EWM24828.1, cds5843 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24828.1 vs. NCBI_GenBank
Match: gi|585106424|gb|EWM24828.1| (sse2p [Nannochloropsis gaditana]) HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 Query: 1 MSTNWKSHLGSTHTHRWQEFKTKAPRLKSEGGRMWLWSCATGRTAHCAFKKQPQAPASSVSFLPLLLLTYLLLHADASLLTPISLGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLLNVVRGGGGRGGEVGGGRGGP 303 MSTNWKSHLGSTHTHRWQEFKTKAPRLKSEGGRMWLWSCATGRTAHCAFKKQPQAPASSVSFLPLLLLTYLLLHADASLLTPISLGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLLNVVRGGGGRGGEVGGGRGGP Sbjct: 1 MSTNWKSHLGSTHTHRWQEFKTKAPRLKSEGGRMWLWSCATGRTAHCAFKKQPQAPASSVSFLPLLLLTYLLLHADASLLTPISLGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLLNVVRGGGGRGGEVGGGRGGP 303
BLAST of EWM24828.1 vs. NCBI_GenBank
Match: gi|1159859782|gb|AQZ12974.1| (SSE2 (YBR169C) and SSE1 (YPL106C) [Zygosaccharomyces parabailii]) HSP 1 Score: 107.842 bits (268), Expect = 1.706e-22 Identity = 71/205 (34.63%), Postives = 104/205 (50.73%), Query Frame = 0 Query: 79 LLTPISLGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLL 283 + TP G+DLGNH SV+A+A+ GID+ VNE+ R TP+ V R R+ G+ + + V L+R++ LG DD+D A+ F + +V D VG RV+ + G+ SA Q+ MF ++ V + N+ + L+VPAW+ QR LV DAA+IAG V D TA A+ YG+ Sbjct: 1 MSTP--FGLDLGNHSSVLAVARNRGIDIVVNEVSNRSTPTVVGFGQRNRYLGETGKNKQTSNVKNTVENLKRIIGLGY--DDKDFPEE---------AKYFTSKLVKL----DDGKVGARVK--YAGKDTVFSAAQLAGMFFDKVKHTV-ISETKANISDVCLAVPAWYTEEQRYLVADAAKIAGLNPVRVVNDVTAAAVSYGVF 185
BLAST of EWM24828.1 vs. NCBI_GenBank
Match: gi|1206896719|emb|SJM82060.1| (probable Heat shock protein homolog SSE1 [Zygosaccharomyces bailii]) HSP 1 Score: 107.842 bits (268), Expect = 1.722e-22 Identity = 71/205 (34.63%), Postives = 104/205 (50.73%), Query Frame = 0 Query: 79 LLTPISLGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLL 283 + TP G+DLGNH SV+A+A+ GID+ VNE+ R TP+ V R R+ G+ + + V L+R++ LG DD+D A+ F + +V D VG RV+ + G+ SA Q+ MF ++ V + N+ + L+VPAW+ QR LV DAA+IAG V D TA A+ YG+ Sbjct: 1 MSTP--FGLDLGNHSSVLAVARNRGIDIVVNEVSNRSTPTVVGFGQRNRYLGETGKNKQTSNVKNTVENLKRIIGLGY--DDKDFPEE---------AKYFTSKLVKL----DDGKVGARVK--YAGKDTVFSAAQLAGMFFDKVKHTV-ISETKANISDVCLAVPAWYTEEQRYLVADAAKIAGLNPVRVVNDVTAAAVSYGVF 185
BLAST of EWM24828.1 vs. NCBI_GenBank
Match: gi|523422150|emb|CDF88411.1| (BN860_09648g1_1 [Zygosaccharomyces bailii CLIB 213]) HSP 1 Score: 107.842 bits (268), Expect = 1.877e-22 Identity = 71/205 (34.63%), Postives = 104/205 (50.73%), Query Frame = 0 Query: 79 LLTPISLGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLL 283 + TP G+DLGNH SV+A+A+ GID+ VNE+ R TP+ V R R+ G+ + + V L+R++ LG DD+D A+ F + +V D VG RV+ + G+ SA Q+ MF ++ V + N+ + L+VPAW+ QR LV DAA+IAG V D TA A+ YG+ Sbjct: 1 MSTP--FGLDLGNHSSVLAVARNRGIDIVVNEVSNRSTPTVVGFGQRNRYLGETGKNKQTSNVKNTVENLKRIIGLGY--DDKDFPEE---------AKYFTSKLVKL----DDGKVGARVK--YAGKDTVFSAAQLAGMFFDKVKHTV-ISETKANISDVCLAVPAWYTEEQRYLVADAAKIAGLNPVRVVNDVTAAAVSYGVF 185
BLAST of EWM24828.1 vs. NCBI_GenBank
Match: gi|578054030|emb|CDH10586.1| (probable Heat shock protein homolog SSE1 [Zygosaccharomyces bailii ISA1307] >gi|1159858853|gb|AQZ12045.1| SSE2 (YBR169C) and SSE1 (YPL106C) [Zygosaccharomyces parabailii]) HSP 1 Score: 107.842 bits (268), Expect = 2.042e-22 Identity = 71/205 (34.63%), Postives = 104/205 (50.73%), Query Frame = 0 Query: 79 LLTPISLGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLL 283 + TP G+DLGNH SV+A+A+ GID+ VNE+ R TP+ V R R+ G+ + + V L+R++ LG DD+D A+ F + +V D VG RV+ + G+ SA Q+ MF ++ V + N+ + L+VPAW+ QR LV DAA+IAG V D TA A+ YG+ Sbjct: 1 MSTP--FGLDLGNHSSVLAVARNRGIDIVVNEVSNRSTPTVVGFGQRNRYLGETGKNKQTSNVKNTVENLKRIIGLGY--DDKDFPEE---------AKYFTSKLVKL----DDGKVGARVK--YAGKDTVFSAAQLAGMFFDKVKHTV-ISETKANISDVCLAVPAWYTEEQRYLVADAAKIAGLNPVRVVNDVTAAAVSYGVF 185
BLAST of EWM24828.1 vs. NCBI_GenBank
Match: gi|578050138|emb|CDH14705.1| (probable Heat shock protein homolog SSE1 [Zygosaccharomyces bailii ISA1307]) HSP 1 Score: 107.457 bits (267), Expect = 2.713e-22 Identity = 71/205 (34.63%), Postives = 105/205 (51.22%), Query Frame = 0 Query: 79 LLTPISLGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLL 283 + TP G+DLGNH SV+A+A+ GID+ VNE+ R TP+ V R R+ G+ + + V L+R++ LG DD+D + A+ F + +V D VG RV+ + G+ SA Q+ MF ++ V + N+ + L+VPAW+ QR LV DAA+IAG V D TA A+ YG+ Sbjct: 1 MSTP--FGLDLGNHSSVLAVARNRGIDIVVNEVSNRSTPTVVGFGQRNRYLGETGKNKQTSNVKNTVENLKRIIGLGY--DDKD---------VPEEAKYFTSKLVKL----DDGKVGARVK--YAGKDTVFSAAQLAGMFFDKVKHTV-ISETKANISDVCLAVPAWYTEEQRYLVADAAKIAGLNPVRMVNDVTAAAVSYGVF 185
BLAST of EWM24828.1 vs. NCBI_GenBank
Match: gi|1091706642|emb|SCU91999.1| (LAMI_0E08284g1_1 [Lachancea mirantina]) HSP 1 Score: 105.531 bits (262), Expect = 1.141e-21 Identity = 68/199 (34.17%), Postives = 100/199 (50.25%), Query Frame = 0 Query: 85 LGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLL 283 G+DLGN+ SV+A+A+ GIDV VNE+ R TPS V + R G+ + + V L+R+ +GL DD D A+ F + +V D +G +VR G T SA Q+ AMF+ ++ V + N+ + ++VPAW+ QR L+ DAA+IAG V D TA A+ YG+ Sbjct: 5 FGLDLGNNNSVLAVARNRGIDVVVNEVSNRSTPSMVGFGQKNRFLGEAGKNKQTSNIKNTVDNLKRI--VGLNYDDADFATE---------AKYFSSKLVKL----DNGKIGAQVRFA--GEQQTFSATQLAAMFIDKVKNTV-ISETKANITDVAIAVPAWYTEEQRYLIADAAKIAGLNPVRIVNDVTAAAVSYGVF 185
BLAST of EWM24828.1 vs. NCBI_GenBank
Match: gi|1091669392|emb|SCU87219.1| (LAME_0D09230g1_1 [Lachancea meyersii CBS 8951]) HSP 1 Score: 105.145 bits (261), Expect = 1.294e-21 Identity = 71/205 (34.63%), Postives = 104/205 (50.73%), Query Frame = 0 Query: 79 LLTPISLGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLL 283 + TP G+DLGNH SV+A+A+ GID+ VNE+ R TPS V + R G+ A + + V L+R++ G+ DD D ESK F + +V + +G +VR+ G SA Q++AMF+ ++ V N+ + ++VPAW+ QR V DAARIAG V D TA A+ YG+ Sbjct: 1 MSTP--FGLDLGNHNSVLAVARNRGIDIVVNEVSNRATPSMVGFGQKNRFLGEAAKNKQTSNIKNTVESLKRII--GMNYDD-----VDFETESK----YFQSKLVKLEDGK----IGAQVRL--GGEQAVFSATQLVAMFINKVKNTVIEDTKGSNITDVAIAVPAWYTEEQRYAVADAARIAGLNPVRVVNDVTAAAVTYGVF 186
BLAST of EWM24828.1 vs. NCBI_GenBank
Match: gi|761760129|emb|CEP61990.1| (LALA0S04e05226g1_1 [Lachancea lanzarotensis]) HSP 1 Score: 104.375 bits (259), Expect = 2.804e-21 Identity = 72/200 (36.00%), Postives = 103/200 (51.50%), Query Frame = 0 Query: 85 LGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKG-VEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLL 283 G+DLGNH SV+A+A+ GID+ VNE+ R TPS V + R G+ A + + V L+R+ +GL DD D ESK F + +V D +G +VR+ G + SA Q++AMF+ ++ VE G + + ++VPAW+ QR V DAARIAG V D TA A+ YG+ Sbjct: 5 FGLDLGNHNSVLAVARNRGIDIVVNEVSNRSTPSMVGFGQKNRFLGEGAKNKQTSNIKNTVESLKRI--VGLNYDD-----VDFETESK----YFQSKLVKL----DDGKIGAQVRL--GGEQVVFSATQLVAMFINKVKSTVVEETKG--KITDVAIAVPAWYSEEQRYAVADAARIAGLNPVRVVNDVTAAAVTYGVF 185
BLAST of EWM24828.1 vs. NCBI_GenBank
Match: gi|365986975|ref|XP_003670319.1| (hypothetical protein NDAI_0E02590 [Naumovozyma dairenensis CBS 421] >gi|343769089|emb|CCD25076.1| hypothetical protein NDAI_0E02590 [Naumovozyma dairenensis CBS 421]) HSP 1 Score: 103.219 bits (256), Expect = 7.424e-21 Identity = 67/199 (33.67%), Postives = 100/199 (50.25%), Query Frame = 0 Query: 85 LGIDLGNHKSVVALAQGHGIDVHVNEMGRRETPSAVLLRGRRRHFGDLALAGAGAAPASAVSELRRLLALGLPVDDEDGGRGDGGDESKDVAEVFGAAVVGTGGAEDPCHVGPRVRVEHDGRALTLSARQVLAMFVAHLRKGVEAAHGDDNVLNTVLSVPAWFGRSQRALVVDAARIAGCASPACVTDGTALALGYGLL 283 G+DLGN+ SV+A+A+ GIDV VNE+ R TPS V + R+ G+ + + V L+R++ L D D ES E F + +V T D +G VR+ G T +A Q+ AMF+ ++ V+ N+ + ++VPAW+ QR + DAAR+AG V D TA A+ YG+ Sbjct: 5 FGLDLGNNNSVLAVARNRGIDVVVNEVSNRATPSLVGFGPKNRYLGETGKTKETSNVKNTVGNLKRIVGL-------DYAHPDFSTES----EYFTSKLVKT----DDEKIGAEVRLA--GEKHTFNATQLAAMFIGKVKNTVQ-QETKANINDVCVAVPAWYTEEQRYTIADAARVAGLNPVRIVNDVTAAAVSYGVF 185 The following BLAST results are available for this feature:
BLAST of EWM24828.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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