EWM24661.1, cds6024 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24661.1 vs. NCBI_GenBank
Match: gi|585106183|gb|EWM24661.1| (histidine triad nucleotide binding protein [Nannochloropsis gaditana]) HSP 1 Score: 431.409 bits (1108), Expect = 3.126e-153 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 Query: 1 MPCNLLNAARMGNLLTKGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKDKQPDVNLSKMQFCFHIEPFNSIAHIHLHCQVPPFITPISAFKYKEGTSWCWSHDAVCSHVAIETTTRGCPATACYCKAFRWIYLFIKSLHNWWTILCRVQK 205 MPCNLLNAARMGNLLTKGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKDKQPDVNLSKMQFCFHIEPFNSIAHIHLHCQVPPFITPISAFKYKEGTSWCWSHDAVCSHVAIETTTRGCPATACYCKAFRWIYLFIKSLHNWWTILCRVQK Sbjct: 1 MPCNLLNAARMGNLLTKGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKDKQPDVNLSKMQFCFHIEPFNSIAHIHLHCQVPPFITPISAFKYKEGTSWCWSHDAVCSHVAIETTTRGCPATACYCKAFRWIYLFIKSLHNWWTILCRVQK 205
BLAST of EWM24661.1 vs. NCBI_GenBank
Match: gi|873218111|emb|CEM40143.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 121.709 bits (304), Expect = 2.493e-30 Identity = 67/167 (40.12%), Postives = 95/167 (56.89%), Query Frame = 0 Query: 15 LTKGVTYEADNVTIKRCLFCDIAADKQ--GSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKDKQPDVNLSK-----------------MQFCFHIEPFNSIAHIHLHCQVPPFITPISAFKYKEGTSWCWSHDAVCS 162 L K VTY + + +C+FC IA+ ++ + K + YEDE V+ FAP E +L H LV P+ HIRN TL + +P+L +MR VG QV D+ K +QF FH P++S+ H+HLHC V PFI+P+ KY++ TSWC S+DA+ S Sbjct: 54 LYKSVTY-GEYGEVLKCVFCRIASGEELPANGKGSVLYEDESVISFAPREPASLVHILVCPKKHIRNCRTLDSSHVPLLDHMRRVGQQVAADEFAKTRTRKKGSRSHDSMAGTPFDDRLQFSFHAPPWHSVDHLHLHCFVKPFISPVLWVKYRQDTSWCVSYDAIRS 219
BLAST of EWM24661.1 vs. NCBI_GenBank
Match: gi|1214710004|gb|OWZ21133.1| (hypothetical protein PHMEG_0004347 [Phytophthora megakarya]) HSP 1 Score: 111.309 bits (277), Expect = 8.909e-26 Identity = 72/195 (36.92%), Postives = 91/195 (46.67%), Query Frame = 0 Query: 17 KGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKD-KQPDVNL----------------------SKMQFCFHIEPFNSIAHIHLHCQVPPFITP------ISAFKYKEGTSWCWSHDAVCSHVAIETTTRGCPATACYCKA 182 KGVTY D + RC FC+I S P YEDE VVVF PL + H LVVPR HIRN L P+D +L++MR+V VL+D +P V L S +F FH PFNSI H+H+H F T + + KY+ T WC S D V + + RG A+ A Sbjct: 120 KGVTYGHDGA-LMRCRFCEILE----SGDEPFLYEDEDVVVFRPLAPVVVSHILVVPRRHIRNVNKLTPSDAELLRHMREVAAMVLRDLPRPTVMLAPSKAERAHNITEDLTDEEDLESDFKFAFHSPPFNSIDHVHMHA----FRTRDGRFGCVGSIKYRTETWWCRSFDEVMTRLGRSRKQRGSDASTVESDA 305
BLAST of EWM24661.1 vs. NCBI_GenBank
Match: gi|298710705|emb|CBJ32129.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.457 bits (267), Expect = 1.251e-25 Identity = 57/167 (34.13%), Postives = 91/167 (54.49%), Query Frame = 0 Query: 13 NLLTKGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKDKQPDVNLSKMQFCFHIEPFNSIAHIHLHCQVPPFITPISAFKYKEGTSWCWSHDAV---CSHVAIETTTRGCPAT 176 ++++KGV + A ++ CLFCD A +++ + YED+ V+ F+PL+ A +H LVVP+ HI L TD P+L M++V ++LK + S+ Q FHI P+NS+ H+HLH PF++ + ++ EG WC S + V S + P T Sbjct: 33 DIVSKGVVWNARG-EMQSCLFCDFA---NHTKEKELLYEDDLVIAFSPLKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLK-----CDASQTQLSFHIPPWNSVDHLHLHALETPFLSWWNGLRFSEGKPWCASFEGVRYWASGAGAQEEKESVPET 190
BLAST of EWM24661.1 vs. NCBI_GenBank
Match: gi|1173944025|gb|OQR92807.1| (hypothetical protein ACHHYP_03179 [Achlya hypogyna]) HSP 1 Score: 103.219 bits (256), Expect = 1.565e-23 Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 0 Query: 5 LLNAARMG-NLLTKGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKDKQPDVNLSKMQFCFHIEPFNSIAHIHLHCQVPPFITPISAFKYKEGTSWCWSHDAVCSHVAIETTTRGC---PAT 176 ++NA +G + + KGV Y N + C FC I A + + Y++E + VF PL + H LVVP+ H+RN L P+ L +L M++V VL+ ++ FH PFNSI H+H+H V T + KYK GT WC S V + + +T G PAT Sbjct: 25 VVNAQELGGDYVKKGVAYSKANRDVLCCKFCHIVA----ACSDEVIYDEEHISVFRPLHPASASHILVVPKHHVRNINQLTPSHLALLVRMKEVATYVLQQLGYYTESRRLHLAFHSPPFNSIDHVHMHAMVASRRTALGCVKYKTGTWWCRSFGYVVNKLVAQTQKDGTMPIPAT 196
BLAST of EWM24661.1 vs. NCBI_GenBank
Match: gi|301122179|ref|XP_002908816.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262099578|gb|EEY57630.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 103.99 bits (258), Expect = 4.985e-23 Identity = 67/177 (37.85%), Postives = 84/177 (47.46%), Query Frame = 0 Query: 17 KGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKD-KQPDVNL--------------------SKMQFCFHIEPFNSIAHIHLHCQVPPFITP------ISAFKYKEGTSWCWSHDAVCSHVAI 166 KGVTY D + C FC+I S P YEDE VVVF PL + H LVVPR HIRN L P D +L+ MR+V VL+D +P V L S +F FH PFNSI H+H+H F T + + KY+ T WC S D V + + + Sbjct: 128 KGVTYSHDGALVH-CRFCEILE----SGDEPFLYEDEDVVVFRPLAPVVVSHILVVPRRHIRNVNKLTPDDAALLRRMREVAANVLRDMPRPTVMLAPPKAERAHVTADCTDEDSESDFKFAFHSPPFNSIDHVHMHA----FRTRDGRFGCVGSIKYRTETWWCRSFDEVMTRLGL 295
BLAST of EWM24661.1 vs. NCBI_GenBank
Match: gi|552922141|gb|ESA06430.1| (hypothetical protein GLOINDRAFT_34201 [Rhizophagus irregularis DAOM 181602] >gi|595439146|gb|EXX52638.1| hypothetical protein RirG_251360 [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 98.9821 bits (245), Expect = 6.856e-23 Identity = 51/142 (35.92%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 27 TIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKDKQPDVNLSKMQFCFHIEPFNSIAHIHLHCQVPPFITPISAFKYKEGTSWCWSHDAVCSHVAIET 168 T + C+FCD+ K I YEDE++V F + A H L++PR HI N +L P D P+LK+M D G Q+L + LS+ + FH+ P+NS+ H+HLHC P+ + KY E W S + + ++ T Sbjct: 12 TTQDCVFCDLTDKK-------IVYEDERIVAFHDISPAAKLHLLIIPRNHIDNVDSLTPNDAPLLKHMIDTGNQLL--SESGYQLSERRVGFHVPPYNSVHHLHLHCIGLPYRNIFYSTKYTELVHWYSSGEKILKSLSSST 144
BLAST of EWM24661.1 vs. NCBI_GenBank
Match: gi|1173927673|gb|OQR81532.1| (hypothetical protein THRCLA_23352 [Thraustotheca clavata]) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-22 Identity = 64/202 (31.68%), Postives = 97/202 (48.02%), Query Frame = 0 Query: 5 LLNAARMG-NLLTKGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKD----KQPDVNLSKMQFCFHIEPFNSIAHIHLHCQVPPFITPISAFKYKEGTSWCWSHDAVCSHVAIETTTRGCPATACYCKAFRWIYLFIKSLHNWWTILC 201 ++NA +G + + KGV Y + + C FC I A + + Y++E + VF PL + H LVVP+ H+RN L PT L +L M++V VL + + D +K+ FH PFNSI H+H+H V T + + KYK GT WC S+ V + + ++ + +A S H T LC Sbjct: 24 VVNANELGGDYVKKGVAYSNRDKDVMCCKFCHIVA----ACTNEVIYDEEHISVFRPLHPASKSHILVVPKHHLRNINYLTPTHLSLLMRMKEVAEYVLSELGYCNKYD---AKLHLAFHSPPFNSIDHVHMHAMVKTRRTALGSVKYKTGTWWCRSYTYVVNRLLVKQREKSSSTIVARPRAL--------SFHGRETSLC 210
BLAST of EWM24661.1 vs. NCBI_GenBank
Match: gi|675203097|ref|XP_008910433.1| (hypothetical protein PPTG_15145 [Phytophthora parasitica INRA-310] >gi|566016793|gb|ETI39704.1| hypothetical protein F443_14718 [Phytophthora parasitica P1569] >gi|567954220|gb|ETK79858.1| hypothetical protein L915_14337 [Phytophthora parasitica] >gi|567982874|gb|ETL33277.1| hypothetical protein L916_14242 [Phytophthora parasitica] >gi|568012386|gb|ETL86564.1| hypothetical protein L917_14033 [Phytophthora parasitica] >gi|568042398|gb|ETM39729.1| hypothetical protein L914_14159 [Phytophthora parasitica] >gi|568089664|gb|ETN04506.1| hypothetical protein PPTG_15145 [Phytophthora parasitica INRA-310] >gi|570320524|gb|ETO68472.1| hypothetical protein F444_14722 [Phytophthora parasitica P1976] >gi|570944346|gb|ETP09603.1| hypothetical protein F441_14576 [Phytophthora parasitica CJ01A1] >gi|570975763|gb|ETP37701.1| hypothetical protein F442_14534 [Phytophthora parasitica P10297]) HSP 1 Score: 102.834 bits (255), Expect = 1.318e-22 Identity = 63/173 (36.42%), Postives = 82/173 (47.40%), Query Frame = 0 Query: 17 KGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKD-KQPDVNL--------------------SKMQFCFHIEPFNSIAHIHLHC--QVPPFITPISAFKYKEGTSWCWSHDAVCSHVAI 166 KGVTY D + C FC+I S P YEDE +VVF PL + H LVVPR HIRN L P D +L+ MR+V VL++ +P V L S +F FH PFNSI H+H+H + + KY+ T WC S D V + + + Sbjct: 129 KGVTYGHDGALVH-CRFCEILE----SGDEPFLYEDEDIVVFRPLAPVVVSHILVVPRRHIRNVNKLTPDDAALLRRMREVAASVLREMPRPSVMLAPSKAERAHISTDSTDEDSESDFKFAFHSPPFNSIDHVHMHAFRTRDGRFGAVGSIKYRTETWWCRSFDEVMTRLGL 296
BLAST of EWM24661.1 vs. NCBI_GenBank
Match: gi|970635210|gb|KUF80173.1| (Histidine triad nucleotide-binding protein 3 [Phytophthora nicotianae] >gi|970644136|gb|KUF85110.1| Histidine triad nucleotide-binding protein 3 [Phytophthora nicotianae]) HSP 1 Score: 102.449 bits (254), Expect = 1.486e-22 Identity = 63/173 (36.42%), Postives = 82/173 (47.40%), Query Frame = 0 Query: 17 KGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKD-KQPDVNL--------------------SKMQFCFHIEPFNSIAHIHLHC--QVPPFITPISAFKYKEGTSWCWSHDAVCSHVAI 166 KGVTY D + C FC+I S P YEDE +VVF PL + H LVVPR HIRN L P D +L+ MR+V VL++ +P V L S +F FH PFNSI H+H+H + + KY+ T WC S D V + + + Sbjct: 125 KGVTYGHDGALVH-CRFCEILE----SGDEPFLYEDEDIVVFRPLAPVVVSHILVVPRRHIRNVNKLTPDDAALLRRMREVAASVLREMPRPSVMLAPSKAERAHISTDSTDEDSESDFKFAFHSPPFNSIDHVHMHAFRTRDGRFGAVGSIKYRTETWWCRSFDEVMTRLGL 292 The following BLAST results are available for this feature:
BLAST of EWM24661.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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