EWM24649.1, cds6023 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24649.1 vs. NCBI_GenBank
Match: gi|585106171|gb|EWM24649.1| (biotin lipoate protein ligase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 714.916 bits (1844), Expect = 0.000e+0 Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0 Query: 1 MHLHRFTVNRISLRLTVACACCCVFANTSGTAVSAAFVAVGFSSSVSFRLAPSIVPSRNPPVLGIQSGSARAGKERRCHSATSMSAFAAGEDIEVGDGTLLHFVWVPEVRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRILPHPEAQARVQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLRDGGAVVPLALETDGRLRVRDLTSGATRLLTAEYLH 355 MHLHRFTVNRISLRLTVACACCCVFANTSGTAVSAAFVAVGFSSSVSFRLAPSIVPSRNPPVLGIQSGSARAGKERRCHSATSMSAFAAGEDIEVGDGTLLHFVWVPEVRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRILPHPEAQARVQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLRDGGAVVPLALETDGRLRVRDLTSGATRLLTAEYLH Sbjct: 1 MHLHRFTVNRISLRLTVACACCCVFANTSGTAVSAAFVAVGFSSSVSFRLAPSIVPSRNPPVLGIQSGSARAGKERRCHSATSMSAFAAGEDIEVGDGTLLHFVWVPEVRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRILPHPEAQARVQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLRDGGAVVPLALETDGRLRVRDLTSGATRLLTAEYLH 355
BLAST of EWM24649.1 vs. NCBI_GenBank
Match: gi|298708896|emb|CBJ30853.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 184.111 bits (466), Expect = 4.099e-52 Identity = 118/299 (39.46%), Postives = 159/299 (53.18%), Query Frame = 0 Query: 102 HFVWVPEVRSTQDAMRTLLASSRRDSLSQKGVDA---LALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRILPHPEAQ------------------------------------------ARVQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLRDGG-AVVPLALETDGRLRVRDLTSGATRLLTAEYL 354 F W+ V ST D ++TL+ ++Q+G DA A++A Q++GRGT GRAW+G GN+FLTVA+P L + P++L+PLR+GTLIA EI R LP + RV LKWPNDVLL KV+G+LIE + + LVGIGVNV P VP G DRGR AACLA G + + R+LS A+ + +W G+ D+A + +A+W + W ++RD G AV P+ + DGRLRV D +G LLT EYL Sbjct: 17 RFTWLESVNSTMDEVKTLI-------VNQEGSDAKRVFAVAAREQLRGRGTKGRAWIGLPGNVFLTVAIP---LDRVPVPLSLIPLRVGTLIAPEIQRRLPRHRQEERPPLSPPPSPSASPREARTAEAAEPEPEPKPEPEPKPEPEPPRVSLKWPNDVLLGGSKVAGVLIEAE--LPFLLVGIGVNVRNKPEVPQNGPDRGRPAACLADFGADS-TDEAVRELSAALTEKLCSWASGT--DSASTAVAEWSRWVDWSLPLEIRDEGRAVRPIGVAPDGRLRVVDPATGEEELLTTEYL 300
BLAST of EWM24649.1 vs. NCBI_GenBank
Match: gi|676387557|ref|XP_009037057.1| (hypothetical protein AURANDRAFT_64251 [Aureococcus anophagefferens] >gi|323452461|gb|EGB08335.1| hypothetical protein AURANDRAFT_64251 [Aureococcus anophagefferens]) HSP 1 Score: 159.458 bits (402), Expect = 5.130e-43 Identity = 115/289 (39.79%), Postives = 148/289 (51.21%), Query Frame = 0 Query: 69 SARAGKERRCHSATSMSAFAAGEDIEVGDGTLLHFVWVPEVRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMG-GAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRILPHPEAQARVQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDT-ARDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLRDGGAVV-PLALETDGRLRVRDLTSGATRLLTAEYL 354 +A +G+ R A S AF + W+ E +STQDA + +L + + +A++ Q GRGT GR W G GN+ LTVAL R L P+TL+PLR+G +AR + L A V LKWPNDVLL+ KV G+LIE DG + LVG+G+NVA P VP G +RGR A LA CG + A+DL A ++TW G D A +++A W W LRD VV P+ L DGRLRVR G R L AEYL Sbjct: 11 AAHSGRRRMAAQAQSCDAF--------------EWHWLRETKSTQDAAKQILKQRVVGNSNGHDGKHVAVATAHQTAGRGTRGRTWNDDGRGNVALTVALDMRHLP--LKPVTLVPLRVGVEVARVLADHLEDAPGCA-VSLKWPNDVLLNGKKVCGVLIEADGDA--LLVGVGINVATHPDVPQAGPERGREATSLAACGATSADAEAIAKDL----AAHLSTWADGV--DDAPTLVAHWSHFVDWSLPLTLRDTSEVVSPVRLLPDGRLRVRPAAGGPERDLVAEYL 274
BLAST of EWM24649.1 vs. NCBI_GenBank
Match: gi|1210519482|dbj|GAX21606.1| (hypothetical protein FisN_29Hh040 [Fistulifera solaris]) HSP 1 Score: 147.902 bits (372), Expect = 1.595e-38 Identity = 106/267 (39.70%), Postives = 150/267 (56.18%), Query Frame = 0 Query: 101 LHFVWVPE-VRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRILPHPEAQARVQLKWPNDVLLDDGKVSGLLIEM---DGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLR---------DGGAVVPLALETDGRLRVRDLTSGATRLLTAEYL 354 L F++ E V ST D MRTLL L+++ +AL A +Q GRGT GR W +GN++LTVALP + P+TLLPL++G ++A + +L + A+V +KWPNDVL++D KVSG LIE + S++LVGIGVNVA+ P + L R L + E D A L + IA ++ W+ + D ++ +W K A +GK Y+LR +G VV + +E DG+LRVRD G RLL A+YL Sbjct: 21 LQFIYKTEPVTSTHDEMRTLL-------LNREEHTCVALVATTQTTGRGTQGRVWKAASGNLYLTVALPH-----VPVPLTLLPLQVGMVVAERVQALLKACSSTAKVTVKWPNDVLIEDAKVSGCLIEHFTNERNLSWFLVGIGVNVAETPPLQDLPGFHKRAPTSLHEWCPEA-SSDMASVLGLEIANALADWIMEEKND-GQPIVEEWRKWAEFGKSYELRGSVVDEEGHEGEVVVTVDIEADGQLRVRD-RQGRERLLVADYL 272
BLAST of EWM24649.1 vs. NCBI_GenBank
Match: gi|1210526346|dbj|GAX14834.1| (hypothetical protein FisN_29Lh040 [Fistulifera solaris]) HSP 1 Score: 144.436 bits (363), Expect = 1.047e-37 Identity = 95/254 (37.40%), Postives = 138/254 (54.33%), Query Frame = 0 Query: 116 MRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRILPH-PEAQARVQLKWPNDVLLDDGKVSGLLIEM---DGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEKLATWGKVYDLR-----------DGGAVVPLALETDGRLRVRDLTSGATRLLTAEYL 354 MRT+L + + +AL A +Q +GRGT GR W +GN++LTVALP +S +TLLPL +G ++A+ + IL ++ +V +KWPNDVL+ D KVSG LIE + S++LVGIGVNVA+ P + L R L + E +A L + IA ++ W ++ D ++ +W A +GK Y+LR +G VV + +E DG+LRVRD G RLL A+YL Sbjct: 1 MRTILQNKDEHT-------CVALVATTQTEGRGTQGRVWKAASGNLYLTVALPQVPVS-----LTLLPLHVGIVVAQRVQAILKACHSSEPKVTVKWPNDVLIHDAKVSGCLIEHFTNERNLSWFLVGIGVNVAETPPLQGLPGSHKRLPTSLHEWCPEASAMASA--LGLDIANALADWSHANKND-GQQIVQEWRTWAEFGKTYELRGSVVDEEQGGFEGEVVVTVDIEADGQLRVRD-QQGRERLLVADYL 238
BLAST of EWM24649.1 vs. NCBI_GenBank
Match: gi|219120867|ref|XP_002185665.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582514|gb|ACI65135.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 133.265 bits (334), Expect = 2.407e-32 Identity = 95/275 (34.55%), Postives = 146/275 (53.09%), Query Frame = 0 Query: 109 VRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGA--GNMFLTVALPARTLSALTYPITLLPLRMGTLIAREIVRILPH-PEAQ---------ARVQLKWPNDVLLDDGKVSGLLIEMDGTS--SYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTARDLSIAIAVSITTWLGGSQED---TADSVIADWEKLATWGKVYDLR-----------DGGAVVPLALETDGRLRVRDLTSGATRLLTAEYLH 355 V STQD R +L + RD+ ++ +A+ A Q QGRGT GR W GG+ GN++LT+ +P ++ ITLLPL++ LIA+ + R+L PE + A+ +KWPNDVL+++ K++G LIE + +++L+GIGVNVA AP + + R A C+ TA L +A + W ++ D VI +W+ L+ +GK Y+LR G AV + ++ DG+L VR + G RLL A+Y+ Sbjct: 69 VGSTQDEARAILHA--RDASDRE--RCIAVIADEQTQGRGTQGRKWEGGSRKGNLYLTIGIP---FDSIRSKITLLPLQIAVLIAQRVKRLLDACPEGEDDGVRRQIGAKTTVKWPNDVLVNEKKLAGTLIENESVDQRTWFLIGIGVNVAFAPGLTESPGKQIREATCIQDFCPSTLPESTALALGTDMARGLVEWALDTETDRFVKETKVIEEWKALSEFGKTYELRGEVVDENSGTYQGEAVTLVDIQDDGQLLVRGV-DGRERLLIADYMF 335
BLAST of EWM24649.1 vs. NCBI_GenBank
Match: gi|1072238256|gb|OEU22983.1| (class II aaRS and biotin synthetase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 111.309 bits (277), Expect = 1.247e-23 Identity = 64/177 (36.16%), Postives = 100/177 (56.50%), Query Frame = 0 Query: 143 QIQGRGTSGRAWMGGAGNMFLTVALPART-----LSALTYPITLLPLRMGTLIAREIVRILPHPEAQAR-----VQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLEGRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEK 309 Q G+GT+GR W+G GN+F+T+ +P + P+TLLPL++G L A I L ++Q++ V +KWPNDVL+D K+SG LIE + ++L+GIG+NVA AP + G D GR + + D ARD+ + +A+ W+ S E+ A+S++ W+ Sbjct: 207 QSNGKGTTGRKWLGTPGNVFVTIGIPVNVWMQEMMQNRNIPLTLLPLKIGDLTASLINSTLTKQQSQSKQQPPIVTVKWPNDVLVDGKKISGTLIE--SSDDWFLIGIGINVAYAPPISKTGTDYGRPSQ---------QEIDIARDMGVQLALDFHRWIYDSDEN-AESIVEGWKN 371
BLAST of EWM24649.1 vs. NCBI_GenBank
Match: gi|398020071|ref|XP_003863199.1| (biotin/lipoate protein ligase-like protein [Leishmania donovani] >gi|322501431|emb|CBZ36510.1| biotin/lipoate protein ligase-like protein [Leishmania donovani]) HSP 1 Score: 105.145 bits (261), Expect = 1.213e-22 Identity = 92/275 (33.45%), Postives = 133/275 (48.36%), Query Frame = 0 Query: 101 LHFVWVPEVRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGAGNMFLTVALP----ARTLSALTYPITLLPLRMGTLIAREIVRILPHPE-----------AQARVQLKWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLE-GRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEK-----LATWGKVYDLRDGGAVVPLALETDGRLRVRDLTSGATRLLTAEYL 354 +HF+ EV ST D RT+ A++ G A A+ A Q GRGT GR W GN+++T +P L P+ LPL G R ++ +L H + A V KWPND++ + K+ G LIE DG Y+++GIG+N+A AP + D GR A + + G T RDL+ AI + S E T +SVI ++K L + ++ D RD + ++L + G L+VR T GA L+AEYL Sbjct: 9 IHFL--EEVTSTMDVARTMRATA--------GGKAFAVVAAEQTAGRGTGGRTWTSPKGNLYMTFGVPQLGQPPCLKEELVPV--LPLICGLACRRAVLEVL-HLDRVSAKASVAADAAKAVSTKWPNDIIYNHKKIGGTLIENDG--DYFIIGIGMNIAVAPQM----TDAGREATMINAIAEDFGVKSCTPRDLANAIWCHFFD-ICTSPEWTRESVIESFDKVMDKSLKLYKRLPDGRDPEELTAVSLNSWGHLKVRH-TDGALEDLSAEYL 262
BLAST of EWM24649.1 vs. NCBI_GenBank
Match: gi|154342354|ref|XP_001567125.1| (biotin/lipoate protein ligase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] >gi|134064454|emb|CAM42548.1| biotin/lipoate protein ligase-like protein [Leishmania braziliensis MHOM/BR/75/M2904]) HSP 1 Score: 104.375 bits (259), Expect = 2.606e-22 Identity = 88/268 (32.84%), Postives = 124/268 (46.27%), Query Frame = 0 Query: 105 WVPEVRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYP--ITLLPLRMGTLIAREIVRILPHPEAQARVQL----------KWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLE-GRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEK-----LATWGKVYDLRDGGAVVPLALETDGRLRVRDLTSGATRLLTAEYL 354 ++ EV ST D RT+ ++ G AL A Q GRGT GR W GN+++T+ +P + + +LPL G R ++ +L EA A+ L KWPND++ K+ G LIE DG Y+++GIGVNVA P V D GR A + E G T +DL+ AI + S E T +SVI ++K L ++ RD + ++L + G LRVR G L AEYL Sbjct: 11 FLEEVGSTMDVARTMKMTA--------GGQPFALVAAVQTAGRGTCGRTWTSPKGNLYMTLGIPQQGQPPCFKEELVHVLPLICGLACRRAVLEVLHLDEASAKASLAAEASKAVSTKWPNDIIYKHKKIGGSLIEADG--DYFIIGIGVNVAVTPQV----TDAGREATMVNAIAEEFGVKSCTPQDLAKAIWHHFFD-ICTSPEQTRESVIESFDKVMDKSLKLHKRLPGGRDPEELTAVSLNSWGHLRVRH-ADGTMEDLAAEYL 262
BLAST of EWM24649.1 vs. NCBI_GenBank
Match: gi|731704140|ref|XP_010701487.1| (biotin/lipoate protein ligase-like protein [Leishmania panamensis] >gi|685206456|gb|AIO00687.1| biotin/lipoate protein ligase-like protein [Leishmania panamensis]) HSP 1 Score: 103.99 bits (258), Expect = 3.798e-22 Identity = 88/268 (32.84%), Postives = 124/268 (46.27%), Query Frame = 0 Query: 105 WVPEVRSTQDAMRTLLASSRRDSLSQKGVDALALSAGSQIQGRGTSGRAWMGGAGNMFLTVALPARTLSALTYP--ITLLPLRMGTLIAREIVRILPHPEAQARVQL----------KWPNDVLLDDGKVSGLLIEMDGTSSYYLVGIGVNVAQAPHVPSLGADRGRRAACLAQCGLE-GRGGDTARDLSIAIAVSITTWLGGSQEDTADSVIADWEK-----LATWGKVYDLRDGGAVVPLALETDGRLRVRDLTSGATRLLTAEYL 354 ++ EV ST D RT+ ++ G AL A Q GRGT GR W GN+++T+ +P + + +LPL G R ++ +L EA A+ L KWPND++ K+ G LIE DG Y+++GIGVNVA P V D GR A + E G T +DL+ AI + S E T +SVI ++K L ++ RD + ++L + G LRVR G L AEYL Sbjct: 11 FLEEVGSTMDVARTMKMTA--------GGQPFALVAAVQTAGRGTCGRTWTSPKGNLYMTLGVPQQGQPPCFKEELVPVLPLICGLACRRAVLEVLHLDEASAKASLAAEASKAVSTKWPNDIIYKHKKIGGSLIEADG--DYFIIGIGVNVAVTPQV----TDAGREATMVNAIAEEFGVKSCTPQDLAKAIWHHFFD-ICTSPEQTRESVIESFDKVMDKSLKLHKRLPGGRDPEELTAVSLNSWGHLRVRH-ADGTMEDLAAEYL 262 The following BLAST results are available for this feature:
BLAST of EWM24649.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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