EWM24877.1, cds5796 (CDS) Nannochloropsis gaditana

Overview
NameEWM24877.1
Unique Namecds5796
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:898323..898637 +

Link to JBrowse

Properties
Property NameValue
Start range898323
Start range.
Protein idEWM24877.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100432g1.5740.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:898323..898637 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24877.1 vs. NCBI_GenBank
Match: gi|585106499|gb|EWM24877.1| (hypothetical protein Naga_100432g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 204.527 bits (519), Expect = 1.021e-66
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 
Query:    1 TGAAGDRTREWRSSIGASGLMGNSAPPGGWAVGREGGREGGREGGECVMPCFDLKGEILCADRSFLLPFRISLPPSLPPSLLPSKAPGATPPRCRLSMSHSRTW 104
            TGAAGDRTREWRSSIGASGLMGNSAPPGGWAVGREGGREGGREGGECVMPCFDLKGEILCADRSFLLPFRISLPPSLPPSLLPSKAPGATPPRCRLSMSHSRTW
Sbjct:    1 TGAAGDRTREWRSSIGASGLMGNSAPPGGWAVGREGGREGGREGGECVMPCFDLKGEILCADRSFLLPFRISLPPSLPPSLLPSKAPGATPPRCRLSMSHSRTW 104
The following BLAST results are available for this feature:
BLAST of EWM24877.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106499|gb|EWM24877.1|1.021e-66100.00hypothetical protein Naga_100432g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5811rna5811Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications