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Properties
| Property Name | Value |
|---|
| Product | gtp-binding protein parf |
| Orig transcript id | gnl|cribi|Naga_100055g4.7343.mrna |
| Orig protein id | gnl|cribi|Naga_100055g4.7343 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:445525..447761 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6050 ID=rna6050|Name=rna6050|organism=Nannochloropsis gaditana|type=mRNA|length=4109bp
TCACAGAGCAACCACTTTGTTAATCCCTCGGTCTCGTACCATGCCTCTGC
TCCGCTTTGGGGGGCTATTCACGCTTACTTTATTGTGTGTTTTATCGATG
GGCGAGAGCTGCACGTGCTTCATTGTCACACCGGGAGCTTCTCAAGTTGG
GGCGATGCAAGTCACGTACGCAGCTGATTCGCACACACTCTACGGATATT
TACAGTTCTGGCCCCGAAGCCGTCATTCAGATGGAGAGGTAATAAATGTG
ACAGATTGGGACTCGGGGCTGTTCCGGGGCGTCATCAGGCAGGTGCCTTT
GACATACAACGTTGTGGGAAACGTAAACGAATTCGGATTGTGTATCACGG
AATCAACATGGGGCGGACTGGCTGAACTCGCACATCAACCCGGAGCCATT
CTGGATTACGGCTCGCTTATATACATTACTCTTCAGCGAGCAGCCTCCGC
ACAGGAAGCATTGCAAGTGATGACTGACCTTGTGGCCGAGTACGGTTACG
CATCAGAGGGGGAGACGTTCACTGTTGCGGATCCGGAAGAAGTTTGGGTT
TTGGAAATGATTGGGAAGGGGGAGCACGGTAAGGGAGCTGTGTGGGCGGC
CAAGCGAATTCCCGATGGCTACATTTCCGCGCACGCAAATCAAGCGCGAA
TTCAAACACTGGAAAGTGAAGGCATCGACCAGGTTTTATTCTCTGACGAC
GTAATTGACTTCGCCCGCCGAATAGGACGCTTTCCCACGGAGGCGCAGGA
TGATTTATTTTCTTTTAGTGATGTATACAATCCCATCACCTACCTGGCCG
CACGCGCCTGTGAGGGCCGCGTGTGGGATTTTTTCCGCCGCGCCACAGCT
GCAGACCAGTCGATCATGGGCCCATACCTCGATTATGTAACAGGGCGAAA
CTTGACGAAACGAATGCCGCTTTATATCAAACCTGTGGCGCCTTTGAGTA
CTTCGGACATTGTTGATGCCATGCGCAGTCATTATGAAAATACTCCTCTG
GCTTTCGACCAGGACGTAGGAGCTGAAGCTTTCGGTCTCCCTTACCGCTG
GCGGCCTTTGACGTGGCAACTTGACGATGGGCGCACGTTTTTCAATGAGC
GCGCCGCGGCGACACAACAGACGGGGTTTAGTCTCTTGGCACAGCTCCGA
AGAGGAGTCCCTGATCCCATCAAGGCGCTTCAATTTTTCGCAGTCGATGA
TACTGATTCATCAGTCATGATTCCTGTGTATGGCGGCATGGCGCTTGTCC
CTCCCAGCTACGGCCCAGGCAGCATATCTGTTTTTGAGCCTGAAAAGGCA
TTTTGGGCGTTTAACATGGTGGCAAATTTCGCATATGCTCGTTATGCCAT
AATTAATCCGGATGTCAGAAGGCGGCAAGGCGCCTTGGAAGCGCAGCAAT
GGAAGCTGGCAGTTGAGATAGATGAGGAATTTACTCGATTATGGGGAGAG
GACCAAATCAAGGCGGTCGCGATGATGACCACGGCCTGCGTCTCGAACGC
TGAGAGCCTTGTCCTTGAATGGAGAAGGTTTTACGGAGAACTCTTCGTCA
AATTCATGGATGGAAACATCAAGACAAAGGATAATCCAGAACAGCTTTTG
CCAGATGTCGAGCAGCCTGGGTACCGCCTGGAATGGCGTGAGCGTATCGT
CCGGGAGACGGGTGAGAGATACAGATTCCCTGCCGACATGTTTACGTCAC
AGCAATAGATGAGCTAGCGATAGGGCGTCAGTGAGGCGTGGACAGACGAA
TTCTATGGCCGCGAAGCTAATGTGACTGAGGTATGCATTCACACGCCAGG
ACCCTGAAATATACATGCAACACCAAGTCATGGTGTGTACGACCATCGTT
CCTCACGGTAGCTTAAAGCCCACCGCTCTGGCCCACCAGGGCCATTGCTT
GCTTCCATCTATAGCGATAAATCGCCTGGCTTACACGGGAAGCGGTAACA
TATCTGAACTCGCATAATTCAACAACTCCACTTCTCGGATGATATCATGC
TGTAACAGCCACACAATCTGCGCAAGCTTTTCTTGTCTCGCATCCTTTAT
GATATAATGTATATGTGGACACGAGATTTATGGACGGGCATGGCTTGTCA
TTAGTCTCATTTGCCGTACAGGTGTCAACGATCCCGTGGTGGATCCCAAA
GTCATGTTCTTGGCTCTTACCCGCTCTAAGTCCTTCAAAAGAGTTTCCAG
GCTTTTCCCGCCTCCAAAAGACGAGATCACGCGGAAAAATGAGCATAGGG
GAAAGCGTTGCTCAAATGCCATACATTGTATAGATTGCGTTTGTGTAGAA
GCCATGGGATGGAGCTAAAATGTGATGAAGAAATAAGAATCTGGAAATGA
GGATGCGCATCATAACTCAGACAACGGTAACCCACTAAACGGCGTTTGAG
ACATACCGCGTACACGCTTTCCAAAGTAATAGTGCGCATAGCCCGAGCCA
GTCCCCAGAATTGCAGATGGGCGGCGAGAGTGTACATGTGCGGAAGGTCA
ACGTGGATCGCAGCGGACGTCTCCTCCAGTGTTTTTAATGGGCTCGCGGC
TCTCACCAAGTCGCGAAGCTTCTGTGATCCCCGCTCAGGCAGCTTTGTCA
AAATATCCTCTTCATCCATGAGCAGCAACAATGTCTGTGAGGGTTGAAAA
GGGCCTATGCCGGAGGTATGACTCGTTGAATTCCCGACCTCCACCTGATC
GTCGTGCCGTGGAAACGACCCCGGAATACTCAGGCGAAGCCAGTCATTGA
TGATCACATCTACATCTTCGCCCTCCCGAAGACTGTGATAAATCCGTTTC
AGGTCAGCTGCGAGAGCGCTTTCCTCCATCATCGTGTCCAGCATGGTCTG
GGCGCCCTTGGCATGCATCCTTTCTGCAATGTCCAAAAGCGTACCAACTT
CCAAGCTTACATACCCACAGCGCCGTTCTTCATGCAGCAAAGCACGCGAA
AGACGCCCTAGTACATCTTCCAAATGATGGACACCCCGACTCCTTTCTAC
CGCATCGAGGCGCTCACAGGTCGTCGCAGTCGGTAATAACTTCACAGACC
TCTCGCCACTGTGGTTGCACGCGACCGATCTTTGCCGTGCTGCCGCACGG
GACATTGTGGGTAAGCACTGCTCTATCAATGAGTCTCTTGTCAGGGCTGT
GGGTGGTGTGCGTCCCATCGCCAAGATCACGTTGAAAAGCAGGACATCGT
CTGTCGCTATCTCCTTCGTGGCACTCGACGTAAGAACAGGGTAACTTAAA
TAACGAACGCGATCGATAGATATACGCAGAGGATGGCCACATAGGACGCT
TTTAGGACGGAAAAGGCGAGCGAAGACTTCTGGCGTCAAATTGAGGAAGT
CTTTCGCGCATCTGTACAGCGCCAAACTTGTTGATGTAGATTTGCCGGTT
GCAGAGTAAGGACTCAATCTTGGCAATGGTGGATACCGAAAAACCAACCT
CTGCCCCTTGTTGGCGTCATCGACCACCAATGCAATACCAAGCAGGGTCG
AAATCCCATCATGGGGCCACAGCTGCGGAGTCATGATGCTACTGACCACA
GGCGTTTCCCTTTACCCTATAGCTATTTGCAACGGGGAGGTTAGCTTAGA
GTGTGGCCAGTATGATGCGTAATTTGGCCATTTAAGCTGCGTTTGCGCAT
GGAAGACATGATCTCACTGTGTGTCAACCTTTTTGCCGTCAGTGTGCTAC
GCGACAGTGACGCAGTAGTCTGGAGAGAAGGCGACTGTACCGGAGGGCAG
AAGGCGTAAGGTTATTCGTCGCTTTCAGATGCTCGCGCAACCGACCTTGT
GGCGTCAGGCAGTATTACGGCGGTGGCTAGGCCTGTCCGCAACAAGTAGA
GCTTCCACAAATTTCGCAAAGAATGGACGGCAACCTCATCAGCAGTATAT
GCTCATACAAGGCACGATCCCGCAAGATGCGTGCTACCTTTTTTTTCGCC
TCGATAGCGATAGTCCTGCCTTTTTTTCTTTTGTGTCGATACAAGTCCGA
ATGATGTTATCCTCAGGATAACATGCTTATACTCACATGTAGAGTGACTT
GAGAAGGTGTAAAGGTACTTAAGATCTATTTGTGCGCCAAAGAAATTTGT
CAAAGGAAA back to topprotein sequence of rna6050 >rna6050-protein ID=rna6050-protein|Name=rna6050|organism=Nannochloropsis gaditana|type=polypeptide|length=729bp
MGNDVSSSITSIRSEEDRRQAIRRMDGALQKKLGKGVAHNLKIIIRGERG
SGKSALLSRLKGQPFTSSVYEPTPEIETATINWSAKEDGAVVKVEIWDVV
DKGLGRRGSLIGNNVRGTGTVAHDGGGDPDALAGLPLDVPVHAQRGHHAG
ASGSHAFGVLDATIVDVWKGSHGGIFMMNPFSSTALQYVQKQLAEVPRGI
PVLLLANFRDLLLDDTQEGRKLEEDTKHEGESVEAAPVRPRRVHFNLRDL
QEVSAEQTAQGRTCHAFACSMQNCFGLAQLYAYLNIPFLAMKGDVLERQL
SETRRVLSAMTLEVEEGIDRGSWGDYVAALRAKEEDHAPVIEKSNKEARK
PQSVRVLPDTVVPGTSRENTGVTRSKGEGHKPVGHVSSPAAAVASKHPRP
IQGDPQAWPGVTCRSTQGPQRSSVQESGLVDVEDFKFQPREGNEQNELTL
FLAEAEGGSTEDDMNEERRRQSLRSCLKPGSLASLSEAQRRATGVVGSGD
VREGDEGEEDEDLPAEEGEQRYVGLRPVNLPAKDISLSERGCNADRGKGS
LSDDQKKGLVGPLSVHEDGLGVWMTAQGKESDGKDDIDIPAGLPLPLHSL
DLSQADSSEGEDCDQGIFNRKIQQPGDSSLQRTGNNMEGSLSSFSNSSTT
AAPLPLEGLADKTDFVLSKAARAAIAATMEELNGRSPGEDLANGDLSRRE
QRSAGKMKTKASEGKRKRRNSSGNGGQSV back to topmRNA from alignment at CM002467.1:445525..447761- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6050 ID=rna6050|Name=rna6050|organism=Nannochloropsis gaditana|type=mRNA|length=2237bp|location=Sequence derived from alignment at CM002467.1:445525..447761- (Nannochloropsis gaditana)
TGAATAGGAATAGCGCGACAGCATGGGAAACGATGTTAGCTCCAGCATCA
CAAGCATACGATCAGAGGAGGACAGACGACAGGCGATTCGACGCATGGAT
GGGGCCCTTCAAAAGAAATTGGGCAAGGGGGTCGCACACAATTTGAAGAT
TATTATCAGAGGAGAACGCGGCAGCGGTAAAAGTGCTTTGCTCAGTAGAC
TTAAAGGTCAACCTTTTACATCTTCAGTATATGAGCCAACGCCTGAGATC
GAGACGGCGACCATTAATTGGAGCGCCAAAGAAGATGGTGCTGTGGTCAA
GGTAGAGATTTGGGACGTCGTTGACAAGGGGTTGGGCCGACGCGGTAGTT
TGATCGGAAATAATGTGAGGGGGACGGGCACTGTCGCGCACGACGGCGGC
GGTGACCCTGATGCTCTGGCAGGGCTTCCGCTCGACGTACCAGTGCACGC
CCAGCGCGGGCACCATGCAGGTGCTTCTGGGAGTCATGCATTTGGTGTAT
TGGATGCCACCATTGTAGACGTTTGGAAAGGGTCGCATGGAGGTATATTC
ATGATGAATCCTTTCTCCTCGACGGCGCTGCAATACGTCCAAAAGCAACT
CGCCGAGGTACCACGGGGCATTCCTGTCCTTTTGCTGGCGAACTTTCGAG
ATTTACTTCTTGACGACACGCAGGAGGGAAGGAAGCTTGAAGAGGACACC
AAACATGAGGGTGAATCGGTCGAAGCTGCTCCCGTTCGGCCTCGTCGAGT
ACATTTCAATTTGCGGGACCTGCAGGAAGTGAGCGCGGAGCAGACAGCTC
AGGGGAGGACTTGCCATGCTTTCGCTTGCTCCATGCAAAATTGTTTCGGT
TTAGCTCAACTCTATGCCTATCTCAACATTCCGTTTCTGGCTATGAAAGG
TGACGTGCTAGAGCGTCAACTGAGCGAGACTCGGCGGGTGCTCTCGGCCA
TGACGCTGGAAGTGGAGGAAGGGATCGACCGGGGGTCTTGGGGGGACTAT
GTGGCCGCTTTACGGGCCAAGGAAGAAGACCACGCCCCCGTGATCGAGAA
AAGTAACAAAGAAGCGCGGAAGCCGCAGAGCGTCAGGGTCCTCCCAGATA
CCGTCGTCCCAGGTACCTCGAGGGAAAACACTGGAGTGACTCGCAGCAAA
GGAGAGGGGCACAAGCCGGTCGGCCACGTCTCCTCGCCGGCGGCGGCGGT
GGCGTCAAAGCACCCCAGGCCGATCCAGGGAGACCCGCAAGCGTGGCCTG
GTGTTACTTGCAGATCGACGCAAGGGCCTCAGCGGTCCTCCGTGCAAGAA
AGTGGACTAGTGGACGTAGAGGACTTCAAATTTCAGCCGAGGGAGGGGAA
TGAACAGAATGAGCTGACGCTCTTTTTGGCGGAAGCTGAGGGGGGATCTA
CCGAGGACGATATGAACGAGGAGCGGAGGCGACAAAGCCTGAGGTCTTGC
TTGAAGCCAGGGTCGCTGGCGTCATTGAGCGAGGCACAGCGCCGGGCGAC
GGGTGTGGTCGGATCGGGAGACGTTAGGGAAGGAGATGAGGGAGAGGAGG
ACGAGGACCTGCCTGCCGAGGAGGGCGAGCAGCGCTACGTAGGGCTCAGG
CCGGTGAACTTGCCCGCTAAGGATATATCACTTTCTGAGCGTGGCTGTAA
TGCTGACAGAGGGAAGGGCTCTCTGTCCGATGACCAGAAAAAAGGGCTTG
TGGGGCCTTTGTCGGTGCATGAGGATGGGTTGGGGGTCTGGATGACAGCG
CAGGGAAAGGAGAGCGACGGAAAAGACGATATAGATATTCCCGCAGGGCT
TCCACTACCACTCCACTCTCTCGACCTCTCCCAGGCAGACTCATCTGAAG
GGGAGGATTGTGACCAAGGAATTTTTAACCGTAAAATTCAGCAACCTGGC
GACTCAAGTCTACAGAGGACTGGAAATAACATGGAAGGATCCTTGTCTTC
ATTTTCAAACTCTTCAACTACTGCAGCTCCTCTTCCTCTAGAAGGCCTGG
CCGACAAGACTGATTTTGTCCTCAGTAAAGCGGCTCGAGCGGCCATCGCC
GCCACAATGGAGGAATTGAACGGTCGATCGCCCGGGGAAGATTTAGCTAA
TGGGGACTTATCAAGACGAGAACAGCGGTCTGCCGGGAAAATGAAGACGA
AAGCCTCAGAGGGAAAACGGAAAAGGAGGAATAGCTCGGGAAATGGGGGA
CAATCTGTGTGATACGAAAGAAAGCCGAAAATCATGT back to topCoding sequence (CDS) from alignment at CM002467.1:445525..447761- >rna6050 ID=rna6050|Name=rna6050|organism=Nannochloropsis gaditana|type=CDS|length=2190bp|location=Sequence derived from alignment at CM002467.1:445525..447761- (Nannochloropsis gaditana)
ATGGGAAACGATGTTAGCTCCAGCATCACAAGCATACGATCAGAGGAGGA
CAGACGACAGGCGATTCGACGCATGGATGGGGCCCTTCAAAAGAAATTGG
GCAAGGGGGTCGCACACAATTTGAAGATTATTATCAGAGGAGAACGCGGC
AGCGGTAAAAGTGCTTTGCTCAGTAGACTTAAAGGTCAACCTTTTACATC
TTCAGTATATGAGCCAACGCCTGAGATCGAGACGGCGACCATTAATTGGA
GCGCCAAAGAAGATGGTGCTGTGGTCAAGGTAGAGATTTGGGACGTCGTT
GACAAGGGGTTGGGCCGACGCGGTAGTTTGATCGGAAATAATGTGAGGGG
GACGGGCACTGTCGCGCACGACGGCGGCGGTGACCCTGATGCTCTGGCAG
GGCTTCCGCTCGACGTACCAGTGCACGCCCAGCGCGGGCACCATGCAGGT
GCTTCTGGGAGTCATGCATTTGGTGTATTGGATGCCACCATTGTAGACGT
TTGGAAAGGGTCGCATGGAGGTATATTCATGATGAATCCTTTCTCCTCGA
CGGCGCTGCAATACGTCCAAAAGCAACTCGCCGAGGTACCACGGGGCATT
CCTGTCCTTTTGCTGGCGAACTTTCGAGATTTACTTCTTGACGACACGCA
GGAGGGAAGGAAGCTTGAAGAGGACACCAAACATGAGGGTGAATCGGTCG
AAGCTGCTCCCGTTCGGCCTCGTCGAGTACATTTCAATTTGCGGGACCTG
CAGGAAGTGAGCGCGGAGCAGACAGCTCAGGGGAGGACTTGCCATGCTTT
CGCTTGCTCCATGCAAAATTGTTTCGGTTTAGCTCAACTCTATGCCTATC
TCAACATTCCGTTTCTGGCTATGAAAGGTGACGTGCTAGAGCGTCAACTG
AGCGAGACTCGGCGGGTGCTCTCGGCCATGACGCTGGAAGTGGAGGAAGG
GATCGACCGGGGGTCTTGGGGGGACTATGTGGCCGCTTTACGGGCCAAGG
AAGAAGACCACGCCCCCGTGATCGAGAAAAGTAACAAAGAAGCGCGGAAG
CCGCAGAGCGTCAGGGTCCTCCCAGATACCGTCGTCCCAGGTACCTCGAG
GGAAAACACTGGAGTGACTCGCAGCAAAGGAGAGGGGCACAAGCCGGTCG
GCCACGTCTCCTCGCCGGCGGCGGCGGTGGCGTCAAAGCACCCCAGGCCG
ATCCAGGGAGACCCGCAAGCGTGGCCTGGTGTTACTTGCAGATCGACGCA
AGGGCCTCAGCGGTCCTCCGTGCAAGAAAGTGGACTAGTGGACGTAGAGG
ACTTCAAATTTCAGCCGAGGGAGGGGAATGAACAGAATGAGCTGACGCTC
TTTTTGGCGGAAGCTGAGGGGGGATCTACCGAGGACGATATGAACGAGGA
GCGGAGGCGACAAAGCCTGAGGTCTTGCTTGAAGCCAGGGTCGCTGGCGT
CATTGAGCGAGGCACAGCGCCGGGCGACGGGTGTGGTCGGATCGGGAGAC
GTTAGGGAAGGAGATGAGGGAGAGGAGGACGAGGACCTGCCTGCCGAGGA
GGGCGAGCAGCGCTACGTAGGGCTCAGGCCGGTGAACTTGCCCGCTAAGG
ATATATCACTTTCTGAGCGTGGCTGTAATGCTGACAGAGGGAAGGGCTCT
CTGTCCGATGACCAGAAAAAAGGGCTTGTGGGGCCTTTGTCGGTGCATGA
GGATGGGTTGGGGGTCTGGATGACAGCGCAGGGAAAGGAGAGCGACGGAA
AAGACGATATAGATATTCCCGCAGGGCTTCCACTACCACTCCACTCTCTC
GACCTCTCCCAGGCAGACTCATCTGAAGGGGAGGATTGTGACCAAGGAAT
TTTTAACCGTAAAATTCAGCAACCTGGCGACTCAAGTCTACAGAGGACTG
GAAATAACATGGAAGGATCCTTGTCTTCATTTTCAAACTCTTCAACTACT
GCAGCTCCTCTTCCTCTAGAAGGCCTGGCCGACAAGACTGATTTTGTCCT
CAGTAAAGCGGCTCGAGCGGCCATCGCCGCCACAATGGAGGAATTGAACG
GTCGATCGCCCGGGGAAGATTTAGCTAATGGGGACTTATCAAGACGAGAA
CAGCGGTCTGCCGGGAAAATGAAGACGAAAGCCTCAGAGGGAAAACGGAA
AAGGAGGAATAGCTCGGGAAATGGGGGACAATCTGTGTGA back to top
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