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Properties
| Property Name | Value |
|---|
| Product | sse2p |
| Orig transcript id | gnl|cribi|Naga_100234g5.1032.mrna |
| Orig protein id | gnl|cribi|Naga_100234g5.1032 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:1005774..1006898 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5858 ID=rna5858|Name=rna5858|organism=Nannochloropsis gaditana|type=mRNA|length=579bp
ATGGGAGGCTTGTTGTCGCGGGTCCTGGACACGCTGTCCGCGCTGGGAGG
GAAGCAGGAAAAGCGAATTCTGATGCTGGGCCTGGACGCGGCAGGAAAGA
CCACCATCCTCTACCGCCTCCAGCTGGGCGAGGACGTGCACTCCATCCCC
ACGATCGGGTTCAACGTGGAGACGGTCAACTACAAGAATATCTGCTTCAC
TATCTGGGACGTGGGGGGTCAAGACCGCTTGCGAAAGCTCTGGCGGCACT
ACTACAAGGACAATGACGCCCTTATCTTCGTCATCGATTCTGCCGACCGC
GACCGCTTCGATGAGGCCAAAACAGAGCTTCTCTCCCTCCTCTCCGAGCA
CCAACTCTCTCACAGCACCATCCTTGTCTTCGCCAACAAGGCCGACCTGC
CCACGGCCATTCCCGTCGTCGAGATCGCTCAGCTTCTCCAGCTTGACAGG
GCCGCCAAAGGACGGCATTGGTACATCCAACCCTCGTGTGCGACGACGGG
GGACGGGCTGGTGGAGGGCCTGGACTGGCTATCATGCAAGCTGAAGGAAG
CGGGTCCTCGCCCGCCGAGCTCCGCCTGA back to topprotein sequence of rna5858 >rna5858-protein ID=rna5858-protein|Name=rna5858|organism=Nannochloropsis gaditana|type=polypeptide|length=303bp
MSTNWKSHLGSTHTHRWQEFKTKAPRLKSEGGRMWLWSCATGRTAHCAFK
KQPQAPASSVSFLPLLLLTYLLLHADASLLTPISLGIDLGNHKSVVALAQ
GHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRR
LLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVR
VEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRS
QRALVVDAARIAGCASPACVTDGTALALGYGLLNVVRGGGGRGGEVGGGR
GGP back to topmRNA from alignment at CM002466.1:1005774..1006898+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5858 ID=rna5858|Name=rna5858|organism=Nannochloropsis gaditana|type=mRNA|length=1125bp|location=Sequence derived from alignment at CM002466.1:1005774..1006898+ (Nannochloropsis gaditana)
AGAAATACCCTCACAATGTCTACAAATTGGAAATCACATCTTGGAAGCAC
GCATACGCACAGGTGGCAGGAGTTTAAAACGAAAGCTCCCCGGTTGaaga
gcgaaggagggaggatgtggcTCTGGTCATGTGCAACAGGGAGGACCGCC
CATTGCGCTTTCAAAAAGCAGCCCCAAgcgcccgcgtcctccgtatcctt
ccttcctttacTCCTCCTCACTTACCTTCTGCTTCACGCGGATGCCAGCC
TGCTGACTCCCATCTCCCTGGGCATTGATCTCGGCAATCACAAAAGGTAG
CTTCACATTCCGTcttgtccctctctccattaTCATTTTTGCCTGAAACG
TTGGACTGCCAGTTGAACTCACTGGCATCGGGAAAGTGGATGGTATATCT
GGCTGCCATTGACAGGCATTCGGCATTGCTCTTCTTTCTCGTCTGACGCT
GATGGTGTCTTTAACCTCCTGTCGCCCCAATGCTCCCTCTACAGCGTGGT
TGCCCTGGCGCAGGGACACGGGATCGATGTCCACGTCAATGAGATGGGGC
GCCGCGAGACTCCCTCCGCGGTACTTCTGCGGGGTCGACGGCGGCATTTC
GGGGATTTGGCCCTGGCCGGTGCAGGCGCGGCGCCGGCAAGCGCAGTAAG
TGAGTTGCGCCGCCTCCTGGCTCTGGGTCTGCCCGTCGACGATGAGGACG
gtggccgaggagatgggggagaCGAGAGTAAGGACGTCGCAGAGGTCTTC
GGGGCAGCGGTGGTGGgcacgggcggggcggaggatcCTTGCCACGTGGG
GCCACGCGTGCGAGTCGAGCACGACGGCCGGGCCCTAACGCTGAGCGCGC
GGCAAGTGCTCGCCATGTTCGTTGCCCACCTCCGCAAAGGCGTGGAGGCC
GCCCACGGGGACGACAACGTCCTGAACACGGTCCTGAGCGTCCCTGCCTG
GTTTGGGAGGAGCCAGCGAGCCTTGGTCGTGGACGCAGCGAGGATCGCCG
GGTGTGCAAGCCCCGCCTGCGTGACGGACGGAACCGCGTTGGCCCTGGGG
TATGGCTTGCTGAACGtggtgaggggagggggagggaggggaggagaggt
ggggggaggcaggggaggccCCTAG back to topCoding sequence (CDS) from alignment at CM002466.1:1005774..1006898+ >rna5858 ID=rna5858|Name=rna5858|organism=Nannochloropsis gaditana|type=CDS|length=1824bp|location=Sequence derived from alignment at CM002466.1:1005774..1006898+ (Nannochloropsis gaditana)
ATGTCTACAAATTGGAAATCACATCTTGGAAGCACGCATACGCACAGGTG
GCAGGAGTTTAAAACGAAAGCTCCCCGGTTGaagagcgaaggagggagga
tgtggcTCTGGTCATGTGCAACAGGGAGGACCGCCCATTGCGCTTTCAAA
AAGCAGCCCCAAgcgcccgcgtcctccgtatccttccttcctttacTCCT
CCTCACTTACCTTCTGCTTCACGCGGATGCCAGCCTGCTGACTCCCATCT
CCCTGGGCATTGATCTCGGCAATCACAAAAGCGTGGTTGCCCTGGCGCAG
GGACACGGGATCGATGTCCACGTCAATGAGATGGGGCGCCGCGAGACTCC
CTCCGCGGTACTTCTGCGGGGTCGACGGCGGCATTTCGGGGATTTGGCCC
TGGCCGGTGCAGGCGCGGCGCCGGCAAGCGCAGTAAGTGAGTTGCGCCGC
CTCCTGGCTCTGGGTCTGCCCGTCGACGATGAGGACGgtggccgaggaga
tgggggagaCGAGAGTAAGGACGTCGCAGAGGTCTTCGGGGCAGCGGTGG
TGGgcacgggcggggcggaggatcCTTGCCACGTGGGGCCACGCGTGCGA
GTCGAGCACGACGGCCGGGCCCTAACGCTGAGCGCGCGGCAAGTGCTCGC
CATGTTCGTTGCCCACCTCCGCAAAGGCGTGGAGGCCGCCCACGGGGACG
ACAACGTCCTGAACACGGTCCTGAGCGTCCCTGCCTGGTTTGGGAGGAGC
CAGCGAGCCTTGGTCGTGGACGCAGCGAGGATCGCCGGGTGTGCAAGCCC
CGCCTGCGTGACGGACGGAACCGCGTTGGCCCTGGGGTATGGCTTGCTGA
ACGtggtgaggggagggggagggaggggaggagaggtggggggaggcagg
ggaggccCCTAGATGTCTACAAATTGGAAATCACATCTTGGAAGCACGCA
TACGCACAGGTGGCAGGAGTTTAAAACGAAAGCTCCCCGGTTGaagagcg
aaggagggaggatgtggcTCTGGTCATGTGCAACAGGGAGGACCGCCCAT
TGCGCTTTCAAAAAGCAGCCCCAAgcgcccgcgtcctccgtatccttcct
tcctttacTCCTCCTCACTTACCTTCTGCTTCACGCGGATGCCAGCCTGC
TGACTCCCATCTCCCTGGGCATTGATCTCGGCAATCACAAAAGCGTGGTT
GCCCTGGCGCAGGGACACGGGATCGATGTCCACGTCAATGAGATGGGGCG
CCGCGAGACTCCCTCCGCGGTACTTCTGCGGGGTCGACGGCGGCATTTCG
GGGATTTGGCCCTGGCCGGTGCAGGCGCGGCGCCGGCAAGCGCAGTAAGT
GAGTTGCGCCGCCTCCTGGCTCTGGGTCTGCCCGTCGACGATGAGGACGg
tggccgaggagatgggggagaCGAGAGTAAGGACGTCGCAGAGGTCTTCG
GGGCAGCGGTGGTGGgcacgggcggggcggaggatcCTTGCCACGTGGGG
CCACGCGTGCGAGTCGAGCACGACGGCCGGGCCCTAACGCTGAGCGCGCG
GCAAGTGCTCGCCATGTTCGTTGCCCACCTCCGCAAAGGCGTGGAGGCCG
CCCACGGGGACGACAACGTCCTGAACACGGTCCTGAGCGTCCCTGCCTGG
TTTGGGAGGAGCCAGCGAGCCTTGGTCGTGGACGCAGCGAGGATCGCCGG
GTGTGCAAGCCCCGCCTGCGTGACGGACGGAACCGCGTTGGCCCTGGGGT
ATGGCTTGCTGAACGtggtgaggggagggggagggaggggaggagaggtg
gggggaggcaggggaggccCCTAG back to top
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