EWM24746.1, cds5928 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24746.1 vs. NCBI_GenBank
Match: gi|585106291|gb|EWM24746.1| (cysteine protease atg4b-like protein [Nannochloropsis gaditana]) HSP 1 Score: 283.493 bits (724), Expect = 6.948e-97 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 MPTSLPSRPQYVPVSTCPLSTSSAHTVRPKEIVFELFLPLAPLSAARRASASSSSSPSSSVTGRWILGKRYDPEDLDGWTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLRCERGWRGVHVET 138
MPTSLPSRPQYVPVSTCPLSTSSAHTVRPKEIVFELFLPLAPLSAARRASASSSSSPSSSVTGRWILGKRYDPEDLDGWTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLRCERGWRGVHVET
Sbjct: 1 MPTSLPSRPQYVPVSTCPLSTSSAHTVRPKEIVFELFLPLAPLSAARRASASSSSSPSSSVTGRWILGKRYDPEDLDGWTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLRCERGWRGVHVET 138
BLAST of EWM24746.1 vs. NCBI_GenBank
Match: gi|301104974|ref|XP_002901571.1| (cysteine protease family C54, putative [Phytophthora infestans T30-4] >gi|262100575|gb|EEY58627.1| cysteine protease family C54, putative [Phytophthora infestans T30-4]) HSP 1 Score: 88.9669 bits (219), Expect = 2.995e-18 Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 0
Query: 56 SPSSSVTG-RWILGKRYDPE---DLDGWTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLR--CERGWR 132
+PS++++ W+LGKRYD D D + + F SI WFTYR +P M PY +T DAGWGCMLRSAQM++G+ L R R WR
Sbjct: 14 TPSAALSAPVWLLGKRYDDVAAVDFDAYKRSFESILWFTYRRDYPAMTPYEHTSDAGWGCMLRSAQMLLGQALQRRLLGRDWR 96
BLAST of EWM24746.1 vs. NCBI_GenBank
Match: gi|953497235|emb|CEG41544.1| (cysteine protease atg4b [Plasmopara halstedii]) HSP 1 Score: 83.5741 bits (205), Expect = 3.152e-16 Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = 0
Query: 65 WILGKRYDPEDLDG---WTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLRC--ERGWR 132
W+LG+RYD + ++F SI WFTYR FP M PY +T DAGWGCMLRSAQM++G+ L RC R WR
Sbjct: 24 WLLGQRYDDLAAADFDAYKRNFESILWFTYRRDFPVMTPYDFTSDAGWGCMLRSAQMILGQALQRCLLGRDWR 96
BLAST of EWM24746.1 vs. NCBI_GenBank
Match: gi|635368366|emb|CCI43467.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 81.2629 bits (199), Expect = 3.388e-15 Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 0
Query: 50 SASSSSSPSSSVTGRWILGKRYDPEDLD-------GWTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLR 126
SA S + S + + +LG RY P+D D + F SI W+TYR F TM PY +T DAGWGCMLRSAQM++ E R
Sbjct: 4 SALSDPNYSRNPSKLLLLGDRYSPQDFDTVDCLKHAYHNAFESILWYTYRRDFETMTPYEFTSDAGWGCMLRSAQMLLSEAFKR 87
BLAST of EWM24746.1 vs. NCBI_GenBank
Match: gi|325184648|emb|CCA19140.1| (cysteine protease family C54 putative [Albugo laibachii Nc14]) HSP 1 Score: 80.4925 bits (197), Expect = 5.288e-15 Identity = 36/76 (47.37%), Postives = 45/76 (59.21%), Query Frame = 0
Query: 58 SSSVTGRWILGKRYDPEDLD-------GWTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLR 126
S + + W+LG Y P+D D + F SI W+TYR F TM PY +T DAGWGCMLRSAQM++ E R
Sbjct: 68 SQNSSKLWLLGDCYSPQDFDNFDSMKDAYHDAFESILWYTYRRDFETMVPYDFTSDAGWGCMLRSAQMLLSEAFKR 143
BLAST of EWM24746.1 vs. NCBI_GenBank
Match: gi|970656849|gb|KUF94811.1| (hypothetical protein AM588_10010208 [Phytophthora nicotianae]) HSP 1 Score: 78.5666 bits (192), Expect = 1.371e-14 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0
Query: 56 SPSSSVTG-RWILGKRYDPEDLDG---WTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLR--CERGWR 132
+PS++++ W+LGKRYD + + F SI WFTYR +P M PY +T DAGWGCMLRSAQM++G+ L R R WR
Sbjct: 14 TPSAALSAPVWLLGKRYDDVAAADFDAYKRSFESILWFTYRRDYPAMTPYEHTSDAGWGCMLRSAQMLLGQALQRRILGREWR 96
BLAST of EWM24746.1 vs. NCBI_GenBank
Match: gi|970643362|gb|KUF84640.1| (Cysteine protease ATG4B [Phytophthora nicotianae]) HSP 1 Score: 78.9518 bits (193), Expect = 1.478e-14 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0
Query: 56 SPSSSVTG-RWILGKRYDPEDLDG---WTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLR--CERGWR 132
+PS++++ W+LGKRYD + + F SI WFTYR +P M PY +T DAGWGCMLRSAQM++G+ L R R WR
Sbjct: 14 TPSAALSAPVWLLGKRYDDVAAADFDAYKRSFESILWFTYRRDYPAMTPYEHTSDAGWGCMLRSAQMLLGQALQRRILGREWR 96
BLAST of EWM24746.1 vs. NCBI_GenBank
Match: gi|566021576|gb|ETI44487.1| (hypothetical protein F443_10814 [Phytophthora parasitica P1569] >gi|568047258|gb|ETM44342.1| hypothetical protein L914_10407 [Phytophthora parasitica]) HSP 1 Score: 78.9518 bits (193), Expect = 1.606e-14 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0
Query: 56 SPSSSVTG-RWILGKRYDPEDLDG---WTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLR--CERGWR 132
+PS++++ W+LGKRYD + + F SI WFTYR +P M PY +T DAGWGCMLRSAQM++G+ L R R WR
Sbjct: 14 TPSAALSAPVWLLGKRYDDVAAADFDAYKRSFESILWFTYRRDYPAMTPYEHTSDAGWGCMLRSAQMLLGQALQRRILGREWR 96
BLAST of EWM24746.1 vs. NCBI_GenBank
Match: gi|568016867|gb|ETL91044.1| (hypothetical protein L917_10368 [Phytophthora parasitica]) HSP 1 Score: 78.9518 bits (193), Expect = 1.647e-14 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0
Query: 56 SPSSSVTG-RWILGKRYDPEDLDG---WTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLR--CERGWR 132
+PS++++ W+LGKRYD + + F SI WFTYR +P M PY +T DAGWGCMLRSAQM++G+ L R R WR
Sbjct: 104 TPSAALSAPVWLLGKRYDDVAAADFDAYKRSFESILWFTYRRDYPAMTPYEHTSDAGWGCMLRSAQMLLGQALQRRILGREWR 186
BLAST of EWM24746.1 vs. NCBI_GenBank
Match: gi|675195753|ref|XP_008906761.1| (hypothetical protein PPTG_12477 [Phytophthora parasitica INRA-310] >gi|567958903|gb|ETK84486.1| hypothetical protein L915_10556 [Phytophthora parasitica] >gi|567987628|gb|ETL37926.1| hypothetical protein L916_10445 [Phytophthora parasitica] >gi|568093158|gb|ETN07957.1| hypothetical protein PPTG_12477 [Phytophthora parasitica INRA-310] >gi|570325195|gb|ETO73143.1| hypothetical protein F444_10890 [Phytophthora parasitica P1976] >gi|570949070|gb|ETP14327.1| hypothetical protein F441_10739 [Phytophthora parasitica CJ01A1] >gi|570982183|gb|ETP42374.1| hypothetical protein F442_10711 [Phytophthora parasitica P10297]) HSP 1 Score: 78.5666 bits (192), Expect = 1.772e-14 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0
Query: 56 SPSSSVTG-RWILGKRYDPEDLDG---WTQHFRSIPWFTYRHTFPTMAPYPYTDDAGWGCMLRSAQMMMGEGLLR--CERGWR 132
+PS++++ W+LGKRYD + + F SI WFTYR +P M PY +T DAGWGCMLRSAQM++G+ L R R WR
Sbjct: 14 TPSAALSAPVWLLGKRYDDVAAADFDAYKRSFESILWFTYRRDYPAMTPYEHTSDAGWGCMLRSAQMLLGQALQRRILGREWR 96 The following BLAST results are available for this feature:
BLAST of EWM24746.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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