EWM24759.1, cds5916 (CDS) Nannochloropsis gaditana

Overview
NameEWM24759.1
Unique Namecds5916
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:129144..129215 +
Alignment locationCM002467.1:129327..129461 +
Alignment locationCM002467.1:129580..129744 +
Alignment locationCM002467.1:129831..130055 +

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Properties
Property NameValue
Protein idEWM24759.1
ProductArrestin-like protein
Orig transcript idgnl|cribi|Naga_100292g2.1294.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:129144..129215 +
CM002467.1supercontigCM002467.1:129327..129461 +
CM002467.1supercontigCM002467.1:129580..129744 +
CM002467.1supercontigCM002467.1:129831..130055 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR014756Ig_E-set
IPR011021Arrestin-like_N
Homology
[Close]
BLAST of EWM24759.1 vs. NCBI_GenBank
Match: gi|585106318|gb|EWM24759.1| (Arrestin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 407.527 bits (1046), Expect = 5.267e-144
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 
Query:    1 MKMEKSSATTPLLPVGHGIQDGALIQVASTKNGISLWLLKDVFYPGETIHGKMKATFTSQMSVRAIKIKLTSRAKAFWWIFNGTQMVPICASLNLAPTIESSLQEMIPIRTNFVLEPGQQYEWPVELTLPQSLPSSFSFKKWTNVMREKTHIAYTLTLLVEVPGWMDYKLNYNLKVHSSPVSITPVSTWLRDQKVAIA 198
            MKMEKSSATTPLLPVGHGIQDGALIQVASTKNGISLWLLKDVFYPGETIHGKMKATFTSQMSVRAIKIKLTSRAKAFWWIFNGTQMVPICASLNLAPTIESSLQEMIPIRTNFVLEPGQQYEWPVELTLPQSLPSSFSFKKWTNVMREKTHIAYTLTLLVEVPGWMDYKLNYNLKVHSSPVSITPVSTWLRDQKVAIA
Sbjct:    1 MKMEKSSATTPLLPVGHGIQDGALIQVASTKNGISLWLLKDVFYPGETIHGKMKATFTSQMSVRAIKIKLTSRAKAFWWIFNGTQMVPICASLNLAPTIESSLQEMIPIRTNFVLEPGQQYEWPVELTLPQSLPSSFSFKKWTNVMREKTHIAYTLTLLVEVPGWMDYKLNYNLKVHSSPVSITPVSTWLRDQKVAIA 198
[Close]
BLAST of EWM24759.1 vs. NCBI_GenBank
Match: gi|585109041|gb|EWM26911.1| (Arrestin [Nannochloropsis gaditana])

HSP 1 Score: 168.703 bits (426), Expect = 1.565e-46
Identity = 87/168 (51.79%), Postives = 113/168 (67.26%), Query Frame = 0 
Query:   19 IQDGALIQVASTKNGISLWLLKDVFYPGETIHGKMKATFTSQMSVRAIKIKLTSRAKAFWWIFNGTQMVPICASLNLAPTIESSLQEMIPIRTNFVLEPGQQYEWPVELTLPQSLPSSFSFKKWTNVMREKTHIAYTLTLLVEVPGWMDYKLNYNLKVHSSPVSITPV 186
            + D AL +VA TK+GISLWL K  FYPG+T+ GKMKA  TS+ ++RA+K KL S A A W   +G       A+L LAPT+E  LQE  P  + FVLE  ++YEW V+  LP SLPSSF FKK T++ +  THIA+ LTL +++P W D KL Y L+VH +P +ITP 
Sbjct:  100 LDDFALRKVAFTKSGISLWLPKTDFYPGDTVIGKMKAKLTSKKTIRAVKAKLNSEAVASWTESSGEHSSTYYAALELAPTVELVLQEGTPSGSTFVLERRREYEWVVQFVLPPSLPSSFRFKKGTHIHKSDTHIAHMLTLSLDIPYWPDCKLEYFLRVHCTPEAITPA 267
The following BLAST results are available for this feature:
BLAST of EWM24759.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585106318|gb|EWM24759.1|5.267e-144100.00Arrestin-like protein [Nannochloropsis gaditana][more]
gi|585109041|gb|EWM26911.1|1.565e-4651.79Arrestin [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5931rna5931Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications