-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|553195396|ref|XP_005856138.1| gtp-binding parf-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292927|gb|EKU20228.1| gtp-binding parf-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294140|gb|EKU21440.1| gtp-binding parf-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 452.981 bits (1164), Expect = 2.331e-153
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
Query:   18 RRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPV 238
            RRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPV
Sbjct:    1 RRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPV 221          
BLAST of EWM24659.1 vs. NCBI_GenBank
Match: gi|1173932084|gb|OQR84199.1| (GTP-binding protein Parf [Achlya hypogyna])

HSP 1 Score: 175.637 bits (444), Expect = 4.294e-42
Identity = 108/331 (32.63%), Postives = 173/331 (52.27%), Query Frame = 0
Query:    1 MGNDVS-SSITSIRSEEDRRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAAL 330
            MGN+ S  +  +++++ D R  IRRMD  ++KK+  G+ +N+K++IRGERG+GKS+L++RL+GQP   + +EPT EI+TA+I W+      +VK E+WDVVD                                G+P D P+ A       + G H   ++DA  VDV++ +H  IF+M+    + L+YV+ QL  VP  IP L+L  FRDL  DD    R +    K + +++     +  ++    R L++            H F  S+ NC+GL  L+ YL +PFL +K   +++QL      L++   +V+  I    + D+VA L
Sbjct:    1 MGNEGSRPADPAVQAQADAR-TIRRMDKVIRKKVRGGLTYNMKLLIRGERGTGKSSLMARLQGQPIPQT-HEPTREIQTASIQWTMATHEDMVKCELWDVVD-------------------------------VGIPPDEPLEAPT---PDSVGRHPVALVDAQNVDVYQNAHCVIFLMDITKYSTLEYVRAQLDHVPVHIPTLVLGTFRDLRKDDVPLKRAI---FKEDVQTLLYGDHKDHKLPGFRRPLEQ------------HYFEASLSNCYGLKALHTYLGVPFLHLKVATVKQQLRLLETELASTKAQVDVSIASQKYSDFVANL 280          
BLAST of EWM24659.1 vs. NCBI_GenBank
Match: gi|695430225|ref|XP_009530388.1| (hypothetical protein PHYSODRAFT_391303, partial [Phytophthora sojae] >gi|348673140|gb|EGZ12959.1| hypothetical protein PHYSODRAFT_391303, partial [Phytophthora sojae])

HSP 1 Score: 162.155 bits (409), Expect = 1.200e-39
Identity = 106/346 (30.64%), Postives = 178/346 (51.45%), Query Frame = 0
Query:    6 SSSITSIRS---EEDRRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKED-GAVVKVEIWDVVDKGL--------GRRGSLIGNNVRGTGTVAHDG---GGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKEED 336
            S+S+T + S      + + I+RMD A+++++  G+ +N+K++IRG +G+GK++L  RLKG+P   + ++ TP++++ATINWS +++    VK E+WDVVD+G            GS    N     +  H G   GG       L  +    A     A  +G+H+  ++DA+ VDV+  +HG IF+++      L+YV++QL  VP  IP L+L NFR    D   + +  +ED +   E +  +  RP+  H   R   E+             F CS+ NC+GL  L+ Y  IPFL +K   + +Q+         +  +V+  I    + +YV  ++A   D
Sbjct:   64 SASLTGVSSPALNPKKERTIQRMDKAIRRRVRGGITYNMKLLIRGAKGTGKTSLFQRLKGEPIPET-HQSTPQLQSATINWSFRQNLEENVKCEVWDVVDRGFVSVDPEGDAEDGSSAQQNAARGASAEHGGLQSGGS------LSAEAAAAAAAAAAAMQNGTHSVAIVDASTVDVYHEAHGVIFLLDVTKWDTLEYVKQQLDSVPVHIPTLVLGNFR----DQGAQRKIFKEDIE---ELLYGSSDRPQ--HQQWRRPTELL-----------YFECSLLNCYGLKSLHQYFGIPFLQLKLATIRQQMRIVEGEFVHLKHDVQATISEQRYAEYVEHIKATGSD 382          
BLAST of EWM24659.1 vs. NCBI_GenBank
Match: gi|301102231|ref|XP_002900203.1| (GTP-binding protein Parf [Phytophthora infestans T30-4] >gi|262102355|gb|EEY60407.1| GTP-binding protein Parf [Phytophthora infestans T30-4])

HSP 1 Score: 157.147 bits (396), Expect = 1.029e-37
Identity = 100/332 (30.12%), Postives = 174/332 (52.41%), Query Frame = 0
Query:   14 SEEDRRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKED-GAVVKVEIWDVVDKGL--------GRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKEED 336
            S   + + I+RMD A+++++  G+ +N+K+++RG +G+GK++L  RLKG+P   + ++ TP++++ATI WS +++    VK E+WDVVDKG            GS    N   TG V+++ GG       L  +    A     A  +G+H+  ++DA+ VDV+  +H  IF+++      L+YV++QL  VP  IP L+L NFR    D   + +  +ED +   E +  +  RP+             ++Q  +      F CS+ NC+GL  L+ Y  IPFL +K   + +Q+       + +  +V+  I    + +YV  ++A   D
Sbjct:   75 SNPKKERTIQRMDKAIRRRVRGGITYNMKLLVRGAKGTGKTSLFQRLKGEPIPET-HQSTPQLQSATIKWSFRQNLEENVKCEVWDVVDKGFVSVETEEGAEEGSTRPQNA-STG-VSNEHGGLQSG-GSLSAEASAAAAAAAAAMQNGTHSVAIVDASTVDVYHEAHSVIFLLDITKWDTLEYVKQQLDSVPVHIPTLVLGNFR----DQGAQRKIFKEDIQ---ELLYGSRDRPQ-------------SQQWRRPSELLYFECSLLNCYGLKSLHQYFGIPFLQLKLATIRQQMRIVEGEFAHLKHDVQATISDQRYSEYVEHIKATGSD 382          
BLAST of EWM24659.1 vs. NCBI_GenBank
Match: gi|698807890|ref|XP_009836974.1| (hypothetical protein H257_11675 [Aphanomyces astaci] >gi|574108039|gb|ETV73548.1| hypothetical protein H257_11675 [Aphanomyces astaci])

HSP 1 Score: 162.155 bits (409), Expect = 1.433e-37
Identity = 101/315 (32.06%), Postives = 162/315 (51.43%), Query Frame = 0
Query:   21 AIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAK-EDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRK--LEEDTKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALRA 332
            +IRRMD  ++KK+   + +N+K++IRGERG+GK++L++RL+G P   + + PT EIETA+INWS K      VK E+WDVVD GL  +      +                      LD          + + G H    +DA  VDV++ +HG IF+M+  +  +L+YV+ QL  VP  IP L++  FRDL   D +  ++   +ED       V+A       ++   +D++  +  +  +    H F  S+ NC+GL  L+ YL+IPFL +K   +++QL      L+   L V+  I    +  +V  + A
Sbjct:   32 SIRRMDKVIRKKVRGEITYNMKLLIRGERGTGKTSLVARLQGLPIPET-HVPTREIETASINWSMKGSSEESVKCEVWDVVDVGLTSKDDSDAADAAM-------------------LD----------SESQGRHQVAPVDAQNVDVYQNAHGVIFLMDISNYASLEYVKHQLDMVPIHIPTLIIGTFRDLRRADGEPLKRAIFKED-------VQAL------LYGTAKDMKNPAFRRPVEQ---HYFEASLSNCYGLKALHTYLSIPFLHLKVATVKQQLKLLETDLATAKLNVDTTISTQKYSHFVHTIAA 300          
BLAST of EWM24659.1 vs. NCBI_GenBank
Match: gi|1084305289|ref|XP_018655426.1| (hypothetical protein Smp_062680 [Schistosoma mansoni] >gi|360045298|emb|CCD82846.1| hypothetical protein Smp_062680 [Schistosoma mansoni])

HSP 1 Score: 157.918 bits (398), Expect = 2.109e-37
Identity = 96/285 (33.68%), Postives = 149/285 (52.28%), Query Frame = 0
Query:   29 LQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVVDKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRDLLLDDTQEGRKLEED-------------TKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQL 300
            LQ+K   GV +N+KI+IRG+R  GKS LLSRLKG+ F    Y P+ EI+ A I+W+ +   +V+KVE+WDVVDKG  R  S +   VR    +     G P                 + AG +G+     LDA+ ++V+KG+HG I MM+    +  +YV ++L ++P  +P+L+++NF D+     QE RK+ E+              ++   + E      R +H     +Q+ S+    +         SM+   GL  +Y +LNIPFL ++ DVL+ QL
Sbjct:   30 LQEKFSHGVDYNMKIVIRGDRNVGKSTLLSRLKGEQFKEE-YIPSNEIQLANIHWNHQNSQSVIKVEVWDVVDKGKPR--SSVSKGVRFFNKLT---KGQPSI---------------NIAGQAGNIE-PCLDASFINVYKGAHGVILMMDMTKPSTFEYVCRELIQIPPKLPILIMSNFHDI-----QEQRKVTEEQVQIFLNDSIMQLNQYNVTTDEKVNELSRNIH-----VQKTSSSNPIRSIPVQYCESSMKTGLGLMYVYKFLNIPFLCLQRDVLQYQL 282          
BLAST of EWM24659.1 vs. NCBI_GenBank
Match: gi|570996001|gb|ETP52715.1| (hypothetical protein F442_02318 [Phytophthora parasitica P10297])

HSP 1 Score: 160.999 bits (406), Expect = 3.408e-37
Identity = 99/328 (30.18%), Postives = 164/328 (50.00%), Query Frame = 0
Query:   18 RRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKED-GAVVKVEIWDVVDKGL-------GRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRD------LLLDDTQEGRKLEEDTKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALR 331
            + + I+RMD A+++++  G+ +N+K+++RG +G+GK++L  RLKG+P   + ++ TP++++ATINWS +++    VK E+WDVVDKG        G            T   A  GG    +   L  +    A     A  +G+H+  ++DA+ VDV+  +HG IF+++      L+YV++QL  VP  IP L+L NFRD      +  +D QE           G S    P + RR    L                   F CS+ NC+GL  L+ Y  IPFL +K   + +Q+       + +  +V+  I    + +YV  ++
Sbjct:   79 KERTIQRMDKAIRRRVRGGITYNMKLLVRGAKGTGKTSLFQRLKGEPIPET-HQSTPQLQSATINWSFRQNLEENVKCEVWDVVDKGFVPVETEEGAEDDSTRPQHANTAVSAEHGGLQ--SGGSLSAEASAAAAAAAAAMQNGTHSVAIVDASTVDVYHEAHGVIFLLDITKWDTLEYVKQQLDNVPVHIPTLVLGNFRDQGAQRKIFKEDIQELLY--------GSSDRPQPQQWRRPMELLY------------------FECSLLNCYGLKSLHQYFGIPFLQLKLATIRQQMRIVEGEFAHLKHDVQATISEQRYSEYVEHIK 377          
BLAST of EWM24659.1 vs. NCBI_GenBank
Match: gi|675181393|ref|XP_008899581.1| (hypothetical protein PPTG_07177 [Phytophthora parasitica INRA-310] >gi|568057788|gb|ETM54441.1| hypothetical protein L914_02228 [Phytophthora parasitica] >gi|568100237|gb|ETN14936.1| hypothetical protein PPTG_07177 [Phytophthora parasitica INRA-310] >gi|570335733|gb|ETO83681.1| hypothetical protein F444_02344 [Phytophthora parasitica P1976] >gi|970656283|gb|KUF94316.1| hypothetical protein AM588_10004607 [Phytophthora nicotianae])

HSP 1 Score: 160.999 bits (406), Expect = 3.532e-37
Identity = 99/328 (30.18%), Postives = 164/328 (50.00%), Query Frame = 0
Query:   18 RRQAIRRMDGALQKKLGKGVAHNLKIIIRGERGSGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKED-GAVVKVEIWDVVDKGL-------GRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAGASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGIPVLLLANFRD------LLLDDTQEGRKLEEDTKHEGESVEAAPVRPRRVHFNLRDLQEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQLSETRRVLSAMTLEVEEGIDRGSWGDYVAALR 331
            + + I+RMD A+++++  G+ +N+K+++RG +G+GK++L  RLKG+P   + ++ TP++++ATINWS +++    VK E+WDVVDKG        G            T   A  GG    +   L  +    A     A  +G+H+  ++DA+ VDV+  +HG IF+++      L+YV++QL  VP  IP L+L NFRD      +  +D QE           G S    P + RR    L                   F CS+ NC+GL  L+ Y  IPFL +K   + +Q+       + +  +V+  I    + +YV  ++
Sbjct:   79 KERTIQRMDKAIRRRVRGGITYNMKLLVRGAKGTGKTSLFQRLKGEPIPET-HQSTPQLQSATINWSFRQNLEENVKCEVWDVVDKGFVPVETEEGAEDDSTRPQHANTAVSAEHGGLQ--SGGSLSAEASAAAAAAAAAMQNGTHSVAIVDASTVDVYHEAHGVIFLLDITKWDTLEYVKQQLDNVPVHIPTLVLGNFRDQGAQRKIFKEDIQELLY--------GSSDRPQPQQWRRPMELLY------------------FECSLLNCYGLKSLHQYFGIPFLQLKLATIRQQMRIVEGEFAHLKHDVQATISEQRYSEYVEHIK 377          
The following BLAST results are available for this feature:
BLAST of EWM24659.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106181|gb|EWM24659.1|0.000e+0100.00gtp-binding protein parf [Nannochloropsis gaditana... [more]
gi|553189047|ref|XP_005854920.1|0.000e+0100.00ras superfamily gtpase, partial [Nannochloropsis g... [more]
gi|553189062|ref|XP_005854925.1|2.331e-153100.00gtp-binding parf-like protein, partial [Nannochlor... [more]
gi|1173932084|gb|OQR84199.1|4.294e-4232.63GTP-binding protein Parf [Achlya hypogyna][more]
gi|695430225|ref|XP_009530388.1|1.200e-3930.64hypothetical protein PHYSODRAFT_391303, partial [P... [more]
gi|301102231|ref|XP_002900203.1|1.029e-3730.12GTP-binding protein Parf [Phytophthora infestans T... [more]
gi|698807890|ref|XP_009836974.1|1.433e-3732.06hypothetical protein H257_11675 [Aphanomyces astac... [more]
gi|1084305289|ref|XP_018655426.1|2.109e-3733.68hypothetical protein Smp_062680 [Schistosoma manso... [more]
gi|570996001|gb|ETP52715.1|3.408e-3730.18hypothetical protein F442_02318 [Phytophthora para... [more]
gi|675181393|ref|XP_008899581.1|3.532e-3730.18hypothetical protein PPTG_07177 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6050rna6050Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications