EWM24918.1, cds5761 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24918.1 vs. NCBI_GenBank
Match: gi|585106546|gb|EWM24918.1| (ankyrin repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 534.258 bits (1375), Expect = 0.000e+0 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 Query: 1 MQDKEHYPPKILQDPALKALTQQNPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPDGWRKPRPHEDRSARAQYIKAKYVWKGFTCIVSDGVGSAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNSLMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGHHALTVQYLLKF 260 MQDKEHYPPKILQDPALKALTQQNPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPDGWRKPRPHEDRSARAQYIKAKYVWKGFTCIVSDGVGSAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNSLMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGHHALTVQYLLKF Sbjct: 1 MQDKEHYPPKILQDPALKALTQQNPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPDGWRKPRPHEDRSARAQYIKAKYVWKGFTCIVSDGVGSAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNSLMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGHHALTVQYLLKF 260
BLAST of EWM24918.1 vs. NCBI_GenBank
Match: gi|569414493|gb|ETO25943.1| (hypothetical protein RFI_11195 [Reticulomyxa filosa]) HSP 1 Score: 153.295 bits (386), Expect = 9.301e-39 Identity = 89/238 (37.39%), Postives = 131/238 (55.04%), Query Frame = 0 Query: 13 QDPALKALTQQ-NPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPDGWRKPRPHEDRSARAQYIKAKYVWKGFTCIVSDGVGSAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNSLMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGH 249 Q ALK Q N CADC P+WVS+N+GV+VC+ CSGVHRSLG HVSK+RS+ LDD+ L+L+ +LGN++VN++ E+ P + K + + R ++IK KY++K F + + + D+L L ++ NL LEA+ GA+VD ++ GRTPLH+A +G + AV L+QNGA+ ++DRD TA +LA + H Sbjct: 504 QKRALKKEIQDANLHCADCGKKEPEWVSINMGVLVCISCSGVHRSLGTHVSKVRSIVLDDIPLSTLSLLHQLGNSKVNELLEHTIPSDYVKCDQNSEGHEREKFIKGKYMFKLF---------------------------INPSNRKSHDELNGQLF--QSAKTENLLSILEAICYGANVDCVSSDPSQNGRTPLHVATLEGKGL--AVELLLQNGASHLIKDRDGKTARELAMEMH 710
BLAST of EWM24918.1 vs. NCBI_GenBank
Match: gi|1083278684|ref|XP_018587646.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X4 [Scleropages formosus]) HSP 1 Score: 150.214 bits (378), Expect = 3.827e-38 Identity = 93/237 (39.24%), Postives = 129/237 (54.43%), Query Frame = 0 Query: 24 NPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPDGWR-KPRPHEDRSARAQYIKAKYVWKGFTCIVSDGVGSAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNSLMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGHHALTVQYLLK 259 N C DC A P W SLNLG+ +C++CSG+HRSLGVH+SK+RSL LD DP L L+ LGN +N +YE Q + R KP P R + +I+ KYV K F V + + + G+ G + A++++ L +A + +L AL QGA+V+W+ ++GRTPL +AA G ++ A FL+QNGANV RD+ AL A H V LLK Sbjct: 291 NQHCCDCGAEEPRWASLNLGITMCIECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCVLGNDVINTIYEAQVSEKGRLKPSPDSQRQEKQTWIREKYVEKKF---VKEAITTCLGD--------------GDSQGAQEERERVGRRLYQAAQQGDLVSMATALAQGAEVNWSNA--EDEGRTPL-IAATCGGSLL-ACHFLLQNGANVNQRDQRGQGALHAAATRGHTGQVCLLLK 506
BLAST of EWM24918.1 vs. NCBI_GenBank
Match: gi|1083278682|ref|XP_018587645.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X3 [Scleropages formosus]) HSP 1 Score: 150.599 bits (379), Expect = 4.966e-38 Identity = 93/237 (39.24%), Postives = 129/237 (54.43%), Query Frame = 0 Query: 24 NPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPDGWR-KPRPHEDRSARAQYIKAKYVWKGFTCIVSDGVGSAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNSLMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGHHALTVQYLLK 259 N C DC A P W SLNLG+ +C++CSG+HRSLGVH+SK+RSL LD DP L L+ LGN +N +YE Q + R KP P R + +I+ KYV K F V + + + G+ G + A++++ L +A + +L AL QGA+V+W+ ++GRTPL +AA G ++ A FL+QNGANV RD+ AL A H V LLK Sbjct: 404 NQHCCDCGAEEPRWASLNLGITMCIECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCVLGNDVINTIYEAQVSEKGRLKPSPDSQRQEKQTWIREKYVEKKF---VKEAITTCLGD--------------GDSQGAQEERERVGRRLYQAAQQGDLVSMATALAQGAEVNWSNA--EDEGRTPL-IAATCGGSLL-ACHFLLQNGANVNQRDQRGQGALHAAATRGHTGQVCLLLK 619
BLAST of EWM24918.1 vs. NCBI_GenBank
Match: gi|1083278680|ref|XP_018587644.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like isoform X2 [Scleropages formosus]) HSP 1 Score: 150.599 bits (379), Expect = 7.051e-38 Identity = 93/237 (39.24%), Postives = 129/237 (54.43%), Query Frame = 0 Query: 24 NPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPDGWR-KPRPHEDRSARAQYIKAKYVWKGFTCIVSDGVGSAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNSLMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGHHALTVQYLLK 259 N C DC A P W SLNLG+ +C++CSG+HRSLGVH+SK+RSL LD DP L L+ LGN +N +YE Q + R KP P R + +I+ KYV K F V + + + G+ G + A++++ L +A + +L AL QGA+V+W+ ++GRTPL +AA G ++ A FL+QNGANV RD+ AL A H V LLK Sbjct: 398 NQHCCDCGAEEPRWASLNLGITMCIECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCVLGNDVINTIYEAQVSEKGRLKPSPDSQRQEKQTWIREKYVEKKF---VKEAITTCLGD--------------GDSQGAQEERERVGRRLYQAAQQGDLVSMATALAQGAEVNWSNA--EDEGRTPL-IAATCGGSLL-ACHFLLQNGANVNQRDQRGQGALHAAATRGHTGQVCLLLK 613
BLAST of EWM24918.1 vs. NCBI_GenBank
Match: gi|1083278674|ref|XP_018587640.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X1 [Scleropages formosus] >gi|1083278676|ref|XP_018587641.1| PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X1 [Scleropages formosus] >gi|1083278678|ref|XP_018587642.1| PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X1 [Scleropages formosus]) HSP 1 Score: 150.214 bits (378), Expect = 8.772e-38 Identity = 93/237 (39.24%), Postives = 129/237 (54.43%), Query Frame = 0 Query: 24 NPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPDGWR-KPRPHEDRSARAQYIKAKYVWKGFTCIVSDGVGSAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNSLMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGHHALTVQYLLK 259 N C DC A P W SLNLG+ +C++CSG+HRSLGVH+SK+RSL LD DP L L+ LGN +N +YE Q + R KP P R + +I+ KYV K F V + + + G+ G + A++++ L +A + +L AL QGA+V+W+ ++GRTPL +AA G ++ A FL+QNGANV RD+ AL A H V LLK Sbjct: 404 NQHCCDCGAEEPRWASLNLGITMCIECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCVLGNDVINTIYEAQVSEKGRLKPSPDSQRQEKQTWIREKYVEKKF---VKEAITTCLGD--------------GDSQGAQEERERVGRRLYQAAQQGDLVSMATALAQGAEVNWSNA--EDEGRTPL-IAATCGGSLL-ACHFLLQNGANVNQRDQRGQGALHAAATRGHTGQVCLLLK 619
BLAST of EWM24918.1 vs. NCBI_GenBank
Match: gi|1049281317|ref|XP_017536995.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like [Pygocentrus nattereri]) HSP 1 Score: 149.443 bits (376), Expect = 1.982e-37 Identity = 96/236 (40.68%), Postives = 120/236 (50.85%), Query Frame = 0 Query: 24 NPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPDGWRKPRPHEDRSARAQYIKAKYVWKGFTCIVSDGVGSAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNSLMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGHHALTVQYLLK 259 N C DC P W S+NLG+ VC++CSG+HRSLGVH+SK+RSL LD DP L L+ LGN +N +YE DG KP P R + +I+ KYV + F V SA EN + + V K L +AV++ L AL QGADV+W+ E GRT L AA G + A FL+QNGANV RD+ AL A H V LLK Sbjct: 397 NHRCCDCGEAEPRWASVNLGITVCIECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCVLGNDVINSIYECSPSDGLTKPDPQSSRQVKEVWIRRKYVERSF---VKKDCESADAEN----------LKMRVGQK-----------LYQAVLDGELVTMATALAQGADVNWSN--PEEAGRTALIGAAIGGS--LLACEFLLQNGANVNYRDQHGQAALHAAATRGHTGQVCLLLK 604
BLAST of EWM24918.1 vs. NCBI_GenBank
Match: gi|569365577|gb|ETO09355.1| (hypothetical protein RFI_28022, partial [Reticulomyxa filosa]) HSP 1 Score: 145.591 bits (366), Expect = 2.547e-37 Identity = 87/235 (37.02%), Postives = 123/235 (52.34%), Query Frame = 0 Query: 24 NPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPDGWRKPRPHEDRSARAQYIK-------------AKYVWKGFTCIVSDGVGSAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNSLMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLA 245 NP+CADC P+WVS+N+GV+VC+ CSGVHRSLG HVSKIRS++LDD+ L L+ RLGN RVNK+ E+ P + K S A Y+ KY++K F + A + ++L N +L+++ +L LEA+ QGA+VD ++ RTPLH+A Q V A+ L+QNGA+ +D+D TA +LA Sbjct: 194 NPICADCGKKEPEWVSINMGVMVCISCSGVHRSLGTHVSKIRSISLDDIHMSTLTLLHRLGNERVNKILEHTIPSDYEKC-----NSNSAGYVPKKFCIQKKKKKSYGKYMFKLF---------------------------INPASQKSHEELNN--LLLESTKSEDLLPMLEAICQGANVDCVSPDPSQNNRTPLHIATLQNKPV--ALELLLQNGASQSAKDKDGKTARELA 392
BLAST of EWM24918.1 vs. NCBI_GenBank
Match: gi|700364450|ref|XP_009926862.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X5 [Haliaeetus albicilla]) HSP 1 Score: 148.288 bits (373), Expect = 4.278e-37 Identity = 97/259 (37.45%), Postives = 129/259 (49.81%), Query Frame = 0 Query: 24 NPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPD-GWRKPRPHEDRSARAQYIKAKYVWKGF-------TCIVSDGVG----SAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNS-----------LMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGHHALTVQYLLK 259 N C DC P W S+NLG+ +C++CSG+HRSLGVH SK+RSL LD +P L L+ LGN +N++YE + G +KP+P R + YI+AKYV + F ++ G S + + G + A + G A + DK +S L L +A E NL EAL GA+V+W EN+ TPL A R G V FL+QNGANV +RD L AT H V LK Sbjct: 374 NAACCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDSWEPELLKLMCELGNGVINRIYEAKLEKVGVKKPQPGSQRQEKEAYIRAKYVERKFVERQPVSVSLLESGTKVLPQSQEEKRHSGPEKTLLAGEQGAASLKEGDKQESSVFCDSKQSSPGLQLYRAAFEKNLPDMAEALAHGAEVNWVNVEENKA--TPLIQAVRGGSLVT--CEFLLQNGANVNIRDMKGRGPLHHATVLGHTGQVCLFLK 628
BLAST of EWM24918.1 vs. NCBI_GenBank
Match: gi|729740871|ref|XP_010566685.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X5 [Haliaeetus leucocephalus]) HSP 1 Score: 147.902 bits (372), Expect = 8.452e-37 Identity = 97/259 (37.45%), Postives = 129/259 (49.81%), Query Frame = 0 Query: 24 NPLCADCEAPHPDWVSLNLGVVVCLQCSGVHRSLGVHVSKIRSLALDDVDPVDLALVSRLGNTRVNKVYEYQFPD-GWRKPRPHEDRSARAQYIKAKYVWKGF-------TCIVSDGVG----SAAGENNGGRSEIAEAIDLGVAGKAKDDKLGNS-----------LMLVKAVMENNLEGALEALVQGADVDWTGGTENEKGRTPLHLAARQGDEVVEAVAFLVQNGANVGLRDRDDLTALDLATQGHHALTVQYLLK 259 N C DC P W S+NLG+ +C++CSG+HRSLGVH SK+RSL LD +P L L+ LGN +N++YE + G +KP+P R + YI+AKYV + F ++ G S + + G + A + G A + DK +S L L +A E NL EAL GA+V+W EN+ TPL A R G V FL+QNGANV +RD L AT H V LK Sbjct: 418 NAACCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDSWEPELLKLMCELGNGVINRIYEAKLEKVGVKKPQPGSQRQEKEAYIRAKYVERKFVERQPVSVSLLESGTKVLPQSQEEKRHSGPEKSLLAGEQGAASLKEGDKQESSVFCDSKQSSPGLQLYRAAFEKNLPDMAEALAHGAEVNWVNVEENKA--TPLIQAVRGGSLVT--CEFLLQNGANVNIRDMKGRGPLHHATVLGHTGQVCLFLK 672 The following BLAST results are available for this feature:
BLAST of EWM24918.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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