|
|
Properties
| Property Name | Value |
|---|
| Product | biotin lipoate protein ligase-like protein |
| Orig transcript id | gnl|cribi|Naga_100055g16.7333.mrna |
| Orig protein id | gnl|cribi|Naga_100055g16.7333 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:425553..427617 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6038 ID=rna6038|Name=rna6038|organism=Nannochloropsis gaditana|type=mRNA|length=546bp
ATGGCCGAAAGGGTCGTGCTCTTCCATGTATTTGACCATATCCTACTTCT
ACGTTGTTGTAACAAGGATATTCTGCCTGACGTAGTATTTTTATTCTGGG
CTTTCACCGTACACGTACTCAGATCGCCGAGGCGACATTCACCTGGAGTG
CGCCACCTCTGCGCCGTTGACTTCGCTTCGATCACATCATTCGGGCGCGA
AGCAGTGGCAGTTCAGGTGGCATCGGTGGGGGATACATCAGTGGTAAGAA
CATCCACCGCCACCGCAACATCTCCTGCAGACCATTACCTCGCAAATTTC
TCGATGGCGGATTGGGACGAGCTGAAACGTAAAGTTCGTGGAATTGAGAA
TAAGTTGGAGGGAAAATGCCAGAAATTTTCGTTGATGGCACAGAGTAGCA
ATGGAGACACACGTCATGATGAAGAAAACCCGCTTTTGCAAGATTCAGAA
GAGCTGAACATCGTCGCGGAGATCGAAAGTTTGCTTGCGGCGGTAAGAGA
TTTACAATCATGCATAGATCCATCAAATTTGGGGTATGACAGATAA back to topprotein sequence of rna6038 >rna6038-protein ID=rna6038-protein|Name=rna6038|organism=Nannochloropsis gaditana|type=polypeptide|length=355bp
MHLHRFTVNRISLRLTVACACCCVFANTSGTAVSAAFVAVGFSSSVSFRL
APSIVPSRNPPVLGIQSGSARAGKERRCHSATSMSAFAAGEDIEVGDGTL
LHFVWVPEVRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTS
GRAWMGGAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRILPH
PEAQARVQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHV
PSLGADRGRRAACLAQCGLEGRGGDTARDLSIAIAVSITTWLGGSQEDTA
DSVIADWEKLATWGKVYDLRDGGAVVPLALETDGRLRVRDLTSGATRLLT
AEYLH back to topmRNA from alignment at CM002467.1:425553..427617+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6038 ID=rna6038|Name=rna6038|organism=Nannochloropsis gaditana|type=mRNA|length=2065bp|location=Sequence derived from alignment at CM002467.1:425553..427617+ (Nannochloropsis gaditana)
CGGAGGGAAACACAACTTTACTGGCTACAACATCTGAGCACTGCATTCTT
ATCGTTGAGAGGGATAATAAATGCATAGAACTTGGAAAAGTTTGCGTGCG
CAAACAGAGGGACCAAAGGGGTGGTGCAACATTCCAATGATCGAGCAACG
AAGCTGCTGGTGAAAGGCGACAGCACTGAGAGCGACACGATTTGTCTGCC
GCATTTTTGGACCAAGGCGTCACGCAGAAGGTGTTCAATTCTATCACAGA
GCGTAAGCGCTGTAGATTCACCGTTAAGGATCGATGCCTGTGCCTCAAAT
AAGGGTACAACGAGCTTCTTTAGTGGTTCTCCAGGGTGCAGAAACAGGGA
AGCCGCAAATCATTAGCCAGCGAGCGTTTCGTGCTACCCTTTCACATATA
AATTAATTATCGTTTCACTGGTCTCTTATTTTTAAAATCCATTGCCAGAG
AACAGTCCGGAAATTTTGTTTTAGTAGTGCATGGGAGAAGCCCTGTCCTA
TTTAGCACAGtgcccccccaaaaaaactcTTCGAAATCCTTTGCAGCCGA
AGCTGCGGTCAGATGACTAGTTTATGAATTGTTTTGGCATTACTGTTCTC
TGTTAGCAGGTCGCAAAGCAAAGCGAAGGATAGATTCACACCTTttcacc
tctctttcttcaccttgcaggcggaggcttGCTTTCCGCAGTTGAGCTAC
AGAGCGTTCTATGCATCTGCACAGGTTTACGGTAAACCGGATTTCGTTGC
GCTTAACCGTGGCGTGTGCGTGCTGTTGTGTCTTTGCCAATACTTCTGGA
ACAGCTGTGAGCGCAGCCTTTGTAGCGGTCGGTTTCTCTTCATCGGTTTC
ATTCCGGCTTGCGCCTTCTATCGTCCCGTCGCGGAATCCACCGGTGCTCG
GTATTCAGTCTGGAAGCGCAAGGGCGGGTAAGGAAAGACGCTGCCACTCA
GCTACCTCCATGAGCGCTTTTGCTGCTGGTGAGGACATCGAAGTCGGTGA
TGGAACACTGCTCCATTTTGTTTGGGTTCCGGAAGTCAGGTCTACTCAGG
ATGCAATGAGGACGCTGCTCGCAAGCAGCCGCCGGGACTCGCTCTCCCAA
AAAGGAGTTGACGCCTTAGCGCTGAGTGCAGGGTCCCAAATTCAGGGTCG
GGGGACGAGCGGCCGCGCTTGGATGGGCGGCGCGGGGAATATGTTTTTGA
CTGTGGCGCTTCCAGCGAGGACCCTGTCCGCCCTGACGTACCCGATCacg
ctgcttcctcttcggatGGGAACGTTGATCGCACGGGAGATTGTTCGCAT
TCTGCCCCACCCCGAGGCTCAAGCGAGAGTGCAGCTAAAGTGGCCCAACG
ACGTGCTACTTGACGACGGGAAAGTGAGCGGCCTATTGATCGAAATGGAC
GGCACATCCTCCTACTATCTTGTCGGCATTGGCGTCAACGTGGCTCAAGC
GCCTCACGTACCATCCTTGGGCGCGGATCGCGGCCGGCGAGCGGCCTGCT
TGGCGCAGTGTGGCTTGGAAGGTAGGGGCGGAGATACAGCCAGGGACTTG
TCCATCGCCATCGCAGTCTCCATTACTACGTGGTTAGGGGGGTCTCAGGA
GGATACAGCAGACTCTGTGATTGCAGACTGGGAAAAGCTTGCGACGTGGG
GGAAAGTGTACGATCTTCGGGACGGTGGGGCAGTCGTCCCATTAGCGCTG
GAAACGGATGGAAGACTGCGCGTGAGAGACCTTACCTCCGGGGCTACACG
TCTCTTGACGGCTGAGTACCTGCATTAAACACGTAGACACGTTTAAATAT
AGACGTGTTTCTGGAGCATTGTACGCAAACACGGATATGAAATCCCTTGT
GAATAGAATTTGTAAAGCGACACACAGTACGCGCATTGGGGCAATTCGTG
TCAGATGACATTTTCTCCCGTGTACAGATACAACACATGCTTTCTCTGAA
CGAATTTCTTGTTGCGTGGTTCAAATGCCTTATTTTTGGACACGACATAA
TATTGTCCACCAGTTATGAAGGGATTTAATAAATAAATAAATCCATCTAA
AAGCCTTGCAATAAC back to topCoding sequence (CDS) from alignment at CM002467.1:425553..427617+ >rna6038 ID=rna6038|Name=rna6038|organism=Nannochloropsis gaditana|type=CDS|length=1068bp|location=Sequence derived from alignment at CM002467.1:425553..427617+ (Nannochloropsis gaditana)
ATGCATCTGCACAGGTTTACGGTAAACCGGATTTCGTTGCGCTTAACCGT
GGCGTGTGCGTGCTGTTGTGTCTTTGCCAATACTTCTGGAACAGCTGTGA
GCGCAGCCTTTGTAGCGGTCGGTTTCTCTTCATCGGTTTCATTCCGGCTT
GCGCCTTCTATCGTCCCGTCGCGGAATCCACCGGTGCTCGGTATTCAGTC
TGGAAGCGCAAGGGCGGGTAAGGAAAGACGCTGCCACTCAGCTACCTCCA
TGAGCGCTTTTGCTGCTGGTGAGGACATCGAAGTCGGTGATGGAACACTG
CTCCATTTTGTTTGGGTTCCGGAAGTCAGGTCTACTCAGGATGCAATGAG
GACGCTGCTCGCAAGCAGCCGCCGGGACTCGCTCTCCCAAAAAGGAGTTG
ACGCCTTAGCGCTGAGTGCAGGGTCCCAAATTCAGGGTCGGGGGACGAGC
GGCCGCGCTTGGATGGGCGGCGCGGGGAATATGTTTTTGACTGTGGCGCT
TCCAGCGAGGACCCTGTCCGCCCTGACGTACCCGATCacgctgcttcctc
ttcggatGGGAACGTTGATCGCACGGGAGATTGTTCGCATTCTGCCCCAC
CCCGAGGCTCAAGCGAGAGTGCAGCTAAAGTGGCCCAACGACGTGCTACT
TGACGACGGGAAAGTGAGCGGCCTATTGATCGAAATGGACGGCACATCCT
CCTACTATCTTGTCGGCATTGGCGTCAACGTGGCTCAAGCGCCTCACGTA
CCATCCTTGGGCGCGGATCGCGGCCGGCGAGCGGCCTGCTTGGCGCAGTG
TGGCTTGGAAGGTAGGGGCGGAGATACAGCCAGGGACTTGTCCATCGCCA
TCGCAGTCTCCATTACTACGTGGTTAGGGGGGTCTCAGGAGGATACAGCA
GACTCTGTGATTGCAGACTGGGAAAAGCTTGCGACGTGGGGGAAAGTGTA
CGATCTTCGGGACGGTGGGGCAGTCGTCCCATTAGCGCTGGAAACGGATG
GAAGACTGCGCGTGAGAGACCTTACCTCCGGGGCTACACGTCTCTTGACG
GCTGAGTACCTGCATTAA back to top
|