EWM24932.1, cds5740 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24932.1 vs. NCBI_GenBank
Match: gi|585106562|gb|EWM24932.1| (hypothetical protein Naga_100086g5 [Nannochloropsis gaditana]) HSP 1 Score: 1017.68 bits (2630), Expect = 0.000e+0 Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0
Query: 1 MAVVSNKVGGSKRKVTSPPSAITARTNPKKSNTLSKTDEAQTTADKLTLPPSRVDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLPQYLIKKPGALGIGQAVHAQLEGNEPGEEGEEGEGKRALLTVKALENRGKKRGPPVSEAKESSAKKTGHKGSSLAPRTDAAKSSQRGLPLDPKSKLSGGEMKTSVVTKGAIAESGAAKVVGDASGRPNRTGETVAAAKKRARQEDGAAAVALLASRAQTGGKIRGGKAEVESLETGPVPRKGKKVVVAESEGKGKAKKKNRI 509
MAVVSNKVGGSKRKVTSPPSAITARTNPKKSNTLSKTDEAQTTADKLTLPPSRVDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLPQYLIKKPGALGIGQAVHAQLEGNEPGEEGEEGEGKRALLTVKALENRGKKRGPPVSEAKESSAKKTGHKGSSLAPRTDAAKSSQRGLPLDPKSKLSGGEMKTSVVTKGAIAESGAAKVVGDASGRPNRTGETVAAAKKRARQEDGAAAVALLASRAQTGGKIRGGKAEVESLETGPVPRKGKKVVVAESEGKGKAKKKNRI
Sbjct: 1 MAVVSNKVGGSKRKVTSPPSAITARTNPKKSNTLSKTDEAQTTADKLTLPPSRVDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLPQYLIKKPGALGIGQAVHAQLEGNEPGEEGEEGEGKRALLTVKALENRGKKRGPPVSEAKESSAKKTGHKGSSLAPRTDAAKSSQRGLPLDPKSKLSGGEMKTSVVTKGAIAESGAAKVVGDASGRPNRTGETVAAAKKRARQEDGAAAVALLASRAQTGGKIRGGKAEVESLETGPVPRKGKKVVVAESEGKGKAKKKNRI 509
BLAST of EWM24932.1 vs. NCBI_GenBank
Match: gi|298714045|emb|CBJ27277.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 201.445 bits (511), Expect = 2.470e-56 Identity = 109/254 (42.91%), Postives = 153/254 (60.24%), Query Frame = 0
Query: 54 VDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRL 307
D Q RA ALL+H + +S KQ L+ E G+ +L QI+L KIP V KPVP+++PHPL ED +CLIVK++ K ++ ++G+ +++ L +LRT YK+F++RR+L FDLFL DDRILP+L KALGKTF KK PV +KL + A+ K+I A+ L +HG+C +VK+A TS + V N++ G+ A VE P KWKNV AI++K S SVALP+Y +
Sbjct: 4 FDEAQVRRAARALLKH------VNSSAAGKQSLIEDE-GEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKR-----EDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKL--------ERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVYSNI 237
BLAST of EWM24932.1 vs. NCBI_GenBank
Match: gi|1173943772|gb|OQR92582.1| (hypothetical protein ACHHYP_03487 [Achlya hypogyna]) HSP 1 Score: 168.318 bits (425), Expect = 1.190e-43 Identity = 95/257 (36.96%), Postives = 145/257 (56.42%), Query Frame = 0
Query: 53 RVDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLPQ 309
++D Q TRAV AL ++ A+ AS +KQ L+ E I + + A IP + S K +P+ LPH + G CL VK++DK +++ AL + + G+ +V+G+++L+ + +F++RR+L+ +F FL DDR+LP L LGK FF KK P+ + + G S+P A G T ++ + G C +VKVA A V N+L+G EA V P WKN+ +IS+KT+ SVALP+Y LP
Sbjct: 3 QLDRDQVTRAVGALKEYLAK----AASANAKQALV--EDAKVISLIVTRATIPPKGSLKAIPIPLPHSIQADGD-------ACLFVKDADKKRIKEALASDPVAGLTKVMGIKKLKKHFGQFKDRRELKASFATFLADDRVLPYLKSLLGKPFFEAKKQPITVHVSGKNVSDPVRRALAG---------TAMFVSTGPCFNVKVAHDGLDTAAIVENILSGTEAVVSYVPKGWKNIKSISIKTNDSVALPIYNALPN 237
BLAST of EWM24932.1 vs. NCBI_GenBank
Match: gi|397621099|gb|EJK66104.1| (hypothetical protein THAOC_12993 [Thalassiosira oceanica]) HSP 1 Score: 169.859 bits (429), Expect = 1.553e-43 Identity = 104/276 (37.68%), Postives = 156/276 (56.52%), Query Frame = 0
Query: 46 KLTLPPSRVDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDD----DEDHA----VCLIVKESDKGKVQRALNAM--KMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLPQYL 311
K+ P V+ RA+ ALL+H H+A SK LL E + +Q LA+IP R SPKP+ + +PH L GD +ED+ C+IVKE K VQ + ++ +++V+GLQ LRT +K F +RR+L FD+F DDRILP+L KALG FF KKK P+ +KL + +A+ + ++ + + T +Y + G C++VK T+ ++ + N++A P KW NV +IS+KTSSSV+LP+Y++ PQ L
Sbjct: 4 KIIGPTVGVEEALTDRALRALLKH---HEAT----SSKDQLLGDELD--VQVQFGLARIP-RGSPKPIRIEIPHSLVKVDGDGQEGGNEDYIREVDACIIVKEESKPWVQELIARFPSELGCIKKVLGLQSLRTKHKSFTQRRELLARFDVFFADDRILPMLTKALGGKFFEKKKQPIPVKL-----TRKEALPFMIQKCLKS---TFMYLSAGTCITVKAGNTAMPSSKLLDNIVAVCAEVPTKVPRKWANVGSISIKTSSSVSLPIYKKTPQEL 261
BLAST of EWM24932.1 vs. NCBI_GenBank
Match: gi|1026981336|ref|XP_016609187.1| (hypothetical protein SPPG_04240 [Spizellomyces punctatus DAOM BR117] >gi|907095483|gb|KND01148.1| hypothetical protein SPPG_04240 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 166.392 bits (420), Expect = 1.654e-43 Identity = 94/293 (32.08%), Postives = 157/293 (53.58%), Query Frame = 0
Query: 54 VDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLPQYLIKKPGALGIGQAVHAQLEGNEPGEEGEEGEGKRAL 346
+D Q ++AV AL+ + + QA + S++ K +L+ +A +L+ +A K+P+R+ KP + L HPL+ VCLI K+ + + L + + G+ +V+G+ +LR +K ++ +RQL ++DLFL D+R++PLL +GKTFF+KKKHP + L + I +A T+L N+G C +VK+ T F + + NV+ + + P KW N+++I +KT+ S+ALP++ LP G +G GEE EEG K A+
Sbjct: 3 LDEQQVSKAVRALMAYEKKSQA-IQSEEQKTNLIEEDASKSVLVIVATKKMPDRLRLKPQRILLKHPLYAESD-------VCLITKDPQRT-YKDLLQSKAVTGISKVMGISKLRAKFKPYEAKRQLCASYDLFLADERVIPLLPSLIGKTFFAKKKHPAPVDLTK---------NDLAGEIQSALHSTYLITNNGVCNAVKIGTTRFDEEQLIENVMQAVSEIAKKIPKKWNNILSIHLKTTDSIALPIFNSLPD------GPVG-------------DGEEVEEGIKKEAV 258
BLAST of EWM24932.1 vs. NCBI_GenBank
Match: gi|1183403381|gb|ORY27971.1| (ribosomal protein L1 [Neocallimastix californiae]) HSP 1 Score: 162.155 bits (409), Expect = 1.163e-42 Identity = 89/258 (34.50%), Postives = 146/258 (56.59%), Query Frame = 0
Query: 54 VDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIP-ERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKL--GGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLP 308
++ Q +A ALL++ + K DLLA E+ ++++ + KIP E KP+ + L +P++ D+D VCLI K+ + + + L + + +V+G+ +L+ YK ++ +RQL +++D+FL DDR++P+L K +GK+F+ KKK+PV +K+ G LL K I A T+ + N G C S+K+ T+ P E N++ I VE PGKWKN+ +S+KT+ SVALP+Y LP
Sbjct: 3 LNEAQVNKATSALLKYFESTK--------KNDLLADESPVWLVL---VTKIPPENSKVKPIRIPLKYPIY------DKDTEVCLITKDP-QSEYKEMLKEQGITSINKVIGVTKLKKKYKPYEAKRQLCNSYDIFLSDDRVIPILPKLIGKSFYEKKKNPVPIKMKKGSLL-----------KEITNALNSTYYFVNSGGCSSIKIGLTNQTPEEIAENIMYSINYIVEKVPGKWKNIQRLSIKTNKSVALPIYSSLP 231
BLAST of EWM24932.1 vs. NCBI_GenBank
Match: gi|1183360170|gb|ORX87550.1| (ribosomal protein L1 [Anaeromyces robustus]) HSP 1 Score: 161.384 bits (407), Expect = 4.404e-42 Identity = 87/258 (33.72%), Postives = 139/258 (53.88%), Query Frame = 0
Query: 53 RVDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKL--GGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLP 308
++ +Q +A ALL+ K K DLLA E+ ++++ + PE KP+ + L +P++ D VCLI K+ + + + L + + +V+G+ +L+ YK ++ +RQL +++D+FL DDRI+P+L K +GK+F+ KKK PV +KL G LL K I T + N G C S+K+ T+ P E N++ I VE PGKWKN+ +S+KT+ S+ALP+Y LP
Sbjct: 2 ELNESQVNKATSALLEF--------FEKTKKNDLLADESPVWLVLSTKIP--PENSKVKPIKIPLKYPIYNKNSD------VCLITKDP-QSEYKEMLKEQGITNISKVIGVTKLKKKYKPYEAKRQLCNSYDIFLADDRIIPILPKLIGKSFYDKKKQPVPIKLKKGILL-----------KEITNVLNSTFYFVNSGGCSSIKIGLTNQTPQEIAENIMYSINYIVEKVPGKWKNIQRLSIKTNKSIALPIYSSLP 231
BLAST of EWM24932.1 vs. NCBI_GenBank
Match: gi|302845515|ref|XP_002954296.1| (hypothetical protein VOLCADRAFT_82719 [Volvox carteri f. nagariensis] >gi|300260501|gb|EFJ44720.1| hypothetical protein VOLCADRAFT_82719 [Volvox carteri f. nagariensis]) HSP 1 Score: 159.458 bits (402), Expect = 1.214e-41 Identity = 96/257 (37.35%), Postives = 144/257 (56.03%), Query Frame = 0
Query: 58 QATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERV-SPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGK-----VQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLP 308
Q +AV++LL++ V +K K + L + + +Q+AL K+P + KPVPL +PHPL+ + G + +CL VK++ G+ ++ K GV +V+G +LRT Y+ ++ +R+L +FDLFL DDRILP L K +GK+FF KKK PV + L A I A T+L++ G +++KV +SF + N+LA + AAVE P KW N+ + +KT SVALPLYQ LP
Sbjct: 30 QVKKAVQSLLKY-------VGQRKEKTNALFDDE-EVFYMQLALKKMPMQPRKDKPVPLPIPHPLYTTDGQE-----ICLFVKDTPDGQGGKEAKKKLAKLEKNGGVAKVIGTTKLRTKYESYEAKRKLCKSFDLFLADDRILPSLPKLIGKSFFKKKKQPVPINL---------RKANWAAEIKKACACTYLFKGTGTSVNIKVGLSSFSTKQVQENILAALCAAVEHIPKKWSNIQGVFLKTPDSVALPLYQTLP 264
BLAST of EWM24932.1 vs. NCBI_GenBank
Match: gi|1183315554|gb|ORX45446.1| (ribosomal protein L1 [Piromyces finnis]) HSP 1 Score: 159.073 bits (401), Expect = 1.261e-41 Identity = 86/257 (33.46%), Postives = 144/257 (56.03%), Query Frame = 0
Query: 54 VDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKL--GGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLP 308
++ Q +A ALL++ + K DLLA ++ ++++ + +P+ KP+ + L +P+ DE+ VCLI K+ + + + L + + + +V+G+ +L+ YK ++ +RQL ++D+FL DDRI+P++ K +GKTF+ KKK PV +K+ G LL K I A T+ + N+G C S+KV TS P + N++ I V+ PGKWKN+ +S+KT+ SVALP+Y LP
Sbjct: 3 LNEAQVNKATSALLKYFESTK--------KNDLLADDSPVWLVLSTKI--LPDNSRVKPIKIPLKYPIF------DENSEVCLITKDP-QSEYKEMLKELGITRINKVIGVTKLKKKYKPYEAKRQLCSSYDIFLADDRIIPIVPKLIGKTFYEKKKQPVPIKMKKGVLL-----------KEITNALNSTYFFVNNGGCSSIKVGLTSQTPEQIAENIMYSINYIVDKVPGKWKNIQRLSIKTNKSVALPIYSSLP 231
BLAST of EWM24932.1 vs. NCBI_GenBank
Match: gi|669155392|ref|XP_008613258.1| (hypothetical protein SDRG_09122 [Saprolegnia diclina VS20] >gi|530734893|gb|EQC33135.1| hypothetical protein SDRG_09122 [Saprolegnia diclina VS20]) HSP 1 Score: 160.999 bits (406), Expect = 2.746e-41 Identity = 90/257 (35.02%), Postives = 145/257 (56.42%), Query Frame = 0
Query: 53 RVDATQATRAVEALLQHNARHQALVASKKSKQDLLASEAGDYILIQIALAKIPERVSPKPVPLSLPHPLHGSGGDDDEDHAVCLIVKESDKGKVQRALNAMKMDGVREVVGLQELRTDYKEFQERRQLRDAFDLFLVDDRILPLLGKALGKTFFSKKKHPVALKLGGLLSSNPQAMATVGKRIIAAQQRTHLYRNHGNCLSVKVAKTSFRPAEAVANVLAGIEAAVEATPGKWKNVMAISVKTSSSVALPLYQRLPQ 309
+VD Q T+AVEAL Q + +A A + L +A + LI + +P + S KP+ + LPH + G CL VK++DK +++ AL +DG+ +V+G+++L+ + +F++RR+L+ +F FL DDR+LP L LGKTFF KK P + + S+P +R++A T ++ + G C +VK+A ++ V N++ G E V P KWKN+ +IS+KT+ S+ALP+Y LP
Sbjct: 3 QVDREQVTKAVEALQQVLQKKRASAAKQA-----LVEDANVFSLI-VTRNTVPPKSSLKPILIDLPHSIRADGE-------ACLFVKDADKKRIKEALAQDPVDGLTKVMGIKKLKKHFGQFKDRRELKASFATFLADDRVLPYLKTLLGKTFFDAKKQPRTVDVSAKNVSDP------IRRVLAG---TAMFVSTGPCFNVKIAHDGLELSQIVDNIIDGTEIIVSYVPKKWKNIKSISIKTNDSMALPIYNALPN 237 The following BLAST results are available for this feature:
BLAST of EWM24932.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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