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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100265g6.8300.mrna |
| Orig protein id | gnl|cribi|Naga_100265g6.8300 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:885997..888330 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5806 ID=rna5806|Name=rna5806|organism=Nannochloropsis gaditana|type=mRNA|length=525bp
ATGTTCAACGAAAGCATCGTGGCCAGCAGTCGGGCAACGAGAAATCAGGC
TGCAGAATTTCAGGCGTACGTGACAGATATGATACCCACCGCTTTTCGGT
CCATTTTGAGGATGTTTTGTCGTGCGCAGACTGCCTTGAGGATCATGCAC
CGGGTGTACGCCTCCATAGTATCTAGGCAAACAAGTTTCACTCATTGTCT
TCGGTCCACCGTGAACGCAGGCACAATGGGTAACATTTTTCCAACTACGG
CAAGTAACGGTTACATTGCACCTGGCCACACAGAGATAAGTACGCCTAAT
GCCGTGAGATGGCGGCCGCATCACTTCGATAGCCGATGTGAGAAACTTTT
TTGTGACGGTTTTTGCCATGAAAACAAAAAGTTTTACACTGGTAGCTCTG
CTCATCCGAACCGTACATCGGAATGGGTTTGGTCAAGGGGGGAGTTGGGT
GCAACAAAGAACAAGGGGCCGGATTACGTCGAAGCGGAGAAGAAAATGAA
ACATACGTTGGACGCGAGCTCGTAA back to topprotein sequence of rna5806 >rna5806-protein ID=rna5806-protein|Name=rna5806|organism=Nannochloropsis gaditana|type=polypeptide|length=505bp
MSFSFGGSSSGTGTNDPNAGAPKPGAFSFSQPGVPTPASGFNVSNAGTAP
ATPGFGGFGSTVKTPDTSNRASTAFGSTSTGDANIPSKPASAGLFGGGST
TFSSPTPSISGAVAPATAPVGGIVANPFSMAPAPTPSSGFGALTTPSPFA
TTSTPAPAPTSNAVFGGSTHATGTPASNANNFGVGASTTSASTGGGFQFG
NQAAPAPAPSTTFSTPASSTSGFGSGSMFGTRHATGALPAFGASTGTTQA
SDQAPPSAAAPRASTPAPPPASSSLFGSAPSATTSLPGSASLFGSTVWGL
GKSVATDPAVFEREFGAYKLSELIKLFQGGVEDDLEVCEVQNEAVREGDE
RTATAQEVTRVLDAAVADLSAAWGELDAGLSYVEGKQAALETDMAGLEKS
LAVLLEGDVALDGADLERMDLYDLLQGMDAELNMLLRRVTREAGRVGGIY
ERHISPPDAENPMGIFLRLTNDHQHALEWLQRTARQVEDAAMQCEMEMTA
TGTQK back to topmRNA from alignment at CM002466.1:885997..888330- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5806 ID=rna5806|Name=rna5806|organism=Nannochloropsis gaditana|type=mRNA|length=2334bp|location=Sequence derived from alignment at CM002466.1:885997..888330- (Nannochloropsis gaditana)
ATGTCTTTTTCATTTGGTGGAAGCAGCTCGGGGACAGGGACCAACGACCC
AAATGCTGGGGCACCTAAACCAGGTGCATTTAGTTTCTCCCAACCTGGCG
TTCCGACCCCTGCCTCTGGATTTAATGTGTCCAATGCAGGGACAGCGCCC
GCAACGCCTGGATTTGGAGGGTTTGGCAGCACGGTAAAGACCCCGGATAC
AAGCAATCGTGCGTCTACCGCGTTCGGTTCGACCTCCACGGGCGATGCCA
ACATCCCCAGCAAACCAGCATCCGCCGGCCTCTTTGGAGGAGGTAGCACG
ACTTTCAGCTCTCCTACCCCTTCCATCTCCGGTGCCGTTGCGCCTGCTAC
GGCCCCGGTTGGCGGGATTGTCGCAAACCCTTTCTCTATGGCTCCTGCAC
CCACACCGTCAAGCGGATTCGGCGCCCTTACAACCCCAAGTCCCTTCGCC
ACCACCTCGACCCCTGCACCTGCCCCCACCAGCAACGCTGTATTCGGGGG
CTCCACGCATGCCACGGGCACACCGGCCTCGAATGCCAACAACTTCGGCG
TGGGTGCCTCGACCACCTCGGCGTCCACAGGTGGAGGGTTTCAATTTGGA
AACCAAGCTGCCCCGGCACCGGCCCCGAGCACCACCTTCTCAACCCCTGC
GTCAAGCACGTCTGGATTCGGCTCAGGCTCCATGTTTGGGACTCGCCATG
CAACAGGCGCCCTACCCGCTTTCGGTGCATCCACTGGCACGACCCAGGCG
TCCGACCAAGCCCCGCCGTCTGCTGCAGCACCGCGAGCATCAACACCCGC
CCCCCCCCCTGCAAGCTCTTCCCTCTTTGGAAGCGCTCCTTCTGCAACGA
CCTCCCTACCCGGCAGCGCCTCGCTCTTCGGCAGCACAGGTACTACGCCA
GCCCCTTCCCTTCCCACGAGCTCCTTTTCATTCGGCGGGGGAGGGACCTC
GGGAACCAAACCACCTGCCCAGCAGACTCCCTCCCAGCCCACTTTGAACC
CCCCTGACTCGAACGTCCCTGCGCCTGCAGCCACTTTGACTTCCTCCCAA
GCGATTGCCCCGCCAGTCCCTTCTAGTTCCGCCGCCGCCCCTCCTTCCTT
TGCCTCCACCGCCTTCAGTTTCGGAAACCCCCCATCTAAACCGGGGCCCG
CCGGAGACCAAGCCGCAGGGTCTGCCAAGGAAACTGCCCCGACTCCTTCC
ACGCAGACCTCGACCACCTTTCCATCGCCCGTTCCCACACCCTCTGCCCC
CTCCCCAGCGACTGTACCCGAAACCCCCAAACCTACTTTTTCCTTCGCCT
CGACCGTGCCCGCCCCTCCAAAGTCTGCCCCCGCCCCTGCCCCCTTTTCC
TTGTCATCCGCTGCTCCCTCCTCCACGGCCCCCGCCCCCGCGCCCGCCTC
TTCGGATGTCGCCGCCACAGACGCCCCTCCTTCCTCTACCGTACCCAGTG
GCTCTAAACCCTTTTCCTTCGCCTCTGGGAGCTCCATCTTTTCTCCTGCT
TTGGCCCCTGCTCCTGGTCCTCCCGCCTCTGCGCCTGCCGTGCCCGGCCC
GGCCGCCCCCTACAGCCTCGCCCCTCCCTCCGAGACGGCGTCCGGCTCAA
GCACCACCACCCGCATTGCTGGTCCCACGCTCCCTCCCTCTACCCTTACT
ACCATCACTGCCGCCTCGACAAAGCCGCCCGCCCTCCCCGGGGACAAAAC
GGAAGTGTGGGGCTTGGGGAAAAGCGTGGCGACGGACCCGGCGGTTTTTG
AACGTGAGTTTGGGGCGTATAAATTGAGTGAGCTGATCAAGCTCTTCCAA
GGTGGGGTGGAGGACGATTTGGAGGTGTGCGAGGTGCAAAACGAAGCGGT
TCGGGAGGGGGACGAAAGGACTGCGACCGCCCAAGAGGTGACGCGGGTCC
TGGACGCGGCGGTGGCGGATTTGAGCGCTGCCTGGGGGGAATTGGACGCC
GGCCTCAGCTATGTGGAAGGAAAACAGGCGGCGTTGGAGACGGACATGGC
GGGATTGGAGAAGTCCCTGGCAGTCCTTCTGGAGGGAGACGTGGCTTTGG
ACGGCGCGGACCTGGAGCGGATGGATTTGTATGATTTGCTGCAAGGGATG
GACGCGGAGCTGAACATGTTGCTGCGACGTGTCACTCGGGAGGCGGGGCG
GGTGGGAGGGATTTATGAGAGGCACATTTCCCCGCCGGACGCCGAAAACC
CCATGGGAATTTTCTTGCGATTGACCAACGACCACCAACATGCCTTGGAA
TGGCTGCAGCGGACCGCGCGACAAGTGGAGGACGCGGCGATGCAGTGCGA
GATGGAAATGACAGCGACAGGCACACAAAAGTAA back to topCoding sequence (CDS) from alignment at CM002466.1:885997..888330- >rna5806 ID=rna5806|Name=rna5806|organism=Nannochloropsis gaditana|type=CDS|length=3036bp|location=Sequence derived from alignment at CM002466.1:885997..888330- (Nannochloropsis gaditana)
TGTGGGGCTTGGGGAAAAGCGTGGCGACGGACCCGGCGGTTTTTGAACGT
GAGTTTGGGGCGTATAAATTGAGTGAGCTGATCAAGCTCTTCCAAGGTGG
GGTGGAGGACGATTTGGAGGTGTGCGAGGTGCAAAACGAAGCGGTTCGGG
AGGGGGACGAAAGGACTGCGACCGCCCAAGAGGTGACGCGGGTCCTGGAC
GCGGCGGTGGCGGATTTGAGCGCTGCCTGGGGGGAATTGGACGCCGGCCT
CAGCTATGTGGAAGGAAAACAGGCGGCGTTGGAGACGGACATGGCGGGAT
TGGAGAAGTCCCTGGCAGTCCTTCTGGAGGGAGACGTGGCTTTGGACGGC
GCGGACCTGGAGCGGATGGATTTGTATGATTTGCTGCAAGGGATGGACGC
GGAGCTGAACATGTTGCTGCGACGTGTCACTCGGGAGGCGGGGCGGGTGG
GAGGGATTTATGAGAGGCACATTTCCCCGCCGGACGCCGAAAACCCCATG
GGAATTTTCTTGCGATTGACCAACGACCACCAACATGCCTTGGAATGGCT
GCAGCGGACCGCGCGACAAGTGGAGGACGCGGCGATGCAGTGCGAGATGG
AAATGACAGCGACAGGCACACAAAAGTAAATGTCTTTTTCATTTGGTGGA
AGCAGCTCGGGGACAGGGACCAACGACCCAAATGCTGGGGCACCTAAACC
AGGTGCATTTAGTTTCTCCCAACCTGGCGTTCCGACCCCTGCCTCTGGAT
TTAATGTGTCCAATGCAGGGACAGCGCCCGCAACGCCTGGATTTGGAGGG
TTTGGCAGCACGGTAAAGACCCCGGATACAAGCAATCGTGCGTCTACCGC
GTTCGGTTCGACCTCCACGGGCGATGCCAACATCCCCAGCAAACCAGCAT
CCGCCGGCCTCTTTGGAGGAGGTAGCACGACTTTCAGCTCTCCTACCCCT
TCCATCTCCGGTGCCGTTGCGCCTGCTACGGCCCCGGTTGGCGGGATTGT
CGCAAACCCTTTCTCTATGGCTCCTGCACCCACACCGTCAAGCGGATTCG
GCGCCCTTACAACCCCAAGTCCCTTCGCCACCACCTCGACCCCTGCACCT
GCCCCCACCAGCAACGCTGTATTCGGGGGCTCCACGCATGCCACGGGCAC
ACCGGCCTCGAATGCCAACAACTTCGGCGTGGGTGCCTCGACCACCTCGG
CGTCCACAGGTGGAGGGTTTCAATTTGGAAACCAAGCTGCCCCGGCACCG
GCCCCGAGCACCACCTTCTCAACCCCTGCGTCAAGCACGTCTGGATTCGG
CTCAGGCTCCATGTTTGGGACTCGCCATGCAACAGGCGCCCTACCCGCTT
TCGGTGCATCCACTGGCACGACCCAGGCGTCCGACCAAGCCCCGCCGTCT
GCTGCAGCACCGCGAGCATCAACACCCGCCCCCCCCCCTGCAAGCTCTTC
CCTCTTTGGAAGCGCTCCTTCTGCAACGACCTCCCTACCCGGCAGCGCCT
CGCTCTTCGGCAGCACAGTGTGGGGCTTGGGGAAAAGCGTGGCGACGGAC
CCGGCGGTTTTTGAACGTGAGTTTGGGGCGTATAAATTGAGTGAGCTGAT
CAAGCTCTTCCAAGGTGGGGTGGAGGACGATTTGGAGGTGTGCGAGGTGC
AAAACGAAGCGGTTCGGGAGGGGGACGAAAGGACTGCGACCGCCCAAGAG
GTGACGCGGGTCCTGGACGCGGCGGTGGCGGATTTGAGCGCTGCCTGGGG
GGAATTGGACGCCGGCCTCAGCTATGTGGAAGGAAAACAGGCGGCGTTGG
AGACGGACATGGCGGGATTGGAGAAGTCCCTGGCAGTCCTTCTGGAGGGA
GACGTGGCTTTGGACGGCGCGGACCTGGAGCGGATGGATTTGTATGATTT
GCTGCAAGGGATGGACGCGGAGCTGAACATGTTGCTGCGACGTGTCACTC
GGGAGGCGGGGCGGGTGGGAGGGATTTATGAGAGGCACATTTCCCCGCCG
GACGCCGAAAACCCCATGGGAATTTTCTTGCGATTGACCAACGACCACCA
ACATGCCTTGGAATGGCTGCAGCGGACCGCGCGACAAGTGGAGGACGCGG
CGATGCAGTGCGAGATGGAAATGACAGCGACAGGCACACAAAAGTAAATG
TCTTTTTCATTTGGTGGAAGCAGCTCGGGGACAGGGACCAACGACCCAAA
TGCTGGGGCACCTAAACCAGGTGCATTTAGTTTCTCCCAACCTGGCGTTC
CGACCCCTGCCTCTGGATTTAATGTGTCCAATGCAGGGACAGCGCCCGCA
ACGCCTGGATTTGGAGGGTTTGGCAGCACGGTAAAGACCCCGGATACAAG
CAATCGTGCGTCTACCGCGTTCGGTTCGACCTCCACGGGCGATGCCAACA
TCCCCAGCAAACCAGCATCCGCCGGCCTCTTTGGAGGAGGTAGCACGACT
TTCAGCTCTCCTACCCCTTCCATCTCCGGTGCCGTTGCGCCTGCTACGGC
CCCGGTTGGCGGGATTGTCGCAAACCCTTTCTCTATGGCTCCTGCACCCA
CACCGTCAAGCGGATTCGGCGCCCTTACAACCCCAAGTCCCTTCGCCACC
ACCTCGACCCCTGCACCTGCCCCCACCAGCAACGCTGTATTCGGGGGCTC
CACGCATGCCACGGGCACACCGGCCTCGAATGCCAACAACTTCGGCGTGG
GTGCCTCGACCACCTCGGCGTCCACAGGTGGAGGGTTTCAATTTGGAAAC
CAAGCTGCCCCGGCACCGGCCCCGAGCACCACCTTCTCAACCCCTGCGTC
AAGCACGTCTGGATTCGGCTCAGGCTCCATGTTTGGGACTCGCCATGCAA
CAGGCGCCCTACCCGCTTTCGGTGCATCCACTGGCACGACCCAGGCGTCC
GACCAAGCCCCGCCGTCTGCTGCAGCACCGCGAGCATCAACACCCGCCCC
CCCCCCTGCAAGCTCTTCCCTCTTTGGAAGCGCTCCTTCTGCAACGACCT
CCCTACCCGGCAGCGCCTCGCTCTTCGGCAGCACAG back to top
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